The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	498579	506236	4867355		Thermobifida_phage(16.67%)	10	NA	NA
VEI39962.1|498579_499434_-	ATPase	NA	A0A0R8VB27	Thermobifida_phage	28.4	1.4e-05
VEI39963.1|499479_499971_-	PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA	NA
VEI39964.1|500054_500342_-	putative sigma(54) modulation protein	NA	A0A0M7QCF2	Escherichia_phage	43.2	5.5e-10
VEI39965.1|500364_501798_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
VEI39966.1|501844_502570_-	putative ABC transporter ATP-binding protein YhbG	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	5.4e-22
VEI39967.1|502576_503131_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
VEI39968.1|503099_503675_-	organic solvent tolerance protein	NA	NA	NA	NA	NA
VEI39969.1|503671_504238_-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	A0A140XBD6	Dickeya_phage	76.3	4.2e-54
VEI39970.1|504258_505245_-	D-arabinose 5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	31.5	1.5e-38
VEI39971.1|505258_506236_-	putative calcium/sodium:proton antiporter	NA	A0A2D1GNI8	Pseudoalteromonas_phage	22.3	2.1e-05
>prophage 2
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	1138866	1162814	4867355	integrase,transposase,protease	Shigella_phage(40.0%)	26	1135964:1135978	1173612:1173626
1135964:1135978	attL	TGTTGCCGGGTTGAT	NA	NA	NA	NA
VEI40571.1|1138866_1139145_+|transposase	ISEc14 transposase A	transposase	U5P4I9	Shigella_phage	91.2	3.4e-33
VEI40572.1|1139621_1140014_+|transposase	ISEc14 transposase B	transposase	U5P429	Shigella_phage	96.2	5.6e-66
VEI40573.1|1139976_1141044_+	Transposase DDE domain	NA	A0A077K814	Ralstonia_phage	57.3	6.6e-93
VEI40574.1|1141268_1142420_-|protease	serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.3	9.9e-26
VEI40575.1|1142444_1143023_-	Protease HtpX homolog	NA	NA	NA	NA	NA
VEI40576.1|1143150_1143414_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI40577.1|1143391_1143889_-	Predicted membrane protein	NA	NA	NA	NA	NA
VEI40578.1|1143885_1145601_-	glutathione-regulated potassium-efflux system protein KefB	NA	NA	NA	NA	NA
VEI40579.1|1145604_1146045_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	37.2	4.5e-11
VEI40580.1|1146034_1147180_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI40581.1|1147259_1147871_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEI40582.1|1147960_1148848_-	YfdX protein	NA	NA	NA	NA	NA
VEI40583.1|1148950_1149865_-	YfdX protein	NA	NA	NA	NA	NA
VEI40584.1|1149887_1150346_-	heat shock protein	NA	NA	NA	NA	NA
VEI40585.1|1150433_1152011_-|protease	ATP-dependent metalloprotease	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	44.0	2.3e-97
VEI40586.1|1152071_1152263_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI40587.1|1152262_1155112_-	protein disaggregation chaperone	NA	K4FB40	Cronobacter_phage	41.2	1.5e-128
VEI40588.1|1155217_1155787_-	Spore protein SP21	NA	NA	NA	NA	NA
VEI40589.1|1155821_1156103_-	DNA binding domain, excisionase family	NA	NA	NA	NA	NA
VEI40590.1|1156895_1157198_+|transposase	ISEc14 transposase A	transposase	Q716C1	Shigella_phage	90.0	4.8e-41
VEI40591.1|1157410_1157860_+	Uncharacterised protein	NA	Q716C2	Shigella_phage	89.1	5.6e-17
VEI40592.1|1157915_1158536_-	Protein of uncharacterised function (DUF3296)	NA	NA	NA	NA	NA
VEI40593.1|1158777_1159929_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI40594.1|1160297_1160510_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEI40595.1|1160635_1161514_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI40596.1|1161572_1162814_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	48.3	6.7e-105
1173612:1173626	attR	TGTTGCCGGGTTGAT	NA	NA	NA	NA
>prophage 3
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	1788606	1856349	4867355	terminase,protease,plate,integrase,portal,tRNA,tail	Escherichia_phage(30.95%)	86	1776113:1776128	1790031:1790046
1776113:1776128	attL	TGGCTCCTCTGACTGG	NA	NA	NA	NA
VEI41156.1|1788606_1789869_-|integrase	integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	40.2	1.5e-72
VEI41157.1|1790432_1791350_+	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA	NA
1790031:1790046	attR	TGGCTCCTCTGACTGG	NA	NA	NA	NA
VEI41158.1|1791451_1792402_+	transcriptional regulator Cbl	NA	NA	NA	NA	NA
VEI41159.1|1792619_1793417_-	Mlc titration factor A	NA	NA	NA	NA	NA
VEI41160.1|1793666_1794743_-	Site-specific recombinase XerD	NA	A0A192Y7M7	Salmonella_phage	55.5	2.4e-98
VEI41161.1|1794684_1794927_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41162.1|1794997_1797478_-	prophage exonuclease	NA	K7P6V4	Enterobacteria_phage	39.7	3.0e-112
VEI41163.1|1797619_1797946_-	DNA-binding transcriptional regulator IscR	NA	NA	NA	NA	NA
VEI41164.1|1798437_1798818_-	transcriptional repressor DicA	NA	K7PH71	Enterobacterial_phage	66.7	6.5e-19
VEI41165.1|1798923_1799136_+	putative zinc finger/helix-turn-helix protein, YgiT family	NA	A0A077K9X2	Edwardsiella_phage	59.7	3.8e-16
VEI41166.1|1799139_1799694_+	Protein of uncharacterised function (DUF1019)	NA	M9NZI6	Enterobacteria_phage	33.5	1.4e-14
VEI41167.1|1799946_1800858_+	primosomal protein I	NA	A0A0U2RT81	Escherichia_phage	54.8	1.1e-48
VEI41168.1|1800904_1801315_+	Uncharacterised protein	NA	A0A0U2JGJ0	Escherichia_phage	77.6	6.3e-60
VEI41169.1|1801330_1801747_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41170.1|1801752_1802124_+	Bacterial protein of uncharacterised function (DUF977)	NA	H6WRX9	Salmonella_phage	46.7	1.1e-15
VEI41171.1|1802425_1803280_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41172.1|1803279_1804710_-	Predicted ATP-binding protein involved in virulence	NA	NA	NA	NA	NA
VEI41173.1|1805298_1805529_+	damage-inducible protein	NA	K7PM44	Enterobacteria_phage	82.9	8.5e-30
