The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134397	Listeria monocytogenes strain NCTC7973 genome assembly, chromosome: 1	2908293	117145	123670	2908293		Listeria_phage(33.33%)	10	NA	NA
VEH57345.1|117145_117607_-	Domain of uncharacterised function (DUF955)	NA	A0A059T7S0	Listeria_phage	47.9	3.1e-31
VEH57346.1|117603_117939_-	Predicted transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
VEH57347.1|118155_118584_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH57348.1|118595_119012_+	phage transcriptional regulator, ArpU family	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
VEH57349.1|119289_119679_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH57350.1|119691_120204_+	Predicted secreted protein	NA	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
VEH57351.1|120251_120554_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH57352.1|120595_121000_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH57353.1|120986_122855_+	Phage-related protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
VEH57354.1|122851_123670_+	Phage-related protein	NA	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
LR134397	Listeria monocytogenes strain NCTC7973 genome assembly, chromosome: 1	2908293	1225543	1295208	2908293	portal,protease,tail,capsid,terminase	Listeria_phage(89.71%)	94	NA	NA
VEH58849.1|1225543_1226677_-	Tyrosine recombinase XerD	NA	A8ATC7	Listeria_phage	50.3	1.3e-94
VEH58850.1|1226803_1227418_-	Uncharacterised protein	NA	A0A059T7Z1	Listeria_phage	86.3	1.4e-87
VEH58851.1|1227829_1228303_-	Helix-turn-helix domain	NA	R4IDX0	Listeria_phage	45.3	3.1e-18
VEH58852.1|1228568_1228760_+	Helix-turn-helix domain	NA	A0A059T5F8	Listeria_phage	92.1	6.4e-23
VEH58853.1|1228795_1229038_+	Uncharacterised protein	NA	A8ATD2	Listeria_phage	65.0	1.1e-24
VEH58854.1|1229041_1229236_+	Uncharacterised protein	NA	A0A059T7Z3	Listeria_phage	73.4	7.4e-19
VEH58855.1|1229470_1229623_+	Uncharacterised protein	NA	A8ATD4	Listeria_phage	100.0	1.5e-19
VEH58856.1|1229756_1229933_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58857.1|1229929_1230205_+	Uncharacterised protein	NA	A0A059T7V3	Listeria_phage	86.3	4.3e-36
VEH58858.1|1230201_1230648_+	Uncharacterised protein	NA	A0A059T5F9	Listeria_phage	93.9	2.9e-74
VEH58859.1|1230658_1230862_+	Uncharacterised protein	NA	A8ASN5	Listeria_phage	92.6	2.7e-19
VEH58860.1|1230919_1231483_+	Protein of uncharacterised function (DUF1642)	NA	Q8W5X2	Listeria_phage	46.3	1.8e-36
VEH58861.1|1231479_1231626_+	Uncharacterised protein	NA	A8ATZ0	Listeria_phage	97.9	2.3e-20
VEH58862.1|1231641_1231821_+	Uncharacterised protein	NA	A0A059T5G0	Listeria_phage	86.4	1.3e-22
VEH58863.1|1231817_1232111_+	Uncharacterised protein	NA	A8ATM4	Listeria_phage	76.3	3.4e-31
VEH58864.1|1232128_1232650_+	YopX protein	NA	A8ASP1	Listeria_phage	54.1	3.1e-35
VEH58865.1|1232649_1232919_+	Uncharacterised protein	NA	A0A059T7S7	Listeria_phage	92.9	7.3e-41
VEH58866.1|1232915_1233539_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEH58867.1|1233535_1233742_+	Uncharacterised protein	NA	A0A059T6C7	Listeria_phage	94.1	3.4e-30
