assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637955.1_54424_G02	LR134476	Trueperella bialowiezensis strain NCTC13354 genome assembly, chromosome: 1	1	308691-308764	1	CRISPRCasFinder	no	DinG	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type IV-A	TTATTGCTGTAATAGCAGAAACG	23	0	0	NA	NA	NA	1	1	Orphan	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|130aa|up_2|LR134476.1_306490_306880_-,NA	NA|371aa|up_9|LR134476.1_296734_297847_-	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	NA|410aa|up_8|LR134476.1_297846_299076_-	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|514aa|up_7|LR134476.1_299072_300614_-	PRK01438, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	NA|362aa|up_6|LR134476.1_300610_301696_-	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|466aa|up_5|LR134476.1_301696_303094_-	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]	NA|511aa|up_4|LR134476.1_303090_304623_-	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|627aa|up_3|LR134476.1_304600_306481_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|130aa|up_2|LR134476.1_306490_306880_-	NA	NA|334aa|up_1|LR134476.1_306876_307878_-	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|144aa|up_0|LR134476.1_308014_308446_-	PRK00326, PRK00326, transcriptional regulator MraZ	NA|125aa|down_0|LR134476.1_308852_309227_-	pfam11239, DUF3040, Protein of unknown function (DUF3040)	NA|412aa|down_1|LR134476.1_309315_310551_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|298aa|down_2|LR134476.1_310623_311517_+	PRK04457, PRK04457, polyamine aminopropyltransferase	NA|469aa|down_3|LR134476.1_311517_312924_-	cd06174, MFS, Major Facilitator Superfamily	NA|342aa|down_4|LR134476.1_312923_313949_-	pfam09754, PAC2, PAC2 family	NA|745aa|down_5|LR134476.1_314121_316356_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|404aa|down_6|LR134476.1_316367_317579_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|625aa|down_7|LR134476.1_317655_319530_+	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	NA|157aa|down_8|LR134476.1_319626_320097_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|236aa|down_9|LR134476.1_320313_321021_-	PRK14125, PRK14125, cell division suppressor protein YneA; Provisional
GCA_900637955.1_54424_G02	LR134476	Trueperella bialowiezensis strain NCTC13354 genome assembly, chromosome: 1	2	521993-522067	2	CRISPRCasFinder	no	DEDDh	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	CCATTATTGCTAAATAAGCAGAAA	24	0	0	NA	NA	NA	1	1	Orphan	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|483aa|up_8|LR134476.1_507929_509378_-,NA	NA|846aa|up_9|LR134476.1_505262_507800_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|483aa|up_8|LR134476.1_507929_509378_-	NA	NA|522aa|up_7|LR134476.1_509446_511012_-	PRK00074, guaA, GMP synthase; Reviewed	NA|318aa|up_6|LR134476.1_511085_512039_-	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|544aa|up_5|LR134476.1_512193_513825_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|391aa|up_4|LR134476.1_513905_515078_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|1534aa|up_3|LR134476.1_515292_519894_-	COG3580, COG3580, Uncharacterized protein conserved in bacteria [Function unknown]	NA|206aa|up_2|LR134476.1_520088_520706_+	pfam17920, TetR_C_16, Tetracyclin repressor-like, C-terminal domain	NA|144aa|up_1|LR134476.1_520741_521173_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|229aa|up_0|LR134476.1_521174_521861_-	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)	NA|462aa|down_0|LR134476.1_522187_523573_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|370aa|down_1|LR134476.1_523684_524794_-	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein	DEDDh|231aa|down_2|LR134476.1_524952_525645_+	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional	NA|331aa|down_3|LR134476.1_525641_526634_+	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|483aa|down_4|LR134476.1_526620_528069_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|down_5|LR134476.1_528052_529123_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|267aa|down_6|LR134476.1_529150_529951_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|231aa|down_7|LR134476.1_529943_530636_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|472aa|down_8|LR134476.1_530811_532227_+	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|502aa|down_9|LR134476.1_532307_533813_-	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain
GCA_900637955.1_54424_G02	LR134476	Trueperella bialowiezensis strain NCTC13354 genome assembly, chromosome: 1	3	936426-936502	3	CRISPRCasFinder	no	cas3	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GCAGAACTGCTATATAAGCAGAAACG	26	0	0	NA	NA	NA	1	1	Unclear	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|44aa|up_3|LR134476.1_931879_932011_-,NA|122aa|down_0|LR134476.1_936815_937181_+	NA|333aa|up_9|LR134476.1_926591_927590_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|375aa|up_8|LR134476.1_927738_928863_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|305aa|up_7|LR134476.1_928904_929819_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|209aa|up_6|LR134476.1_929815_930442_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|226aa|up_5|LR134476.1_930665_931343_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|155aa|up_4|LR134476.1_931418_931883_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|44aa|up_3|LR134476.1_931879_932011_-	NA	NA|114aa|up_2|LR134476.1_932101_932443_-	pfam02467, Whib, Transcription factor WhiB	NA|813aa|up_1|LR134476.1_932665_935104_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|348aa|up_0|LR134476.1_935105_936149_+	COG1408, COG1408, Predicted phosphohydrolases [General function prediction only]	NA|122aa|down_0|LR134476.1_936815_937181_+	NA	NA|142aa|down_1|LR134476.1_937118_937544_-	PRK11770, PRK11770, YccF domain-containing protein	NA|196aa|down_2|LR134476.1_937656_938244_-	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide	NA|346aa|down_3|LR134476.1_938378_939416_+	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|142aa|down_4|LR134476.1_939412_939838_-	cd00756, MoaE, MoaE family	NA|166aa|down_5|LR134476.1_939905_940403_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|458aa|down_6|LR134476.1_940386_941760_+	cd00887, MoeA, MoeA family	NA|164aa|down_7|LR134476.1_941788_942280_-	cd00886, MogA_MoaB, MogA_MoaB family	NA|259aa|down_8|LR134476.1_942482_943259_+	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold	NA|756aa|down_9|LR134476.1_943282_945550_+	cd03259, ABC_Carb_Solutes_like, ATP-binding cassette domain of the carbohydrate and solute transporters-like
GCA_900637955.1_54424_G02	LR134476	Trueperella bialowiezensis strain NCTC13354 genome assembly, chromosome: 1	4	1271489-1273715	4,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GGGCTCATCCCCGCCAGCGCGGGGAGCAC,GGGCTCATCCCCGCCAGCGCGGGGAGCAC,AGGCTCATCCCCGCCAGCGCGGGGAGCAC,GGGCTCATCCCCGCCAGCGCGGGGAGCAC	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	36,36,14,14	36	TypeI-E	cas4,WYL,DEDDh,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|68aa|up_9|LR134476.1_1261812_1262016_-,NA|275aa|up_8|LR134476.1_1262135_1262960_-,NA|483aa|up_6|LR134476.1_1264339_1265788_-,NA|86aa|down_8|LR134476.1_1283275_1283533_+	NA|68aa|up_9|LR134476.1_1261812_1262016_-	NA	NA|275aa|up_8|LR134476.1_1262135_1262960_-	NA	NA|430aa|up_7|LR134476.1_1262971_1264261_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|483aa|up_6|LR134476.1_1264339_1265788_-	NA	NA|323aa|up_5|LR134476.1_1265858_1266827_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|205aa|up_4|LR134476.1_1266957_1267572_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|459aa|up_3|LR134476.1_1267579_1268956_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|275aa|up_2|LR134476.1_1268978_1269803_-	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|136aa|up_1|LR134476.1_1269807_1270215_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|375aa|up_0|LR134476.1_1270215_1271340_+	PRK03321, PRK03321, putative aminotransferase; Provisional	cas2|116aa|down_0|LR134476.1_1273873_1274221_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|313aa|down_1|LR134476.1_1274217_1275156_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|LR134476.1_1275158_1275827_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|235aa|down_3|LR134476.1_1275826_1276531_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|378aa|down_4|LR134476.1_1276534_1277668_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|231aa|down_5|LR134476.1_1277681_1278374_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|578aa|down_6|LR134476.1_1278373_1280107_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|937aa|down_7|LR134476.1_1280285_1283096_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|86aa|down_8|LR134476.1_1283275_1283533_+	NA	NA|218aa|down_9|LR134476.1_1283410_1284064_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system