VEI41174.1|1805577_1805823_+	Uncharacterised protein	NA	H6WRY6	Salmonella_phage	62.2	1.7e-20
VEI41175.1|1805865_1805955_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41176.1|1805951_1806152_+	Uncharacterised protein	NA	H6WRY8	Salmonella_phage	58.5	6.7e-15
VEI41177.1|1806154_1806514_+	Holliday junction resolvase	NA	G8C7V6	Escherichia_phage	64.4	6.8e-42
VEI41178.1|1806510_1807062_+	Protein of uncharacterised function (DUF968)	NA	A0A1C9IHZ5	Salmonella_phage	44.8	3.4e-40
VEI41179.1|1807016_1807550_+	Protein of uncharacterised function (DUF968)	NA	S5MW46	Escherichia_phage	52.0	2.8e-44
VEI41180.1|1807561_1807915_+	Phage antitermination protein Q	NA	A0A0P0ZCW0	Stx2-converting_phage	81.4	9.9e-54
VEI41181.1|1807927_1808881_-	prophage DNA adenine methylase	NA	NA	NA	NA	NA
VEI41182.1|1808922_1810485_-	Uncharacterised protein	NA	Q858T2	Yersinia_virus	33.5	2.5e-11
VEI41183.1|1810701_1810908_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41184.1|1810910_1811093_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41185.1|1811477_1811864_+	prophage membrane protein	NA	A0A192Y8P2	Salmonella_phage	93.0	6.2e-57
VEI41186.1|1811850_1812132_+	prophage membrane protein	NA	A0A0U2SHD1	Escherichia_phage	47.1	1.6e-17
VEI41187.1|1812287_1812902_+	Predicted chitinase	NA	Q8HA86	Salmonella_phage	81.9	3.8e-93
VEI41188.1|1812909_1813179_+	Uncharacterised protein	NA	G8C7W1	Escherichia_phage	72.4	2.0e-22
VEI41189.1|1813404_1813914_-	Inner membrane protein yabI	NA	NA	NA	NA	NA
VEI41190.1|1814096_1814744_+	Uncharacterised protein	NA	K7P6W1	Enterobacteria_phage	77.2	1.6e-57
VEI41191.1|1814744_1815104_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41192.1|1815260_1815602_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41193.1|1815827_1816334_+	Protein of uncharacterised function (DUF1441)	NA	K7PJY2	Enterobacterial_phage	62.5	9.0e-48
VEI41194.1|1816337_1818455_+|terminase	phage terminase large subunit	terminase	A0A291AWY5	Escherichia_phage	70.6	1.2e-306
VEI41195.1|1818451_1818667_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41196.1|1818675_1820187_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	55.9	2.1e-156
VEI41197.1|1820143_1822549_+|protease	ATP-dependent clp protease proteolytic subunit	protease	S5M7Q8	Escherichia_phage	52.4	2.0e-198
VEI41198.1|1822652_1823009_+	Phage Head-Tail Attachment	NA	NA	NA	NA	NA
VEI41199.1|1823010_1823667_+	Uncharacterised protein	NA	D5LGZ7	Escherichia_phage	35.8	2.4e-16
VEI41200.1|1823678_1824233_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41201.1|1824225_1824843_+|tail	phage tail spike protein	tail	Q9JML8	Wolbachia_phage	37.0	1.0e-13
VEI41202.1|1824882_1826352_+|tail	phage tail sheath protein	tail	R9TMQ0	Vibrio_phage	37.5	3.0e-75
VEI41203.1|1826348_1826855_+|tail	phage major tail tube protein	tail	NA	NA	NA	NA
VEI41204.1|1826913_1827213_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41205.1|1827315_1829016_+	Uncharacterised protein	NA	A0A2I7R3J9	Vibrio_phage	31.4	1.9e-25
VEI41206.1|1829012_1829408_+|tail	phage tail protein	tail	D4HTW5	Vibrio_phage	38.1	1.8e-11
VEI41207.1|1829464_1829680_+	Phage Tail Protein X	NA	R9TR63	Vibrio_phage	52.9	9.7e-12
VEI41208.1|1829681_1830800_+|tail	phage tail protein	tail	R9TNM7	Vibrio_phage	32.6	4.7e-33
VEI41209.1|1830839_1831193_+|plate	phage baseplate assembly protein W	plate	R9TRM1	Vibrio_phage	55.1	1.7e-21
VEI41210.1|1831176_1832097_+|plate	phage baseplate assembly protein J	plate	A0A088FQL4	Escherichia_phage	49.5	1.7e-65
VEI41211.1|1832086_1832650_+|tail	phage tail protein	tail	A0A0F7LDF3	Escherichia_phage	40.3	2.4e-25
VEI41212.1|1832642_1833932_+|tail	phage tail fiber protein	tail	Q37842	Escherichia_phage	40.0	2.7e-72
VEI41213.1|1833935_1834451_+|tail	phage tail fiber assembly protein	tail	Q37843	Escherichia_phage	75.3	5.7e-66
VEI41214.1|1834688_1835303_-	Inner membrane protein yagU	NA	NA	NA	NA	NA
VEI41215.1|1835689_1836064_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41216.1|1836662_1837844_-	Outer membrane porin protein	NA	Q1MVN1	Enterobacteria_phage	56.3	8.6e-110
VEI41217.1|1838283_1838979_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.5	5.6e-08
VEI41218.1|1839082_1840483_+	DNA cytosine methylase	NA	E5E3X6	Burkholderia_phage	55.2	5.4e-103
VEI41219.1|1840463_1840931_+	patch repair protein	NA	E5E3X5	Burkholderia_phage	45.6	1.7e-32
VEI41220.1|1840922_1841843_-	amino acid metabolite efflux	NA	NA	NA	NA	NA
VEI41221.1|1842021_1842933_+	Inner membrane protein yedI	NA	NA	NA	NA	NA
VEI41222.1|1843010_1843193_+	Uncharacterized small protein	NA	NA	NA	NA	NA
VEI41223.1|1843399_1843627_-	Protein of uncharacterised function (DUF2525)	NA	NA	NA	NA	NA
VEI41224.1|1843789_1843978_+	DsrB protein	NA	NA	NA	NA	NA
VEI41225.1|1844025_1844649_-	colanic acid capsullar biosynthesis activation protein A	NA	NA	NA	NA	NA
VEI41226.1|1844936_1845500_-	flagellar biosynthesis protein FliR	NA	NA	NA	NA	NA
VEI41227.1|1845538_1845721_-	flagellar biosynthesis protein FliR	NA	NA	NA	NA	NA
VEI41228.1|1845729_1845999_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
VEI41229.1|1846008_1846746_-	flagellar biosynthesis protein FliP	NA	NA	NA	NA	NA
VEI41230.1|1846745_1847120_-	flagellar biosynthesis protein FliO	NA	NA	NA	NA	NA
VEI41231.1|1847122_1847536_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
VEI41232.1|1847532_1848537_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
VEI41233.1|1848541_1849009_-	flagellar protein FliL	NA	NA	NA	NA	NA
VEI41234.1|1849113_1850331_-	flagellar hook-length control protein	NA	NA	NA	NA	NA
VEI41235.1|1850327_1850771_-	flagellar biosynthesis chaperone	NA	NA	NA	NA	NA
VEI41236.1|1850792_1852163_-	flagellum-specific ATP synthase	NA	NA	NA	NA	NA
VEI41237.1|1852162_1852870_-	flagellar assembly protein H	NA	NA	NA	NA	NA
VEI41238.1|1852862_1853858_-	flagellar motor switch protein G	NA	NA	NA	NA	NA
VEI41239.1|1853850_1855530_-	flagellar M-ring protein	NA	NA	NA	NA	NA
VEI41240.1|1855746_1856061_+	flagellar hook-basal body protein FliE	NA	NA	NA	NA	NA
VEI41241.1|1856115_1856349_-|tRNA	sulfurtransferase (tRNA 2-thiouridine synthesizin protein A)	tRNA	NA	NA	NA	NA
>prophage 4
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	1918881	1993720	4867355	terminase,protease,capsid,head,plate,integrase,portal,tRNA,tail	Enterobacteria_phage(20.93%)	96	1919247:1919261	1933081:1933095
VEI41307.1|1918881_1920615_-|tRNA	arginyl-tRNA synthetase	tRNA	A0A2K9L6Z2	Tupanvirus	33.9	1.5e-86
1919247:1919261	attL	CGGTATTGCCTTCGA	NA	NA	NA	NA
VEI41308.1|1920853_1921420_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEI41309.1|1921422_1922169_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
VEI41310.1|1922389_1923358_-|tRNA	tRNA (mo5U34)-methyltransferase	tRNA	NA	NA	NA	NA
VEI41311.1|1923354_1924098_-|tRNA	tRNA (cmo5U34)-methyltransferase	tRNA	F5B419	Synechococcus_phage	30.9	4.1e-25
VEI41312.1|1924138_1924534_-	Inner membrane protein yecN	NA	NA	NA	NA	NA
VEI41313.1|1924586_1925312_-	Protein of uncharacterised function DUF72	NA	Q859D1	Escherichia_coli_phage	80.3	8.9e-57
VEI41314.1|1925338_1926652_-|integrase	phage integrase	integrase	Q8W658	Enterobacteria_phage	80.7	1.6e-213
VEI41315.1|1926707_1926944_-	Putative excisionase (DUF1233)	NA	Q8W657	Enterobacteria_phage	94.9	4.2e-40
VEI41316.1|1926953_1927100_-	Uncharacterised protein	NA	A0A1B5FPC2	Escherichia_phage	77.1	4.0e-17
VEI41317.1|1927099_1927411_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41318.1|1927410_1927872_-	Uncharacterised protein	NA	A0A1B5FPC7	Escherichia_phage	52.2	1.2e-43
VEI41319.1|1927930_1928080_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41320.1|1928076_1928301_-	Uncharacterised protein	NA	A0A286S2B3	Klebsiella_phage	54.1	3.0e-16
VEI41321.1|1928300_1928423_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41322.1|1928419_1928998_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41323.1|1929008_1929587_-	Uncharacterised protein	NA	A0A286S1S7	Klebsiella_phage	58.3	7.3e-62
VEI41324.1|1929583_1930006_-	Uncharacterised protein	NA	A0A286S1S2	Klebsiella_phage	67.9	7.5e-48
VEI41325.1|1930192_1930444_-	Uncharacterised protein	NA	A0A286SGR4	Klebsiella_phage	70.2	4.3e-27
VEI41326.1|1930443_1930800_-	Uncharacterised protein	NA	A0A1B5FPB3	Escherichia_phage	48.7	1.6e-22
VEI41327.1|1930805_1930919_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41328.1|1930899_1931190_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41329.1|1931251_1931671_-	Uncharacterised protein	NA	A0A1B5FPB2	Escherichia_phage	43.3	7.8e-05
VEI41330.1|1931825_1932503_-	phage repressor protein	NA	A0A1B5FPF4	Escherichia_phage	76.3	4.3e-98
VEI41331.1|1932908_1933388_+	Uncharacterised protein	NA	NA	NA	NA	NA
1933081:1933095	attR	TCGAAGGCAATACCG	NA	NA	NA	NA
VEI41332.1|1933392_1933653_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41333.1|1933701_1934550_+	KilA-N domain	NA	Q8W644	Enterobacteria_phage	65.6	1.8e-56
VEI41334.1|1934546_1935443_+	Uncharacterised protein	NA	H2DE83	Erwinia_phage	60.5	8.2e-36
VEI41335.1|1935457_1936339_+	DNA replication protein DnaC	NA	Q8W641	Enterobacteria_phage	62.0	1.5e-79
VEI41336.1|1936335_1937694_+	replicative DNA helicase	NA	Q8W640	Enterobacteria_phage	68.9	2.7e-176
VEI41337.1|1937704_1938016_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41338.1|1938012_1938795_+	Antitermination protein	NA	F1C595	Cronobacter_phage	74.1	2.2e-106
VEI41339.1|1939085_1939772_+	Uncharacterized phage-encoded protein	NA	A0A192Y918	Salmonella_phage	78.1	1.4e-99
VEI41340.1|1939923_1940421_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41341.1|1940866_1941145_+	Uncharacterised protein	NA	K7PGZ9	Enterobacteria_phage	97.8	5.1e-45
VEI41342.1|1941116_1941665_+	phage lysozyme	NA	K7PM52	Enterobacteria_phage	94.5	1.2e-98
VEI41343.1|1941863_1942118_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41344.1|1942173_1942404_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41345.1|1942788_1942992_+	Uncharacterised protein	NA	K7PHC3	Enterobacterial_phage	89.2	6.6e-26
VEI41346.1|1944484_1944616_+	GnsA/GnsB family	NA	NA	NA	NA	NA
VEI41347.1|1945587_1945827_-	Domain of uncharacterised function (DUF1883)	NA	NA	NA	NA	NA
VEI41348.1|1946004_1946643_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41349.1|1946653_1947157_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41350.1|1947447_1948017_+	prophage DNA binding protein	NA	NA	NA	NA	NA
VEI41351.1|1947958_1950082_+|terminase	phage terminase large subunit	terminase	A0A0C5ABH4	Bacteriophage	35.6	1.8e-97
VEI41352.1|1950090_1950354_+|head,tail	phage head-to-tail joining protein	head,tail	NA	NA	NA	NA
VEI41353.1|1950353_1951991_+|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	35.2	3.3e-91
VEI41354.1|1951987_1952854_+|protease	protease	protease	A0A2D1GN02	Marinobacter_phage	37.9	4.8e-49
VEI41355.1|1952855_1953446_+	prophage protein	NA	NA	NA	NA	NA
VEI41356.1|1953445_1953850_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41357.1|1953947_1954997_+|capsid	phage capsid protein	capsid	V5Q8G6	Xylella_phage	33.7	1.6e-51
VEI41358.1|1954968_1955379_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41359.1|1955383_1955743_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41360.1|1955739_1956285_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41361.1|1956288_1956486_+	Protein of uncharacterised function (DUF2635)	NA	NA	NA	NA	NA
