assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637745.1_52551_F01	LR134394	Listeria ivanovii subsp. londoniensis strain NCTC12701 genome assembly, chromosome: 1	1	492466-497378	1,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas9,cas1,cas2	csa3,DinG,cas3,WYL,RT,cas9,cas1,cas2,DEDDh,cas14j,csn2	 Type II-B,Type II-A,Type II-B,Type II-C, or Type II-C?	ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT,ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT,ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT,ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT,ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT	36,36,36,36,36	1	1	492898-492927	LR134394.1_1283251-1283222	NA:NA:NA:NA:NA	74,74,67,67,67	74	TypeII-B,TypeII-A,TypeII-B,TypeII-C,orTypeII-C?	csa3,DinG,cas3,WYL,RT,cas9,cas1,cas2,DEDDh,cas14j,csn2	NA|184aa|up_8|LR134394.1_476145_476697_+,NA|321aa|up_0|LR134394.1_491480_492443_+,NA	NA|188aa|up_9|LR134394.1_475279_475843_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|184aa|up_8|LR134394.1_476145_476697_+	NA	NA|194aa|up_7|LR134394.1_476687_477269_+	pfam08747, DUF1788, Domain of unknown function (DUF1788)	NA|1194aa|up_6|LR134394.1_477284_480866_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|1163aa|up_5|LR134394.1_480880_484369_+	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|815aa|up_4|LR134394.1_484378_486823_+	TIGR02687, conserved_hypothetical_protein, TIGR02687 family protein	cas9|1080aa|up_3|LR134394.1_486883_490123_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|301aa|up_2|LR134394.1_490268_491171_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|77aa|up_1|LR134394.1_491253_491484_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|321aa|up_0|LR134394.1_491480_492443_+	NA	NA|415aa|down_0|LR134394.1_497955_499200_+	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold	NA|297aa|down_1|LR134394.1_499267_500158_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|279aa|down_2|LR134394.1_500160_500997_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|810aa|down_3|LR134394.1_501012_503442_+	cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38)	NA|290aa|down_4|LR134394.1_503455_504325_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|482aa|down_5|LR134394.1_504287_505733_+	pfam06824, Glyco_hydro_125, Metal-independent alpha-mannosidase (GH125)	NA|291aa|down_6|LR134394.1_505821_506694_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|583aa|down_7|LR134394.1_506815_508564_+	cd07010, cupin_PMI_type_I_N_bac, Phosphomannose isomerase in bacteria and archaea, N-terminal cupin domain	NA|472aa|down_8|LR134394.1_508729_510145_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|335aa|down_9|LR134394.1_510272_511277_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
GCA_900637745.1_52551_F01	LR134394	Listeria ivanovii subsp. londoniensis strain NCTC12701 genome assembly, chromosome: 1	3	2766109-2766936	4,3,2	PILER-CR,CRISPRCasFinder,CRT	no	csn2,cas2,cas1,cas9	csa3,DinG,cas3,WYL,RT,cas9,cas1,cas2,DEDDh,cas14j,csn2	Type II-C,Type II-A,Type II-B	GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC,GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC,GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	12,12,12	12	TypeII-C,TypeII-A,TypeII-B	csa3,DinG,cas3,WYL,RT,cas9,cas1,cas2,DEDDh,cas14j,csn2	NA|62aa|up_4|LR134394.1_2762970_2763156_-,NA|122aa|up_3|LR134394.1_2763319_2763685_+,NA|65aa|up_2|LR134394.1_2763796_2763991_-,NA|175aa|up_1|LR134394.1_2764751_2765276_-,NA|96aa|up_0|LR134394.1_2765229_2765517_-,NA|125aa|down_5|LR134394.1_2774140_2774515_-	NA|496aa|up_9|LR134394.1_2750939_2752427_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|296aa|up_8|LR134394.1_2752521_2753409_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|62aa|up_7|LR134394.1_2753552_2753738_-	pfam11313, DUF3116, Protein of unknown function (DUF3116)	NA|343aa|up_6|LR134394.1_2759811_2760840_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|509aa|up_5|LR134394.1_2761243_2762770_+	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|62aa|up_4|LR134394.1_2762970_2763156_-	NA	NA|122aa|up_3|LR134394.1_2763319_2763685_+	NA	NA|65aa|up_2|LR134394.1_2763796_2763991_-	NA	NA|175aa|up_1|LR134394.1_2764751_2765276_-	NA	NA|96aa|up_0|LR134394.1_2765229_2765517_-	NA	csn2|221aa|down_0|LR134394.1_2767053_2767716_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|LR134394.1_2767705_2768047_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_2|LR134394.1_2768043_2768910_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1335aa|down_3|LR134394.1_2768910_2772915_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|152aa|down_4|LR134394.1_2773695_2774151_-	pfam14567, SUKH_5, SMI1-KNR4 cell-wall	NA|125aa|down_5|LR134394.1_2774140_2774515_-	NA	NA|474aa|down_6|LR134394.1_2774540_2775962_-	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|131aa|down_7|LR134394.1_2776351_2776744_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|146aa|down_8|LR134394.1_2776765_2777203_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|249aa|down_9|LR134394.1_2777385_2778132_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA
