The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134396	Providencia rustigianii strain NCTC8113 genome assembly, chromosome: 1	3864394	1493542	1500373	3864394		Escherichia_phage(25.0%)	16	NA	NA
VEH54999.1|1493542_1494826_-	site-specific tyrosine recombinase XerC	NA	A0A0P0ZGA8	Escherichia_phage	49.4	1.2e-120
VEH55000.1|1494833_1495070_-	Putative excisionase (DUF1233)	NA	S4TND0	Salmonella_phage	61.0	7.9e-23
VEH55001.1|1495062_1495308_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55003.1|1495279_1495474_-	Uncharacterised protein	NA	A0A1P8DTH3	Proteus_phage	79.7	1.2e-24
VEH55004.1|1495481_1496027_-	phage N-6-adenine-methyltransferase	NA	G9L688	Escherichia_phage	61.7	1.3e-57
VEH55005.1|1496016_1496235_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55006.1|1496388_1496565_-	Uncharacterised protein	NA	A0A1P8DTI7	Proteus_phage	92.0	8.2e-17
VEH55008.1|1496602_1497139_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55009.1|1497254_1497452_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55011.1|1497492_1497999_-	Helix-destabilizing protein	NA	C6ZR36	Salmonella_phage	63.1	7.3e-58
VEH55012.1|1497998_1498574_-	ERF superfamily	NA	A5VWA8	Enterobacteria_phage	64.8	1.7e-66
VEH55014.1|1498589_1498904_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55016.1|1498896_1499046_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55018.1|1499042_1499243_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55020.1|1499239_1499395_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55022.1|1499464_1500373_-	Uncharacterised protein	NA	A0A2I7QK72	Vibrio_phage	46.6	8.3e-20
>prophage 2
LR134396	Providencia rustigianii strain NCTC8113 genome assembly, chromosome: 1	3864394	1503664	1541770	3864394	holin,head	Morganella_phage(31.43%)	52	NA	NA
VEH55032.1|1503664_1504360_-	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	G8C7L8	Escherichia_phage	46.7	8.0e-47
VEH55033.1|1504467_1504653_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	NA	NA	NA	NA
VEH55035.1|1504759_1505104_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55036.1|1505173_1505863_+	T5orf172 domain	NA	NA	NA	NA	NA
VEH55037.1|1505862_1506648_+	Uncharacterised protein	NA	G8C7U5	Escherichia_phage	57.6	4.3e-81
VEH55038.1|1506647_1507376_+	DNA replication protein dnaC	NA	A0A1W6JP39	Morganella_phage	75.6	8.5e-100
VEH55039.1|1507391_1507616_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55040.1|1507647_1507920_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55041.1|1507919_1508243_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55042.1|1508229_1508478_+	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA	NA
VEH55043.1|1508477_1508753_+	Uncharacterised protein	NA	A0A1U9ZAA1	Proteus_phage	50.0	3.3e-20
VEH55044.1|1508755_1509127_+	Uncharacterised protein	NA	J7I4M3	Pseudomonas_phage	33.3	6.0e-09
VEH55045.1|1509129_1509351_+	Uncharacterised protein	NA	A0A1P8DTG8	Proteus_phage	57.6	4.1e-13
VEH55046.1|1509364_1509799_+	Protein of uncharacterised function (DUF1367)	NA	A0A096XEN2	Escherichia_phage	66.2	2.3e-52
VEH55047.1|1510257_1510548_+	82 prophage-derived uncharacterized protein ybcO	NA	A0A220NQY2	Salmonella_phage	75.0	1.4e-34
VEH55048.1|1510899_1511100_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55049.1|1511096_1511600_+	Phage antitermination protein Q	NA	A0A1P8DTF1	Proteus_phage	85.0	1.3e-78
VEH55050.1|1512369_1512687_+|holin	phage holin, lambda family	holin	A0A1P8DTE4	Proteus_phage	68.6	2.2e-36
VEH55051.1|1512679_1513072_+	Uncharacterised protein	NA	E7C9S9	Salmonella_phage	85.0	3.1e-56
VEH55052.1|1513068_1513470_+	Uncharacterised protein	NA	A0A1W6JNV2	Morganella_phage	49.6	4.1e-19
VEH55053.1|1513611_1513779_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55054.1|1514105_1514777_+	T5orf172 domain	NA	A0A2I7S3T0	Vibrio_phage	35.4	1.3e-06
VEH55055.1|1514947_1515187_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55056.1|1515444_1515690_+	Protein of uncharacterised function (DUF2560)	NA	NA	NA	NA	NA