VEI41362.1|1956482_1957985_+|tail	phage tail sheath protein	tail	B5TK67	Pseudomonas_phage	42.4	2.5e-101
VEI41363.1|1957988_1958360_+|tail	Phage tail tube protein	tail	NA	NA	NA	NA
VEI41364.1|1958361_1958640_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41365.1|1958781_1960710_+	Uncharacterised protein	NA	A0A193GYI3	Enterobacter_phage	30.3	2.6e-18
VEI41366.1|1961053_1962457_+	phage DNA circularisation protein	NA	NA	NA	NA	NA
VEI41367.1|1962453_1963539_+|plate	phage baseplate protein	plate	M1PVV2	Vibrio_phage	31.2	1.3e-43
VEI41368.1|1963577_1964120_+|plate	phage baseplate assembly protein	plate	A0A077KAY0	Edwardsiella_phage	30.8	5.9e-05
VEI41369.1|1964116_1964554_+	Phage protein GP46	NA	B5TK74	Pseudomonas_phage	45.8	4.0e-12
VEI41370.1|1964555_1965698_+|tail	phage tail protein	tail	A0A0A8WEY6	Clostridium_phage	34.8	6.2e-12
VEI41371.1|1965694_1966288_+|tail	phage tail protein	tail	NA	NA	NA	NA
VEI41372.1|1966339_1967278_+|tail	phage tail fiber protein	tail	NA	NA	NA	NA
VEI41373.1|1967296_1967701_+|tail	phage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	53.5	9.1e-11
VEI41374.1|1967672_1968074_-|tail	phage tail fiber assembly protein	tail	U5P083	Shigella_phage	41.8	1.5e-18
VEI41375.1|1968441_1968684_-	damage-inducible protein	NA	Q6UAW0	Klebsiella_phage	79.2	1.2e-29
VEI41376.1|1968762_1969095_+	Uncharacterised protein	NA	K7PGV5	Enterobacterial_phage	54.2	2.3e-20
VEI41377.1|1969286_1969697_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEI41378.1|1969782_1970022_-	damage-inducible protein	NA	K7PKR6	Enterobacteria_phage	100.0	7.4e-37
VEI41379.1|1970274_1970379_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41380.1|1970375_1970942_-	isochorismatase	NA	NA	NA	NA	NA
VEI41381.1|1971229_1973002_+|tRNA	aspartyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEI41382.1|1973003_1973447_+	dATP pyrophosphohydrolase	NA	NA	NA	NA	NA
VEI41383.1|1973475_1974219_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA	NA
VEI41384.1|1974253_1974775_+	crossover junction endodeoxyribonuclease	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
VEI41385.1|1974855_1975467_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
VEI41386.1|1975475_1975889_+	Holliday junction DNA helicase RuvB	NA	NA	NA	NA	NA
VEI41387.1|1975834_1976485_+	Holliday junction DNA helicase RuvB	NA	NA	NA	NA	NA
VEI41388.1|1976576_1977362_-	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA	NA
VEI41389.1|1977358_1978114_-	zinc import ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.4	7.2e-17
VEI41390.1|1978177_1979137_+	high-affinity zinc transporter periplasmic component	NA	NA	NA	NA	NA
VEI41391.1|1979152_1980472_+	peptidoglycan-binding peptidase	NA	A8ATH6	Listeria_phage	37.5	4.0e-15
VEI41392.1|1980593_1981565_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA	NA
VEI41393.1|1981651_1983094_-	pyruvate kinase	NA	NA	NA	NA	NA
VEI41394.1|1983213_1984107_-	hex-regulon repressor (RpiR-family transcriptional regulator)	NA	NA	NA	NA	NA
VEI41395.1|1984450_1985926_+	glucose-6-phosphate 1-dehydrogenase	NA	H6WFS4	Cyanophage	36.6	7.1e-77
VEI41396.1|1986159_1987971_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
VEI41397.1|1988005_1988647_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
VEI41398.1|1988749_1989928_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
VEI41399.1|1990059_1990350_+	DNA damage-inducible protein YebG	NA	NA	NA	NA	NA
VEI41400.1|1990471_1990825_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41401.1|1990919_1991579_+	Inner membrane protein yebE	NA	NA	NA	NA	NA
VEI41402.1|1991641_1993720_+|protease	protease II	protease	F2Y2Z7	Organic_Lake_phycodnavirus	36.3	8.3e-31
>prophage 5
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	2167716	2205263	4867355	integrase,head,coat	Enterobacteria_phage(36.59%)	53	2155601:2155615	2174402:2174416
2155601:2155615	attL	GCTTTGGTACCGGAC	NA	NA	NA	NA
VEI41577.1|2167716_2168553_+	Voltage-gated potassium channel	NA	A0A1B0Y2S3	Lactobacillus_phage	41.2	1.8e-08
VEI41578.1|2168590_2168920_-	dsDNA-mimic protein	NA	NA	NA	NA	NA
VEI41579.1|2168954_2170415_-	cardiolipin synthetase	NA	NA	NA	NA	NA
VEI41580.1|2170986_2172180_+|integrase	integrase	integrase	K7PGY1	Enterobacteria_phage	85.1	7.2e-205
VEI41581.1|2172172_2172373_-	Uncharacterised protein	NA	K7PM28	Enterobacteria_phage	82.5	3.2e-25
VEI41582.1|2172418_2172661_-	Uncharacterised protein	NA	K7PHF4	Enterobacteria_phage	89.9	2.3e-33
VEI41583.1|2172700_2173741_-	RecT family	NA	K7PKR8	Enterobacteria_phage	72.1	2.7e-147
VEI41584.1|2173755_2177043_-	Exodeoxyribonuclease 8	NA	K7P6V4	Enterobacteria_phage	72.9	0.0e+00
2174402:2174416	attR	GCTTTGGTACCGGAC	NA	NA	NA	NA
VEI41585.1|2177182_2177344_-	Uncharacterised protein	NA	K7PGY4	Enterobacteria_phage	92.5	2.0e-22
VEI41586.1|2177355_2177652_-	FtsZ inhibitor protein KilR	NA	K7PM31	Enterobacteria_phage	100.0	2.1e-33
VEI41587.1|2177947_2178145_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41588.1|2178191_2178998_-	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA	NA
VEI41589.1|2178994_2179843_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41590.1|2180015_2180411_-	transcriptional repressor DicA	NA	K7PM35	Enterobacteria_phage	72.5	5.9e-47
VEI41591.1|2180514_2180748_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	A0A0M4QX15	Salmonella_phage	59.7	1.1e-19
VEI41592.1|2180750_2181290_+	Protein of uncharacterised function (DUF1019)	NA	K7PJT7	Enterobacteria_phage	94.4	7.0e-91
VEI41593.1|2181436_2182309_+	Uncharacterised protein	NA	V5URT9	Shigella_phage	52.5	1.2e-84
VEI41594.1|2182311_2183061_+	DNA replication protein DnaC	NA	S4TNF5	Salmonella_phage	86.3	6.2e-122