VEH58868.1|1233738_1233990_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58869.1|1234093_1234477_+	Uncharacterised protein	NA	A8ATZ3	Listeria_phage	93.7	2.5e-58
VEH58870.1|1234497_1234725_+	Domain of Uncharacterised Function with PDB structure	NA	A0A059T7N3	Listeria_phage	84.0	4.6e-28
VEH58871.1|1234736_1235045_+	Uncharacterised protein	NA	A0A059T801	Listeria_phage	95.1	8.4e-49
VEH58872.1|1235107_1235611_+	Uncharacterised protein	NA	A0A059T8B2	Listeria_phage	27.3	9.3e-05
VEH58873.1|1235594_1236188_+	Uncharacterised protein	NA	A8ATS5	Listeria_phage	65.2	5.9e-59
VEH58874.1|1236187_1236760_+	Protein of unknwon function (DUF3310)	NA	A0A059T5J6	Listeria_phage	73.7	2.0e-75
VEH58875.1|1236756_1236930_+	Uncharacterised protein	NA	A0A059T5G3	Listeria_phage	96.5	4.4e-23
VEH58876.1|1236926_1237310_+	Uncharacterised protein	NA	A8ATE8	Listeria_phage	80.3	1.0e-51
VEH58877.1|1237311_1237791_+	Siphovirus Gp157	NA	Q8W5W1	Listeria_phage	100.0	5.4e-79
VEH58878.1|1237803_1238493_+	phage nucleotide-binding protein	NA	A0A059T7T3	Listeria_phage	100.0	2.6e-130
VEH58879.1|1238556_1239813_+	ATP-dependent RNA helicase SrmB	NA	Q8W5V9	Listeria_phage	97.6	4.9e-236
VEH58880.1|1239837_1240323_+	Protein of uncharacterised function (DUF669)	NA	Q8W5V8	Listeria_phage	99.4	1.4e-87
VEH58881.1|1240345_1242688_+	Uncharacterized conserved protein	NA	A0A059T6A4	Listeria_phage	43.2	1.3e-146
VEH58882.1|1242982_1243303_+	VRR-NUC domain	NA	Q8W5V6	Listeria_phage	97.1	9.9e-53
VEH58883.1|1243324_1243855_+	Protein of unknwon function (DUF3310)	NA	A0A059T7T5	Listeria_phage	88.1	2.1e-87
VEH58884.1|1243855_1244281_+	phage transcriptional regulator, RinA family	NA	Q8W5V4	Listeria_phage	92.9	1.0e-68
VEH58885.1|1245228_1245528_+	Uncharacterised protein	NA	A0A059T7Y1	Listeria_phage	98.0	1.7e-46
VEH58886.1|1245524_1247168_+|terminase	Phage terminase-like protein, large subunit	terminase	A0A059T7Q8	Listeria_phage	98.4	0.0e+00
VEH58887.1|1247177_1247567_-	Uncharacterised protein	NA	A0A1Q1PVT8	Staphylococcus_phage	39.8	4.8e-17
VEH58888.1|1247617_1248748_+|portal	phage portal protein, HK97 family	portal	A0A059T6F0	Listeria_phage	95.2	1.7e-208
VEH58889.1|1248744_1249542_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A059T5F2	Listeria_phage	98.5	1.2e-142
VEH58890.1|1249568_1250720_+|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A059T678	Listeria_phage	100.0	6.3e-214
VEH58891.1|1250726_1250897_+	Uncharacterised protein	NA	A0A059T7Y2	Listeria_phage	100.0	6.3e-22
VEH58892.1|1250906_1251206_+	Uncharacterised protein	NA	A0A059T7R0	Listeria_phage	100.0	5.3e-48
VEH58893.1|1251189_1251555_+	Uncharacterised protein	NA	A0A059T6F2	Listeria_phage	98.3	9.3e-63
VEH58894.1|1251551_1251953_+	Uncharacterised protein	NA	A8ATA2	Listeria_phage	94.7	1.1e-64
VEH58895.1|1251949_1252333_+	Uncharacterised protein	NA	A0A059T681	Listeria_phage	96.1	1.0e-64
VEH58896.1|1252353_1252941_+|tail	phage major tail protein, phi13 family	tail	A0A059T7Y4	Listeria_phage	99.0	9.9e-107
VEH58897.1|1253011_1253344_+	Uncharacterised protein	NA	A0A059T7R2	Listeria_phage	97.3	5.1e-52
VEH58898.1|1253394_1253544_+	Uncharacterised protein	NA	A0A059T6F4	Listeria_phage	100.0	2.3e-20
VEH58899.1|1253559_1258479_+	Phage-related protein	NA	A0A059T5F4	Listeria_phage	94.8	0.0e+00