VEH55057.1|1515743_1516346_+	Uncharacterised protein	NA	A0A077KBY7	Edwardsiella_phage	77.9	2.3e-74
VEH55058.1|1516348_1517833_+	Uncharacterised protein	NA	A0A1W6JNY3	Morganella_phage	86.8	1.4e-266
VEH55059.1|1517834_1519211_+	Uncharacterised protein	NA	A0A1W6JNV0	Morganella_phage	78.4	5.4e-212
VEH55060.1|1519219_1520284_+|head	phage head morphogenesis protein, SPP1 gp7 family	head	A0A1W6JNT7	Morganella_phage	50.3	1.5e-100
VEH55061.1|1520358_1521045_+	Uncharacterised protein	NA	A0A1W6JNU9	Morganella_phage	75.3	1.1e-67
VEH55062.1|1521050_1522001_+	Uncharacterised protein	NA	A0A1W6JNV5	Morganella_phage	84.3	2.4e-150
VEH55063.1|1522044_1522422_+	Uncharacterised protein	NA	A0A1W6JP09	Morganella_phage	59.7	1.5e-36
VEH55064.1|1522423_1522795_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55065.1|1522796_1523153_+	Uncharacterised protein	NA	A0A1W6JNX7	Morganella_phage	58.9	7.0e-31
VEH55066.1|1523149_1523518_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55067.1|1523579_1524320_+	Bacterial Ig-like domain (group 2)	NA	G0ZNE6	Cronobacter_phage	46.3	2.6e-51
VEH55068.1|1524368_1525055_+	Uncharacterised protein	NA	A0A1W6JNX2	Morganella_phage	54.5	8.7e-62
VEH55069.1|1525057_1525318_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55070.1|1525326_1525572_-	Arc-like DNA binding domain	NA	A0A0M5M1J2	Salmonella_phage	51.2	2.0e-16
VEH55071.1|1525839_1526844_+	Uncharacterised protein	NA	A0A0R6PIZ6	Moraxella_phage	31.6	3.7e-37
VEH55072.1|1526911_1527760_-	Phage anti-repressor protein	NA	Q8VNP5	Enterobacteria_phage	50.3	3.5e-28
VEH55073.1|1528130_1528349_+	Arc-like DNA binding domain	NA	A5VW60	Enterobacteria_phage	39.7	6.9e-05
VEH55074.1|1528449_1529295_+	Sporulation initiation inhibitor protein soj	NA	A0A1X9IGI7	Lactococcus_phage	36.0	1.5e-31
VEH55075.1|1529281_1529701_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55076.1|1530455_1531604_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55077.1|1531675_1534918_+	Uncharacterised protein	NA	A0A1W6JNU2	Morganella_phage	33.2	1.9e-37
VEH55078.1|1534927_1535551_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55079.1|1535583_1536066_+	Uncharacterised protein	NA	F1C5F0	Cronobacter_phage	66.3	7.4e-60
VEH55080.1|1536062_1536530_+	Domain of uncharacterised function (DUF1833)	NA	F1C5F1	Cronobacter_phage	53.6	8.8e-42
VEH55081.1|1536529_1536922_+	NlpC/P60 family	NA	F1C5F2	Cronobacter_phage	54.8	9.7e-42
VEH55082.1|1536908_1539383_+	Uncharacterised protein	NA	F1C5A7	Cronobacter_phage	48.8	1.1e-231
VEH55083.1|1539445_1541464_+	Zinc carboxypeptidase	NA	A0A1W6DXW6	Salmonella_phage	50.3	6.1e-31
VEH55084.1|1541611_1541770_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	66.7	2.2e-13
>prophage 3
LR134396	Providencia rustigianii strain NCTC8113 genome assembly, chromosome: 1	3864394	1900993	1925757	3864394	terminase,plate,tail,portal,capsid,head,lysis	Salmonella_phage(64.0%)	28	NA	NA
VEH55419.1|1900993_1902049_-|portal	phage portal protein, PBSX family	portal	A0A0M5M1H6	Salmonella_phage	56.8	1.6e-107
VEH55420.1|1902051_1903776_-	Uncharacterized conserved protein	NA	A0A0M4S6K7	Salmonella_phage	59.8	2.6e-195
VEH55421.1|1903924_1904746_+|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	A0A1J0I2E9	Salmonella_phage	37.9	1.4e-37
VEH55422.1|1904792_1905842_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M3ULA3	Salmonella_phage	53.2	1.0e-98
VEH55423.1|1905862_1906639_+|terminase	Phage small terminase subunit	terminase	B9A7B6	Serratia_phage	46.6	3.1e-47
VEH55424.1|1906748_1907237_+|head	Phage head completion protein (GPL)	head	A0A0M4QWR7	Salmonella_phage	53.7	1.6e-38
VEH55425.1|1907236_1907440_+	Phage Tail Protein X	NA	E5G6M9	Salmonella_phage	62.7	9.5e-17
VEH55426.1|1907458_1907746_+	Uncharacterised protein	NA	A0A1V0E5R8	Salmonella_phage	39.4	1.0e-08
VEH55427.1|1907747_1908284_+	Phage-related lysozyme (muraminidase)	NA	H6WRZ4	Salmonella_phage	61.2	2.7e-63
VEH55428.1|1908280_1908805_+|lysis	Bacteriophage lysis protein	lysis	S4TTP1	Salmonella_phage	31.5	4.1e-11