VEI41595.1|2183079_2183391_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41596.1|2183387_2183753_+	Uncharacterised protein	NA	G9L6B1	Escherichia_phage	41.1	3.5e-09
VEI41597.1|2183749_2183968_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41598.1|2183969_2184458_+	Uncharacterised protein	NA	H9C170	Pectobacterium_phage	76.8	5.4e-66
VEI41599.1|2184583_2184829_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41600.1|2185945_2186371_-	glutaredoxin	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	71.4	2.5e-51
VEI41601.1|2186383_2187673_-	Arsenic efflux pump protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	70.0	7.1e-166
VEI41602.1|2187717_2188038_-	HTH-type transcriptional repressor AseR	NA	A0A2H4J145	uncultured_Caudovirales_phage	43.8	7.7e-21
VEI41603.1|2188123_2188822_+	NADPH azoreductase	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.5	5.0e-89
VEI41604.1|2189136_2189370_+	damage-inducible protein	NA	K7PM44	Enterobacteria_phage	96.1	2.8e-36
VEI41605.1|2189487_2189736_+	Uncharacterised protein	NA	K7PHG9	Enterobacteria_phage	97.6	6.8e-41
VEI41606.1|2189770_2190370_+	Protein of uncharacterised function (DUF1367)	NA	K7PKS6	Enterobacteria_phage	97.5	3.5e-107
VEI41607.1|2190369_2190576_+	Uncharacterised protein	NA	K7PJT9	Enterobacteria_phage	81.8	4.6e-27
VEI41608.1|2190587_2190815_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41609.1|2191048_2191189_+	Bacteriophage Lambda NinG protein	NA	A0A0M4RU10	Salmonella_phage	82.6	2.0e-13
VEI41610.1|2191185_2191323_+	Uncharacterised protein	NA	K7PHH3	Enterobacteria_phage	83.7	1.3e-14
VEI41611.1|2191319_2192009_+	phage antiterminator protein	NA	I6PDF8	Cronobacter_phage	55.8	3.2e-64
VEI41612.1|2192776_2193091_+	Uncharacterised protein	NA	H6WRZ3	Salmonella_phage	99.0	2.0e-50
VEI41613.1|2193093_2193633_+	phage lysozyme	NA	K7PM52	Enterobacteria_phage	94.9	3.2e-96
VEI41614.1|2193816_2194227_+	prophage protein	NA	NA	NA	NA	NA
VEI41615.1|2194316_2194733_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41616.1|2194812_2195037_+	Uncharacterised protein	NA	A0A1I9KFG9	Aeromonas_phage	56.8	2.1e-09
VEI41617.1|2194982_2195798_+	Terminase small subunit	NA	A0A0U2RXW9	Escherichia_phage	34.7	1.8e-29
VEI41618.1|2195775_2197080_+	Uncharacterized conserved protein	NA	A0A1B1P9C9	Acinetobacter_phage	60.0	6.8e-148
VEI41619.1|2197084_2198488_+	Uncharacterised protein	NA	G8C7P4	Escherichia_phage	72.5	3.6e-195
VEI41620.1|2198474_2199587_+|head	phage head morphogenesis protein, SPP1 gp7 family	head	I6PD76	Cronobacter_phage	55.6	2.9e-115
VEI41621.1|2199691_2200456_+	Uncharacterised protein	NA	G8C7P6	Escherichia_phage	72.0	2.7e-96
VEI41622.1|2200546_2201683_+|coat	P22 coat protein - gene protein 5	coat	G8C7P7	Escherichia_phage	74.6	1.8e-157
VEI41623.1|2201731_2202013_+	Uncharacterised protein	NA	G8C7P8	Escherichia_phage	41.9	5.9e-09
VEI41624.1|2202016_2202427_+	Uncharacterised protein	NA	A0A0H5AUF0	Pseudomonas_phage	39.7	4.6e-10
VEI41625.1|2202428_2202671_+	Uncharacterised protein	NA	A0A1V0E8A3	Vibrio_phage	58.5	7.6e-13
VEI41626.1|2202645_2203041_+	Uncharacterised protein	NA	A0A0P0I456	Acinetobacter_phage	42.5	2.9e-17
VEI41627.1|2203042_2203675_+	Uncharacterised protein	NA	A0A2H4J0Q3	uncultured_Caudovirales_phage	32.4	4.4e-12
VEI41628.1|2203671_2204064_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41629.1|2204090_2205263_+	Bacterial Ig-like domain (group 2)	NA	A0A059VG08	Pseudomonas_phage	40.9	2.4e-59
>prophage 6
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	2208420	2221815	4867355	tail	Salmonella_phage(66.67%)	13	NA	NA
VEI41638.1|2208420_2211696_+|tail	Phage-related minor tail protein	tail	A0A2H4J9A1	uncultured_Caudovirales_phage	32.5	8.8e-104
VEI41639.1|2211699_2212293_+	Uncharacterised protein	NA	S4TSP7	Salmonella_phage	60.8	4.4e-62
VEI41640.1|2212292_2212877_+	Uncharacterised protein	NA	S4TND4	Salmonella_phage	95.9	3.9e-103
VEI41641.1|2212883_2213282_+	Uncharacterised protein	NA	S4TR39	Salmonella_phage	92.4	1.8e-67
VEI41642.1|2213281_2216002_+	Domain of uncharacterised function (DUF1983)	NA	S4TTF5	Salmonella_phage	88.5	0.0e+00
VEI41643.1|2216001_2216946_+	Uncharacterised protein	NA	H6WRW5	Salmonella_phage	67.1	1.6e-119
VEI41644.1|2216955_2217480_+	Uncharacterised protein	NA	S4TSP4	Salmonella_phage	77.8	4.0e-59
VEI41645.1|2217838_2218381_+	Uncharacterised protein	NA	I6R0Q9	Salmonella_phage	56.3	1.1e-51
VEI41646.1|2218434_2218677_-	damage-inducible protein	NA	Q6UAW0	Klebsiella_phage	76.6	4.4e-29
VEI41647.1|2218754_2219174_+	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	56.7	1.2e-34
VEI41648.1|2219176_2220445_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	79.3	5.7e-200
VEI41649.1|2220504_2221119_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI41650.1|2221143_2221815_-	Uncharacterised ACR, COG2135	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.7	1.2e-79
>prophage 7
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	2931694	3034869	4867355	terminase,protease,lysis,capsid,transposase,plate,portal,integrase,tail	Escherichia_phage(19.67%)	99	2995350:2995377	3029544:3029571
VEI42363.1|2931694_2932060_+|transposase	transposase B	transposase	S5WIU1	Leptospira_phage	42.5	7.7e-25
VEI42364.1|2932489_2934442_-	phosphoglycerol transferase I	NA	NA	NA	NA	NA
VEI42365.1|2935401_2935602_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42366.1|2936053_2936743_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42367.1|2936742_2937639_-	GDP-mannose 4,6-dehydratase	NA	E5EQW4	Bathycoccus_sp._RCC1105_virus	26.6	2.5e-16
VEI42368.1|2937638_2938679_-	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	54.7	1.0e-101
