assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900638305.1_57043_C01	LR134506	Porphyromonas cangingivalis strain NCTC12856 genome assembly, chromosome: 1	2	1441572-1443754	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	Type I-U, Type I-U?,Type I-C	GTCGCAGCCCATCCGGGCTGCGTGAATTGAAAC,GTCGCAGCCCATCCGGGCTGCGTGAATTGAAAC,GTCGCAGCCCATCCGGGCTGCGTGAATTGAAAC	33,33,33	0	0	NA	NA	NA:NA:NA	32,32,32	32	TypeI-U,TypeI-U?,TypeI-C	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	NA|141aa|up_7|LR134506.1_1432425_1432848_-,NA|116aa|down_7|LR134506.1_1456913_1457261_+	NA|132aa|up_9|LR134506.1_1430457_1430853_-	pfam07610, DUF1573, Protein of unknown function (DUF1573)	NA|368aa|up_8|LR134506.1_1431006_1432110_-	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|141aa|up_7|LR134506.1_1432425_1432848_-	NA	cas3|768aa|up_6|LR134506.1_1433357_1435661_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|256aa|up_5|LR134506.1_1435674_1436442_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|594aa|up_4|LR134506.1_1436441_1438223_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|335aa|up_3|LR134506.1_1438242_1439247_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|224aa|up_2|LR134506.1_1439262_1439934_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|343aa|up_1|LR134506.1_1439930_1440959_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|LR134506.1_1440962_1441253_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|565aa|down_0|LR134506.1_1444023_1445718_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|592aa|down_1|LR134506.1_1445753_1447529_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|220aa|down_2|LR134506.1_1447729_1448389_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|441aa|down_3|LR134506.1_1449135_1450458_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|1157aa|down_4|LR134506.1_1450629_1454100_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|516aa|down_5|LR134506.1_1454849_1456397_-	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|115aa|down_6|LR134506.1_1456527_1456872_-	pfam05164, ZapA, Cell division protein ZapA	NA|116aa|down_7|LR134506.1_1456913_1457261_+	NA	NA|621aa|down_8|LR134506.1_1457544_1459407_+	PRK00955, PRK00955, YgiQ family radical SAM protein	NA|604aa|down_9|LR134506.1_1459416_1461228_-	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
GCA_900638305.1_57043_C01	LR134506	Porphyromonas cangingivalis strain NCTC12856 genome assembly, chromosome: 1	3	1551968-1552815	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	Orphan	GTCTTAATAGTCTTAATGACTGAATATGTATAGATAG,GTCTTAATAGTCTTAATGACTGAATATGTATAGATAGA,TCTTAATAGTCTTAATGACTGAATATGTATAGATAG	37,38,36	0	0	NA	NA	NA:NA:NA	11,11,10	11	Orphan	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	NA|776aa|up_4|LR134506.1_1545629_1547957_+,NA|212aa|down_6|LR134506.1_1561502_1562138_+	NA|435aa|up_9|LR134506.1_1540873_1542178_+	PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional	NA|390aa|up_8|LR134506.1_1542170_1543340_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|224aa|up_7|LR134506.1_1543342_1544014_+	COG2830, COG2830, Uncharacterized protein conserved in bacteria [Function unknown]	NA|253aa|up_6|LR134506.1_1544010_1544769_+	TIGR02072, Malonyl-_O-methyltransferase, malonyl-acyl carrier protein O-methyltransferase BioC	NA|239aa|up_5|LR134506.1_1544805_1545522_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|776aa|up_4|LR134506.1_1545629_1547957_+	NA	NA|393aa|up_3|LR134506.1_1547980_1549159_+	pfam13905, Thioredoxin_8, Thioredoxin-like	NA|253aa|up_2|LR134506.1_1549173_1549932_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|205aa|up_1|LR134506.1_1549953_1550568_+	sd00037, PASTA, PASTA domain	NA|360aa|up_0|LR134506.1_1550590_1551670_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|927aa|down_0|LR134506.1_1553576_1556357_+	PLN02563, PLN02563, aminoacyl-tRNA ligase	NA|295aa|down_1|LR134506.1_1556396_1557281_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|195aa|down_2|LR134506.1_1557280_1557865_+	PRK14823, PRK14823, putative deoxyribonucleoside-triphosphatase; Provisional	NA|283aa|down_3|LR134506.1_1558109_1558958_+	PRK11525, dinD, DNA-damage-inducible protein D; Provisional	NA|490aa|down_4|LR134506.1_1559007_1560477_+	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|80aa|down_5|LR134506.1_1560524_1560764_+	pfam02609, Exonuc_VII_S, Exonuclease VII small subunit	NA|212aa|down_6|LR134506.1_1561502_1562138_+	NA	NA|422aa|down_7|LR134506.1_1562277_1563543_-	pfam11013, DUF2851, Protein of unknown function (DUF2851)	NA|942aa|down_8|LR134506.1_1563561_1566387_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|1066aa|down_9|LR134506.1_1566970_1570168_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family