VEH58900.1|1258475_1260125_+	Phage-related protein	NA	A0A059T682	Listeria_phage	98.9	0.0e+00
VEH58901.1|1260140_1262435_+	Phage-related protein	NA	A0A059T7Y6	Listeria_phage	98.7	0.0e+00
VEH58902.1|1262424_1263519_+	Uncharacterised protein	NA	A0A059T7R4	Listeria_phage	94.5	5.6e-196
VEH58903.1|1263567_1264011_+	Uncharacterised protein	NA	A0A059T6F6	Listeria_phage	100.0	6.8e-76
VEH58904.1|1263989_1264406_+	Uncharacterised protein	NA	A0A059T5F5	Listeria_phage	99.3	9.3e-43
VEH58905.1|1264426_1264690_+	Small integral membrane protein	NA	A0A059T684	Listeria_phage	93.0	9.7e-38
VEH58906.1|1264686_1264920_+	Uncharacterised protein	NA	R4IBI3	Listeria_phage	84.4	4.6e-31
VEH58907.1|1264921_1265695_+	N-acetylmuramoyl-L-alanine amidase CwlA precursor	NA	R4ICC5	Listeria_phage	88.4	1.3e-85
VEH58908.1|1265795_1265990_+	Ftsk gamma domain	NA	NA	NA	NA	NA
VEH58909.1|1266151_1266724_-	Uncharacterised protein	NA	A0A059T7R6	Listeria_phage	93.7	9.0e-97
VEH58910.1|1266791_1267241_-	Uncharacterised protein	NA	Q9T196	Listeria_phage	91.3	2.1e-69
VEH58912.1|1267245_1267596_-	Uncharacterised protein	NA	Q9T195	Listeria_phage	93.1	4.9e-53
VEH58914.1|1267627_1268005_-	Uncharacterised protein	NA	A0A059T686	Listeria_phage	97.6	9.3e-66
VEH58916.1|1268507_1268741_+	Uncharacterised protein	NA	A8ATX0	Listeria_phage	94.8	2.3e-35
VEH58918.1|1268737_1268920_+	Uncharacterised protein	NA	A8ATC6	Listeria_phage	60.7	6.3e-12
VEH58920.1|1269456_1270710_+	Protein of uncharacterised function (DUF1254)	NA	NA	NA	NA	NA
VEH58922.1|1270751_1271345_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEH58924.1|1271498_1271906_-	3-demethylubiquinone-9 3-methyltransferase	NA	NA	NA	NA	NA
VEH58926.1|1272070_1272670_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	A0A1X9IGJ2	Lactococcus_phage	40.5	1.7e-29
VEH58928.1|1272701_1272962_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58930.1|1273085_1274498_+	ATP-dependent RNA helicase dbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.8	8.3e-51
VEH58932.1|1274522_1274786_+	Protein of uncharacterised function (DUF3116)	NA	NA	NA	NA	NA
VEH58934.1|1274954_1275431_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
VEH58936.1|1275469_1275715_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58938.1|1275711_1276917_-	Sulfonamide resistance protein	NA	NA	NA	NA	NA
VEH58940.1|1277121_1277781_+	Listeriolysin regulatory protein	NA	NA	NA	NA	NA
VEH58942.1|1278083_1278932_-	Uncharacterized BCR, YitT family COG1284	NA	NA	NA	NA	NA
VEH58944.1|1279551_1280265_+	Trehalose operon transcriptional repressor	NA	NA	NA	NA	NA
VEH58946.1|1280295_1281942_-	Trehalose-6-phosphate hydrolase	NA	NA	NA	NA	NA
VEH58948.1|1281960_1283445_-	EIIBC-Tre	NA	NA	NA	NA	NA
VEH58950.1|1283560_1284013_+	NUDIX domain	NA	NA	NA	NA	NA
VEH58952.1|1284059_1284524_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58954.1|1284712_1285633_+	Phospholipase ytpA	NA	NA	NA	NA	NA
VEH58956.1|1285652_1286900_-	Gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	51.8	1.2e-106
VEH58958.1|1286883_1287714_-	Glutamate 5-kinase 1	NA	A0A1X9I5D0	Streptococcus_phage	42.4	4.3e-47