VEI42369.1|2938686_2939760_-	glycosyltransferase, MSMEG_0565 family	NA	NA	NA	NA	NA
VEI42370.1|2940355_2941117_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42371.1|2941113_2942412_-	Mannosylfructose-phosphate synthase	NA	NA	NA	NA	NA
VEI42372.1|2942418_2942691_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42373.1|2942912_2943716_-	Probable S-adenosylmethionine-dependent methyltransferase MSMEG_2350	NA	NA	NA	NA	NA
VEI42374.1|2943705_2944932_-	ferric transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	26.6	9.9e-16
VEI42375.1|2944931_2945726_-	Polysialic acid transport protein kpsM	NA	NA	NA	NA	NA
VEI42376.1|2945726_2947103_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	27.2	4.9e-32
VEI42377.1|2947123_2948539_-	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	32.6	8.9e-61
VEI42378.1|2948920_2949811_-	UTP--glucose-1-phosphate uridylyltransferase subunit GalF	NA	A0A127AW70	Bacillus_phage	39.6	3.9e-46
VEI42379.1|2949976_2951365_-	putative colanic acid biosynthesis protein	NA	A0A291LBB9	Klebsiella_phage	34.7	2.1e-22
VEI42380.1|2951376_2952066_-	colanic acid biosynthesis glycosyl transferase	NA	NA	NA	NA	NA
VEI42381.1|2952065_2952596_-	colanic acid biosynthesis glycosyl transferase	NA	NA	NA	NA	NA
VEI42382.1|2952592_2953873_-	putative pyruvyl transferase	NA	NA	NA	NA	NA
VEI42383.1|2953936_2955415_-	colanic acid exporter	NA	NA	NA	NA	NA
VEI42384.1|2955416_2956055_-	putative UDP-glucose lipid carrier transferase	NA	NA	NA	NA	NA
VEI42385.1|2956102_2956810_-	putative UDP-glucose lipid carrier transferase	NA	NA	NA	NA	NA
VEI42386.1|2957105_2957339_-	mannose-1-phosphate guanylyltransferase	NA	NA	NA	NA	NA
VEI42387.1|2957371_2958547_-	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	24.7	4.4e-21
VEI42388.1|2958550_2959774_-	putative glycosyl transferase	NA	NA	NA	NA	NA
VEI42389.1|2959770_2960250_-	GDP-mannose mannosyl hydrolase)	NA	NA	NA	NA	NA
VEI42390.1|2960249_2961224_-	GDP-L-fucose synthetase	NA	D1LW79	Prochlorococcus_phage	47.5	2.7e-85
VEI42391.1|2961223_2962345_-	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	65.2	3.1e-133
VEI42392.1|2962369_2962924_-	putative colanic acid biosynthesis acetyltransferase WcaF	NA	NA	NA	NA	NA
VEI42393.1|2962933_2963680_-	colanic acid biosynthesis glycosyl transferase	NA	NA	NA	NA	NA
VEI42394.1|2963685_2964903_-	putative colanic acid biosynthesis protein	NA	NA	NA	NA	NA
VEI42395.1|2964877_2966095_-	glycosyl transferase	NA	NA	NA	NA	NA
VEI42396.1|2966132_2966975_-	putative glycosyl transferase	NA	NA	NA	NA	NA
VEI42397.1|2967052_2969215_-	tyrosine kinase	NA	A0A1X9I5D6	Streptococcus_phage	28.4	5.1e-15
VEI42398.1|2969211_2969661_-	tyrosine phosphatase	NA	NA	NA	NA	NA
VEI42399.1|2969666_2970806_-	polysaccharide export protein	NA	NA	NA	NA	NA
VEI42400.1|2971444_2973046_+	transport protein	NA	A0A0R6PEZ3	Moraxella_phage	44.4	7.8e-37
VEI42401.1|2973090_2974944_-	putative assembly protein	NA	NA	NA	NA	NA
VEI42402.1|2974969_2975551_-	deoxycytidine triphosphate deaminase	NA	I4AZP2	Saccharomonospora_phage	43.2	3.2e-33
VEI42403.1|2975642_2976284_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	37.9	8.4e-35
VEI42404.1|2976548_2979929_+	putative sensor protein	NA	NA	NA	NA	NA
VEI42405.1|2979896_2980766_-	3-methyl-adenine DNA glycosylase II	NA	NA	NA	NA	NA
VEI42406.1|2980902_2982255_+	putative chaperone	NA	NA	NA	NA	NA
VEI42407.1|2982692_2983940_+	multidrug resistance protein	NA	NA	NA	NA	NA
VEI42408.1|2983939_2987062_+	multidrug efflux system subunit MdtB	NA	NA	NA	NA	NA
VEI42409.1|2987062_2990143_+	multidrug efflux system subunit MdtC	NA	S5VTK5	Leptospira_phage	22.5	3.8e-64
VEI42410.1|2990139_2991552_+	multidrug efflux system protein MdtE	NA	NA	NA	NA	NA
VEI42411.1|2991551_2992955_+	signal transduction histidine-protein kinase BaeS	NA	W8CYF6	Bacillus_phage	29.2	3.9e-32
VEI42412.1|2992951_2993674_+	DNA-binding transcriptional regulator BaeR	NA	W8CYM9	Bacillus_phage	32.7	9.2e-30
VEI42413.1|2993839_2994037_+|protease	protease	protease	NA	NA	NA	NA
VEI42414.1|2994033_2995200_+|protease	protease	protease	Q6DW11	Phage_TP	93.7	3.7e-206
2995350:2995377	attL	CCCTTACGCAGGCTTATTTTTTGCCTGC	NA	NA	NA	NA
VEI42415.1|2995633_2995816_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42416.1|2995863_2996085_-	prophage late promoter activator protein	NA	A0A2I8TV89	Erwinia_phage	74.0	2.9e-27
VEI42417.1|2996160_2997330_-|tail	phage tail protein	tail	Q6K1G4	Salmonella_virus	75.4	8.1e-161
VEI42418.1|2997326_2997791_-|tail	phage tail protein	tail	A0A218M4I2	Erwinia_phage	72.7	1.2e-59
VEI42419.1|2997804_3000246_-|tail	phage tail tape measure protein	tail	U5N0T4	Enterobacteria_phage	72.0	1.1e-305
VEI42420.1|3000390_3000705_-|tail	phage tail protein	tail	A0A0M4S5P8	Salmonella_phage	64.9	6.4e-28
VEI42421.1|3000758_3001277_-|tail	phage tail tube protein	tail	A0A218M4J0	Erwinia_phage	82.6	1.0e-78
VEI42422.1|3001289_3002483_-|tail	phage tail sheath protein	tail	S4TRX2	Salmonella_phage	82.9	3.0e-187
VEI42423.1|3002610_3003138_-|tail	phage tail fiber assembly protein	tail	U5N0T1	Enterobacteria_phage	55.2	1.8e-46
VEI42424.1|3003153_3004722_-|tail	phage tail fiber protein	tail	Q37842	Escherichia_phage	62.2	2.1e-127
VEI42425.1|3004732_3005263_-|tail	phage tail protein	tail	Q37841	Escherichia_phage	90.9	8.7e-94
VEI42426.1|3005255_3006164_-|plate	phage baseplate assembly protein J	plate	A0A0F7LCJ3	Escherichia_phage	85.4	4.7e-140
VEI42427.1|3006169_3006520_-|plate	phage baseplate assembly protein W	plate	O80315	Escherichia_phage	70.7	2.4e-39
VEI42428.1|3006516_3007158_-|tail	phage tail spike protein	tail	A0A0M4S6F6	Salmonella_phage	78.4	4.1e-90
VEI42429.1|3007457_3010061_-	hemin importer ATP-binding subunit	NA	NA	NA	NA	NA