GCA_900638305.1_57043_C01	LR134506	Porphyromonas cangingivalis strain NCTC12856 genome assembly, chromosome: 1	4	1887666-1888949	3,4,3,5	PILER-CR,CRISPRCasFinder,CRT,CRISPRCasFinder	no	cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	Type III-A,Type III-C,Type III-D,Type III-B	GTCTTAATAGTCTTAATGACTGAATATGTATAGATAG,CTATCTATACATATTCAGTCATTAAGACTATTAAGAC,TACATATTCAGTCATTAAGACTATTAAGAC,CTATCTATACATATTCAGTCATTAAGACTATTAAGAC	37,37,30,37	0	0	NA	NA	NA:NA:NA:NA	16,15,17,15	17	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	NA|129aa|up_9|LR134506.1_1876064_1876451_+,NA|561aa|down_0|LR134506.1_1889326_1891009_+,NA|64aa|down_1|LR134506.1_1891018_1891210_+,cmr1gr7|427aa|down_2|LR134506.1_1891274_1892555_+,cmr5gr11|166aa|down_6|LR134506.1_1895869_1896367_+	NA|129aa|up_9|LR134506.1_1876064_1876451_+	NA	NA|206aa|up_8|LR134506.1_1876511_1877129_+	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|843aa|up_7|LR134506.1_1877593_1880122_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|224aa|up_6|LR134506.1_1880310_1880982_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|341aa|up_5|LR134506.1_1880982_1882005_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|213aa|up_4|LR134506.1_1882382_1883021_-	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain	NA|166aa|up_3|LR134506.1_1883329_1883827_+	PRK00522, tpx, thiol peroxidase	NA|494aa|up_2|LR134506.1_1884037_1885519_+	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional	NA|90aa|up_1|LR134506.1_1885661_1885931_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|295aa|up_0|LR134506.1_1886113_1886998_-	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]	NA|561aa|down_0|LR134506.1_1889326_1891009_+	NA	NA|64aa|down_1|LR134506.1_1891018_1891210_+	NA	cmr1gr7|427aa|down_2|LR134506.1_1891274_1892555_+	NA	cas10|496aa|down_3|LR134506.1_1892551_1894039_+	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	cmr3gr5|383aa|down_4|LR134506.1_1894040_1895189_+	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3	cmr4gr7|223aa|down_5|LR134506.1_1895200_1895869_+	cd09682, Cmr4_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr4	cmr5gr11|166aa|down_6|LR134506.1_1895869_1896367_+	NA	cmr6gr7|259aa|down_7|LR134506.1_1896366_1897143_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cas1|674aa|down_8|LR134506.1_1897190_1899212_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|119aa|down_9|LR134506.1_1899150_1899507_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2
GCA_900638305.1_57043_C01	LR134506	Porphyromonas cangingivalis strain NCTC12856 genome assembly, chromosome: 1	5	1899984-1900754	4,6,4	PILER-CR,CRISPRCasFinder,CRT	no	cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	Type III-A,Type III-C,Type III-D,Type III-B	GTCTTAATAGTCTTACTGACTGTCTTTGTATAGATAC,GTATCTATACAAAGACAGTCAGTAAGACTATTAAGAC,GTATCTATACAAAGACAGTCAGTAAGACTATTAAGAC	37,37,37	0	0	NA	NA	NA:NA:NA	9,10,10	10	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	NA|561aa|up_9|LR134506.1_1889326_1891009_+,NA|64aa|up_8|LR134506.1_1891018_1891210_+,cmr1gr7|427aa|up_7|LR134506.1_1891274_1892555_+,cmr5gr11|166aa|up_3|LR134506.1_1895869_1896367_+,NA|278aa|down_3|LR134506.1_1904559_1905393_+,NA|74aa|down_6|LR134506.1_1907950_1908172_+	NA|561aa|up_9|LR134506.1_1889326_1891009_+	NA	NA|64aa|up_8|LR134506.1_1891018_1891210_+	NA	cmr1gr7|427aa|up_7|LR134506.1_1891274_1892555_+	NA	cas10|496aa|up_6|LR134506.1_1892551_1894039_+	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	cmr3gr5|383aa|up_5|LR134506.1_1894040_1895189_+	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3	cmr4gr7|223aa|up_4|LR134506.1_1895200_1895869_+	cd09682, Cmr4_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr4	cmr5gr11|166aa|up_3|LR134506.1_1895869_1896367_+	NA	cmr6gr7|259aa|up_2|LR134506.1_1896366_1897143_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cas1|674aa|up_1|LR134506.1_1897190_1899212_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|119aa|up_0|LR134506.1_1899150_1899507_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|442aa|down_0|LR134506.1_1901250_1902576_+	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|313aa|down_1|LR134506.1_1902596_1903535_+	cd07984, LPLAT_LABLAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	NA|341aa|down_2|LR134506.1_1903531_1904554_+	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|278aa|down_3|LR134506.1_1904559_1905393_+	NA	NA|240aa|down_4|LR134506.1_1905529_1906249_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|547aa|down_5|LR134506.1_1906303_1907944_+	PRK15389, PRK15389, fumarate hydratase; Provisional	NA|74aa|down_6|LR134506.1_1907950_1908172_+	NA	NA|581aa|down_7|LR134506.1_1908193_1909936_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|216aa|down_8|LR134506.1_1910389_1911037_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|195aa|down_9|LR134506.1_1911554_1912139_+	pfam12099, DUF3575, Protein of unknown function (DUF3575)