VEH55429.1|1908801_1908969_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH55430.1|1908971_1909433_+|tail	P2 phage tail completion protein R (GpR)	tail	V9IQM0	Stenotrophomonas_phage	31.1	1.0e-05
VEH55431.1|1909425_1910064_+	phage virion morphogenesis protein	NA	A0A0M4RCU1	Salmonella_phage	49.7	3.0e-40
VEH55432.1|1910060_1910690_+|plate	Phage P2 baseplate assembly protein gpV	plate	A0A0M4S6F6	Salmonella_phage	54.9	2.1e-54
VEH55433.1|1910686_1911028_+	Gene 25-like lysozyme	NA	A0A0M4RE59	Salmonella_phage	57.8	7.4e-30
VEH55434.1|1911032_1911944_+	Uncharacterized homolog of phage Mu protein gp47	NA	F1BUP3	Erwinia_phage	65.4	1.0e-105
VEH55435.1|1911936_1912548_+|tail	Bacteriophage P2-related tail formation protein	tail	F1BUP2	Erwinia_phage	65.8	1.0e-74
VEH55436.1|1912544_1913963_+	Uncharacterised protein	NA	F1BUP1	Erwinia_phage	66.5	9.2e-58
VEH55437.1|1913976_1914504_+|tail	Bacteriophage tail assembly protein	tail	F1BUK2	Cronobacter_phage	45.5	8.8e-30
VEH55438.1|1914544_1916017_-	Putative phosphoethanolamine transferase ybiP	NA	NA	NA	NA	NA
VEH55439.1|1916312_1916744_-	Phage protein U	NA	A0A1J0I2L5	Salmonella_phage	63.3	7.1e-46
VEH55440.1|1916747_1919912_-|tail	Phage-related minor tail protein	tail	A0A0A7NRZ9	Enterobacteria_phage	34.5	6.7e-125
VEH55441.1|1920057_1920360_-|tail	Phage tail protein E	tail	A0A0M4RCV2	Salmonella_phage	47.0	1.5e-13
VEH55442.1|1920381_1920894_-|tail	phage major tail tube protein	tail	A0A0M5M1I5	Salmonella_phage	65.3	6.7e-59
VEH55443.1|1920906_1922073_-|tail	Phage tail sheath protein	tail	A0A0M4S6M1	Salmonella_phage	65.4	1.2e-148
VEH55444.1|1922231_1923338_+	Phage protein D	NA	B9A7A9	Serratia_phage	63.3	1.2e-129
VEH55445.1|1923383_1923632_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
VEH55446.1|1923786_1925757_+	Predicted NTPase (NACHT family)	NA	X5JAK5	Clostridium_phage	36.9	3.2e-77
>prophage 4
LR134396	Providencia rustigianii strain NCTC8113 genome assembly, chromosome: 1	3864394	3322355	3330280	3864394	integrase	Enterobacteria_phage(33.33%)	9	3320594:3320607	3328803:3328816
3320594:3320607	attL	AAAAATTCAGGGGA	NA	NA	NA	NA
VEH56710.1|3322355_3323630_+|integrase	Prophage CP4-57 integrase	integrase	Q7M297	Enterobacteria_phage	38.8	7.2e-78
VEH56711.1|3323790_3323982_+|integrase	Putative prophage CPS-53 integrase	integrase	Q7M297	Enterobacteria_phage	70.6	1.7e-15
VEH56712.1|3324320_3324905_+	Antirestriction protein	NA	A0A0A8WIV6	Clostridium_phage	41.5	1.1e-25
VEH56713.1|3325347_3325539_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH56714.1|3325657_3325867_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH56715.1|3325890_3326913_-	UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	47.1	4.1e-84
VEH56716.1|3326922_3327912_-	Tyrosine-protein kinase etk	NA	NA	NA	NA	NA
VEH56717.1|3328063_3329230_-	UDP-glucose 6-dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	55.3	2.3e-115
3328803:3328816	attR	AAAAATTCAGGGGA	NA	NA	NA	NA
VEH56718.1|3329281_3330280_-	UDP-glucose 4-epimerase	NA	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	30.4	6.3e-37
>prophage 5
LR134396	Providencia rustigianii strain NCTC8113 genome assembly, chromosome: 1	3864394	3801579	3809400	3864394		Catovirus(33.33%)	7	NA	NA
VEH57128.1|3801579_3802746_+	UDP-glucose 6-dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	56.0	7.2e-117
VEH57129.1|3802748_3803507_+	Poly-beta-1,6-N-acetyl-D-glucosamine synthase	NA	A0A1V0SAH6	Catovirus	40.7	9.4e-17
VEH57130.1|3803517_3804669_+	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	NA	E5ES46	Bathycoccus_sp._RCC1105_virus	27.7	3.2e-16
VEH57131.1|3804668_3805280_+	Putative colanic biosynthesis UDP-glucose lipid carrier transferase	NA	NA	NA	NA	NA
VEH57132.1|3805589_3806570_-	Transposase DDE domain	NA	Q38213	Escherichia_phage	80.9	1.4e-153
VEH57133.1|3806704_3808354_+	UDP-glucose 4-epimerase	NA	A0A1V0SAI8	Catovirus	30.4	2.0e-27
VEH57134.1|3808374_3809400_+	UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	47.9	9.2e-84