VEI42430.1|3010230_3010677_-|tail	phage tail completion protein S	tail	O80313	Escherichia_phage	67.3	1.8e-47
VEI42431.1|3010669_3011137_-|tail	phage tail completion protein R	tail	A0A218M4K6	Erwinia_phage	74.2	3.5e-62
VEI42432.1|3011099_3011258_-	Uncharacterised protein	NA	A0A218M4L1	Erwinia_phage	75.0	3.1e-15
VEI42433.1|3011232_3011661_-|lysis	phage lysis regulatory protein, LysB family	lysis	A0A218M4K2	Erwinia_phage	71.1	5.4e-46
VEI42434.1|3011642_3012074_-	Uncharacterised protein	NA	A0A218M4L6	Erwinia_phage	62.2	7.1e-46
VEI42435.1|3012070_3012583_-	Phage-related lysozyme (muraminidase)	NA	A0A218M4K3	Erwinia_phage	88.2	1.1e-82
VEI42436.1|3012566_3012788_-	Uncharacterised protein	NA	A0A218M4L5	Erwinia_phage	79.2	2.2e-27
VEI42437.1|3012778_3012967_-|tail	phage tail protein	tail	S4TTA0	Salmonella_phage	87.1	1.4e-25
VEI42438.1|3012981_3013488_-|capsid	capsid completion protein	capsid	O80306	Escherichia_phage	72.6	1.2e-63
VEI42439.1|3013587_3014343_-|terminase	small terminase subunit	terminase	O80305	Escherichia_phage	73.4	1.1e-81
VEI42440.1|3014346_3015306_-|capsid	major capsid protein	capsid	S4TUA6	Salmonella_phage	83.6	8.2e-151
VEI42441.1|3015302_3015413_-	Uncharacterised protein	NA	S4TUA6	Salmonella_phage	79.3	5.3e-06
VEI42442.1|3015474_3016329_-|capsid	capsid scaffolding protein	capsid	A0A218M4L9	Erwinia_phage	71.5	2.7e-113
VEI42443.1|3016495_3018265_+|terminase	large terminase subunit	terminase	Q9T0R3	Escherichia_phage	84.6	5.1e-300
VEI42444.1|3018266_3019283_+|capsid,portal	capsid portal protein	capsid,portal	Q6K1J0	Salmonella_virus	82.7	3.5e-168
VEI42445.1|3019734_3020694_+|protease	ATP-dependent metalloprotease	protease	R4TQL5	Phaeocystis_globosa_virus	30.9	6.5e-23
VEI42446.1|3020875_3021073_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42447.1|3021399_3023139_+|protease	type VII secretion-associated serine protease mycosin	protease	NA	NA	NA	NA
VEI42448.1|3023174_3023936_-	Uncharacterised protein	NA	I6PD67	Cronobacter_phage	44.3	3.0e-55
VEI42449.1|3023948_3024176_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42450.1|3024391_3026113_-	phage DNA replication protein	NA	S4TTC1	Salmonella_phage	82.2	1.1e-262
VEI42451.1|3026392_3026668_-	Uncharacterised protein	NA	M1TAP2	Escherichia_phage	60.4	1.5e-25
VEI42452.1|3026698_3026908_-	Protein of uncharacterised function (DUF2732)	NA	Q7Y4C2	Escherichia_virus	62.1	9.5e-12
VEI42453.1|3026974_3027475_-	Uncharacterised protein	NA	M1SV55	Escherichia_phage	74.7	2.8e-70
VEI42454.1|3027656_3027932_-	regulatory protein cox	NA	Q1JS60	Enterobacteria_phage	80.2	2.8e-40
VEI42455.1|3028051_3028351_+	phage repressor protein	NA	Q1JS61	Enterobacteria_phage	88.9	3.9e-43
VEI42456.1|3028446_3028911_+|integrase	phage integrase	integrase	Q83VS6	Escherichia_phage	83.2	1.2e-67
VEI42457.1|3029141_3029459_+|integrase	phage integrase	integrase	Q83VS6	Escherichia_phage	79.0	1.9e-43
VEI42458.1|3029663_3031940_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	42.1	2.4e-164
3029544:3029571	attR	CCCTTACGCAGGCTTATTTTTTGCCTGC	NA	NA	NA	NA
VEI42459.1|3031970_3032291_-|protease	ATP-dependent Clp protease adaptor protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	3.5e-13
VEI42460.1|3032613_3032838_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	2.8e-17
VEI42461.1|3032922_3034869_-	macrolide transporter ATP-binding /permease protein	NA	G9BWD6	Planktothrix_phage	42.2	2.8e-41
>prophage 8
LR134485	Citrobacter youngae strain NCTC13709 genome assembly, chromosome: 1	4867355	3555541	3623652	4867355	terminase,protease,capsid,plate,integrase,portal,tRNA,tail	Enterobacteria_phage(50.0%)	80	3583271:3583288	3627434:3627451
VEI42934.1|3555541_3556927_-|tRNA	cysteinyl-tRNA synthetase	tRNA	M1PG92	Moumouvirus	35.4	3.5e-46
VEI42935.1|3557100_3557595_+	peptidyl-prolyl cis-trans isomerase B (rotamase B)	NA	NA	NA	NA	NA
VEI42936.1|3557597_3558320_+	UDP-2,3-diacylglucosamine hydrolase	NA	NA	NA	NA	NA
VEI42937.1|3558437_3558947_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	NA	NA	NA	NA
VEI42938.1|3558943_3560011_+	phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
VEI42939.1|3560107_3561193_+|tRNA	tRNA 2-selenouridine synthase	tRNA	NA	NA	NA	NA
VEI42940.1|3561193_3561853_-	ABC transporter	NA	NA	NA	NA	NA
VEI42941.1|3561845_3562862_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	1.5e-33
VEI42942.1|3562925_3563756_-	DL-methionine transporter substrate-binding subunit	NA	NA	NA	NA	NA
VEI42943.1|3564018_3565191_-	Outer membrane protein (porin)	NA	NA	NA	NA	NA
VEI42944.1|3565339_3567754_-	permease	NA	NA	NA	NA	NA
VEI42945.1|3567750_3568437_-	putative ABC transporter ATP-binding protein YbbA	NA	G9BWD6	Planktothrix_phage	33.8	1.8e-30
VEI42946.1|3568530_3569031_+|protease	multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1	protease	NA	NA	NA	NA
VEI42947.1|3569059_3569830_+	short chain dehydrogenase	NA	NA	NA	NA	NA
VEI42948.1|3569888_3570743_+	thioredoxin-like protein	NA	NA	NA	NA	NA
VEI42949.1|3570788_3571568_-	ABC-type uncharacterized transport system, permease component	NA	NA	NA	NA	NA
VEI42950.1|3571554_3572232_-	putative ABC transporter ATP-binding protein YbbL	NA	G3M9Y6	Bacillus_virus	35.2	3.1e-27
VEI42951.1|3572561_3573479_+|protease	FtsH protease regulator HflK	protease	NA	NA	NA	NA
VEI42952.1|3573475_3573934_+	Inner membrane protein ybbJ	NA	NA	NA	NA	NA
VEI42953.1|3573953_3576098_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42954.1|3576067_3576784_+	Protein of uncharacterised function (DUF3142)	NA	NA	NA	NA	NA
VEI42955.1|3576780_3577227_-	DNA-binding transcriptional regulator CueR	NA	NA	NA	NA	NA
VEI42956.1|3577481_3579626_+	bifunctional enterobactin receptor/adhesin protein	NA	NA	NA	NA	NA
