assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637965.1_53990_D02	LR134478	Serratia plymuthica strain NCTC8015 genome assembly, chromosome: 1	1	468708-471632	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Type I-E	GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	44,47,47,44	47	TypeI-E	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA,NA|53aa|down_1|LR134478.1_475046_475205_+,NA|48aa|down_9|LR134478.1_483426_483570_+	NA|295aa|up_9|LR134478.1_456926_457811_+	PRK11189, PRK11189, lipoprotein NlpI; Provisional	NA|656aa|up_8|LR134478.1_457998_459966_+	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|405aa|up_7|LR134478.1_460113_461328_+	PRK11099, PRK11099, putative inner membrane protein; Provisional	NA|80aa|up_6|LR134478.1_461324_461564_+	PRK11018, PRK11018, putative sulfurtransferase YedF	NA|289aa|up_5|LR134478.1_461572_462439_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|481aa|up_4|LR134478.1_462560_464003_+	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|338aa|up_3|LR134478.1_464046_465060_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|324aa|up_2|LR134478.1_465284_466256_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|385aa|up_1|LR134478.1_466237_467392_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|380aa|up_0|LR134478.1_467388_468528_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	cas3|895aa|down_0|LR134478.1_471994_474679_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|53aa|down_1|LR134478.1_475046_475205_+	NA	cas8e|525aa|down_2|LR134478.1_475261_476836_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|196aa|down_3|LR134478.1_476828_477416_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|354aa|down_4|LR134478.1_477437_478499_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|243aa|down_5|LR134478.1_478508_479237_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|222aa|down_6|LR134478.1_479236_479902_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|down_7|LR134478.1_479905_480826_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|down_8|LR134478.1_480825_481119_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|48aa|down_9|LR134478.1_483426_483570_+	NA
GCA_900637965.1_53990_D02	LR134478	Serratia plymuthica strain NCTC8015 genome assembly, chromosome: 1	2	481204-483369	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	32,35,35	35	TypeI-E	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA|53aa|up_7|LR134478.1_475046_475205_+,NA|48aa|down_0|LR134478.1_483426_483570_+,NA|107aa|down_3|LR134478.1_485920_486241_+,NA|75aa|down_4|LR134478.1_486282_486507_+	NA|380aa|up_9|LR134478.1_467388_468528_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	cas3|895aa|up_8|LR134478.1_471994_474679_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|53aa|up_7|LR134478.1_475046_475205_+	NA	cas8e|525aa|up_6|LR134478.1_475261_476836_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|196aa|up_5|LR134478.1_476828_477416_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|354aa|up_4|LR134478.1_477437_478499_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|243aa|up_3|LR134478.1_478508_479237_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|222aa|up_2|LR134478.1_479236_479902_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|up_1|LR134478.1_479905_480826_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LR134478.1_480825_481119_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|48aa|down_0|LR134478.1_483426_483570_+	NA	NA|212aa|down_1|LR134478.1_483585_484221_-	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional	NA|419aa|down_2|LR134478.1_484251_485508_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|107aa|down_3|LR134478.1_485920_486241_+	NA	NA|75aa|down_4|LR134478.1_486282_486507_+	NA	NA|293aa|down_5|LR134478.1_486564_487443_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|down_6|LR134478.1_487454_488450_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|174aa|down_7|LR134478.1_488677_489199_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|down_8|LR134478.1_489192_489696_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|102aa|down_9|LR134478.1_489682_489988_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated
GCA_900637965.1_53990_D02	LR134478	Serratia plymuthica strain NCTC8015 genome assembly, chromosome: 1	3	1457117-1457223	3	CRISPRCasFinder	no	WYL	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Unclear	CGAAATCCATAGGGTTAGTTTTTCTTAA	28	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA|192aa|up_5|LR134478.1_1448658_1449234_+,NA|127aa|up_4|LR134478.1_1449282_1449663_+,NA|256aa|down_8|LR134478.1_1465939_1466707_+	NA|311aa|up_9|LR134478.1_1444966_1445899_+	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein	NA|288aa|up_8|LR134478.1_1445957_1446821_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|300aa|up_7|LR134478.1_1446817_1447717_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|155aa|up_6|LR134478.1_1447833_1448298_+	COG4807, COG4807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|192aa|up_5|LR134478.1_1448658_1449234_+	NA	NA|127aa|up_4|LR134478.1_1449282_1449663_+	NA	NA|105aa|up_3|LR134478.1_1449784_1450099_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|623aa|up_2|LR134478.1_1450380_1452249_+	PRK08186, PRK08186, allophanate hydrolase; Provisional	NA|1208aa|up_1|LR134478.1_1452619_1456243_+	TIGR02712, Includes:_Allophanate_hydrolase, urea carboxylase	NA|230aa|up_0|LR134478.1_1456315_1457005_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|423aa|down_0|LR134478.1_1457262_1458531_+	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|527aa|down_1|LR134478.1_1458618_1460199_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|359aa|down_2|LR134478.1_1460198_1461275_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|269aa|down_3|LR134478.1_1461271_1462078_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|down_4|LR134478.1_1462087_1462786_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|171aa|down_5|LR134478.1_1462889_1463402_+	pfam09933, DUF2165, Predicted small integral membrane protein (DUF2165)	NA|571aa|down_6|LR134478.1_1463572_1465285_+	TIGR03397, acid_phos_Burk, acid phosphatase, Burkholderia-type	NA|171aa|down_7|LR134478.1_1465307_1465820_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|256aa|down_8|LR134478.1_1465939_1466707_+	NA	NA|183aa|down_9|LR134478.1_1466699_1467248_+	smart00953, RES, RES domain