VEH58960.1|1287849_1288989_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58962.1|1289069_1289465_-	HTH-type transcriptional regulator immR	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
VEH58964.1|1289615_1289831_+	Helix-turn-helix	NA	NA	NA	NA	NA
VEH58966.1|1289949_1290483_+	Matrixin	NA	NA	NA	NA	NA
VEH58968.1|1290500_1291166_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58970.1|1291427_1292366_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH58971.1|1292480_1293764_+	Trigger factor	NA	NA	NA	NA	NA
VEH58973.1|1293948_1295208_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
>prophage 3
LR134397	Listeria monocytogenes strain NCTC7973 genome assembly, chromosome: 1	2908293	1837958	1846244	2908293		Prochlorococcus_phage(33.33%)	8	NA	NA
VEH59957.1|1837958_1838525_-	Phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.1	1.3e-26
VEH59959.1|1838521_1839571_-	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	8.3e-64
VEH59961.1|1839589_1841017_-	Amidophosphoribosyltransferase precursor	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
VEH59963.1|1841001_1843221_-	Phosphoribosylformylglycinamidine synthase 2	NA	A6N228	Microbacterium_phage	41.2	1.0e-159
VEH59965.1|1843213_1843897_-	Phosphoribosylformylglycinamidine synthase 1	NA	NA	NA	NA	NA
VEH59967.1|1843900_1844146_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
VEH59969.1|1844157_1844871_-	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.7	2.7e-42
VEH59971.1|1844951_1846244_-	Adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 4
LR134397	Listeria monocytogenes strain NCTC7973 genome assembly, chromosome: 1	2908293	2505819	2513663	2908293		Streptococcus_phage(50.0%)	7	NA	NA
VEH60863.1|2505819_2506791_-	Putative sporulation transcription regulator WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
VEH60865.1|2506798_2507767_-	LPPG:FO 2-phospho-L-lactate transferase	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
VEH60867.1|2507768_2508644_-	glmZ(sRNA)-inactivating NTPase	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.2e-08
VEH60869.1|2508751_2510482_-	Phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	53.3	4.3e-174
VEH60871.1|2510523_2511567_-	Aldose 1-epimerase precursor	NA	NA	NA	NA	NA
VEH60873.1|2511601_2512585_-	UDP-glucose 4-epimerase	NA	A0A1V0SG19	Hokovirus	37.2	1.6e-48
VEH60875.1|2512703_2513663_-	Thioredoxin reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 5
LR134397	Listeria monocytogenes strain NCTC7973 genome assembly, chromosome: 1	2908293	2801123	2811155	2908293		Tupanvirus(33.33%)	6	NA	NA
VEH61425.1|2801123_2803277_-	DNA topoisomerase 3	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
VEH61427.1|2803300_2805073_-	ATP-dependent DNA helicase recQ	NA	A0A2K9L3P7	Tupanvirus	37.1	1.1e-79
VEH61429.1|2805233_2806700_-	Inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
VEH61431.1|2806985_2807516_-	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	2.6e-29
VEH61433.1|2807573_2809184_-	Uncharacterized ABC transporter ATP-binding protein HI_1252	NA	A0A2K9L3Z8	Tupanvirus	29.9	7.5e-48
VEH61435.1|2809700_2811155_+	Aryl-phospho-beta-D-glucosidase BglC	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