VEI42957.1|3579628_3580453_+	vitamin B12-transporter protein BtuF	NA	NA	NA	NA	NA
VEI42958.1|3580471_3581809_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
VEI42959.1|3581821_3582316_+	Putative heme iron utilization protein	NA	NA	NA	NA	NA
VEI42960.1|3582315_3582939_+	Putative NADH-flavin reductase	NA	NA	NA	NA	NA
VEI42961.1|3582990_3583983_+	vitamin B12 ABC transporter permease	NA	NA	NA	NA	NA
3583271:3583288	attL	CGCTGATGGTCGGTATCG	NA	NA	NA	NA
VEI42962.1|3583979_3584750_+	hemin importer ATP-binding subunit	NA	W5SAS9	Pithovirus	28.8	5.2e-15
VEI42963.1|3584904_3585927_-|integrase	phage integrase	integrase	Q83VS6	Escherichia_phage	52.0	2.4e-92
VEI42964.1|3585996_3586296_-	phage repressor protein	NA	Q1JS29	Enterobacteria_phage	55.6	1.1e-24
VEI42965.1|3586418_3586880_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42966.1|3586893_3587151_+	Uncharacterised protein	NA	A0A0M5M1I3	Salmonella_phage	50.0	2.4e-09
VEI42967.1|3587163_3587343_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42968.1|3587355_3587583_+	Uncharacterised protein	NA	A0A0M4S6M9	Salmonella_phage	68.0	4.8e-25
VEI42969.1|3587598_3587871_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42970.1|3587940_3588165_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42971.1|3588161_3588710_+	prophage exonuclease	NA	D4HTX2	Vibrio_phage	28.2	2.1e-10
VEI42972.1|3588718_3589672_+	DNA adenine methylase	NA	A0A0M4QWR0	Salmonella_phage	55.7	5.6e-83
VEI42973.1|3589671_3589944_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42974.1|3589940_3590114_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42975.1|3590123_3591140_+	Modification methylase HhaI	NA	Q6J1P4	Burkholderia_virus	54.1	2.2e-98
VEI42976.1|3591132_3592986_+	phage DNA replication protein	NA	A0A0M4RTM8	Salmonella_phage	54.7	6.9e-162
VEI42977.1|3592949_3593771_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42978.1|3593773_3594295_+	Uncharacterised protein	NA	A0A2C9CX56	Yersinia_phage	76.2	2.5e-29
VEI42979.1|3594397_3595093_+	Site-specific DNA methylase	NA	A0A0M4S5U3	Salmonella_phage	72.7	4.8e-92
VEI42980.1|3595181_3595589_-	Phage/plasmid maintenance protein	NA	NA	NA	NA	NA
VEI42981.1|3595588_3595744_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42982.1|3595740_3595944_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42983.1|3596459_3597503_-|capsid,portal	capsid portal protein	capsid,portal	A0A0A7NPT9	Enterobacteria_phage	78.1	8.6e-162
VEI42984.1|3597502_3599236_-|terminase	large terminase subunit	terminase	A0A0A7NV54	Enterobacteria_phage	76.2	1.1e-265
VEI42985.1|3599393_3600230_+|capsid	capsid scaffolding protein	capsid	A0A0A7NRY7	Enterobacteria_phage	64.7	1.3e-96
VEI42986.1|3600252_3601326_+|capsid	major capsid protein	capsid	A0A0A7NQ82	Enterobacteria_phage	70.3	9.5e-140
VEI42987.1|3601377_3602196_+|terminase	small terminase subunit	terminase	A0A0A7NPX9	Enterobacteria_phage	63.5	1.6e-86
VEI42988.1|3602302_3602830_+|capsid	capsid completion protein	capsid	A0A0A7NPU2	Enterobacteria_phage	61.7	9.6e-53
VEI42989.1|3602829_3603030_+|tail	phage tail protein	tail	A0A0A7NV57	Enterobacteria_phage	71.2	1.1e-20
VEI42990.1|3603020_3603323_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI42991.1|3603291_3603852_+	Phage-related lysozyme (muraminidase)	NA	A0A1S5Q8G1	Aeromonas_phage	40.8	3.5e-29
VEI42992.1|3603848_3604286_+	prophage lipoprotein	NA	A0A0A7NPY2	Enterobacteria_phage	31.9	1.2e-05
VEI42993.1|3604496_3604961_+|tail	phage tail completion protein R	tail	A0A0A7NPU6	Enterobacteria_phage	68.7	1.9e-60
VEI42994.1|3604957_3605596_+|tail	phage tail completion protein S	tail	A0A0A7NV60	Enterobacteria_phage	57.1	2.7e-65
VEI42995.1|3605592_3606174_+|tail	phage tail spike protein	tail	A0A0A7NRZ3	Enterobacteria_phage	74.1	7.6e-75
VEI42996.1|3606170_3606539_+|plate	phage baseplate assembly protein W	plate	A0A0A7NQ90	Enterobacteria_phage	69.0	2.1e-38
VEI42997.1|3606525_3607422_+|plate	phage baseplate assembly protein J	plate	A0A0A7NPY5	Enterobacteria_phage	67.1	1.2e-100
VEI42998.1|3607414_3608032_+|tail	phage tail protein	tail	A0A1J0I2I4	Salmonella_phage	62.8	4.7e-67
VEI42999.1|3608021_3609545_+|tail	phage tail fiber protein	tail	A0A0M3ULH6	Salmonella_phage	85.5	9.7e-122
VEI43000.1|3609549_3609999_+|tail	phage tail fiber assembly protein	tail	U5P0S4	Shigella_phage	54.9	4.9e-13
VEI43001.1|3609995_3610199_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI43002.1|3610677_3611235_+	phage DNA invertase	NA	A0A1S6L009	Salmonella_phage	85.2	4.2e-83
VEI43003.1|3611276_3611765_-|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	79.5	7.3e-71
VEI43004.1|3611781_3614760_-|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	53.2	7.9e-269
VEI43005.1|3614907_3615243_-|tail	phage tail protein	tail	A0A0A7NPZ0	Enterobacteria_phage	57.5	3.6e-21
VEI43006.1|3615292_3615679_-|tail	phage tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	64.1	4.3e-42
VEI43007.1|3615675_3615804_-|tail	phage tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	62.5	8.6e-08
VEI43008.1|3615804_3616992_-|tail	phage tail sheath protein	tail	A0A0A7NV69	Enterobacteria_phage	82.5	1.8e-187
VEI43009.1|3617144_3618275_+|tail	phage tail protein	tail	A0A0A7NQ97	Enterobacteria_phage	77.9	1.6e-158
VEI43010.1|3618320_3618572_+	prophage late promoter activator protein	NA	NA	NA	NA	NA
VEI43011.1|3618608_3619310_-	Uncharacterised protein	NA	A0A218M4H5	Erwinia_phage	42.9	6.4e-36
VEI43012.1|3619565_3622067_+	copper exporting ATPase	NA	A0A218MNH6	uncultured_virus	38.4	3.4e-116
VEI43013.1|3623163_3623652_+|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK	tRNA	NA	NA	NA	NA
3627434:3627451	attR	CGCTGATGGTCGGTATCG	NA	NA	NA	NA
