assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637605.1_52121_H02	LR134381	Corynebacterium kutscheri strain NCTC11138 genome assembly, chromosome: 1	1	311237-312241	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	16,16,15	16	TypeI-E	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|213aa|up_1|LR134381.1_310479_311118_-,NA|30aa|up_0|LR134381.1_311114_311204_-,NA|182aa|down_1|LR134381.1_314599_315145_+,NA|84aa|down_3|LR134381.1_315450_315702_+,NA|179aa|down_4|LR134381.1_315841_316378_+	NA|339aa|up_9|LR134381.1_301318_302335_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|262aa|up_8|LR134381.1_302386_303172_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|317aa|up_7|LR134381.1_303174_304125_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|350aa|up_6|LR134381.1_304313_305363_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|371aa|up_5|LR134381.1_305359_306472_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|266aa|up_4|LR134381.1_306763_307561_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|355aa|up_3|LR134381.1_307661_308726_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|494aa|up_2|LR134381.1_308858_310340_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|213aa|up_1|LR134381.1_310479_311118_-	NA	NA|30aa|up_0|LR134381.1_311114_311204_-	NA	NA|341aa|down_0|LR134381.1_312479_313502_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|down_1|LR134381.1_314599_315145_+	NA	NA|118aa|down_2|LR134381.1_315113_315467_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|down_3|LR134381.1_315450_315702_+	NA	NA|179aa|down_4|LR134381.1_315841_316378_+	NA	cas2|115aa|down_5|LR134381.1_316583_316928_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|258aa|down_6|LR134381.1_316924_317698_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|70aa|down_7|LR134381.1_317694_317904_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|220aa|down_8|LR134381.1_317906_318566_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_9|LR134381.1_318565_319267_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5
GCA_900637605.1_52121_H02	LR134381	Corynebacterium kutscheri strain NCTC11138 genome assembly, chromosome: 1	2	313946-314019	2	CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	ATCCCCGCTCGCGCGGGGACAAC	23	0	0	NA	NA	NA	1	1	TypeI-E	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|213aa|up_3|LR134381.1_310479_311118_-,NA|30aa|up_2|LR134381.1_311114_311204_-,NA|180aa|up_1|LR134381.1_311707_312247_+,NA|182aa|down_0|LR134381.1_314599_315145_+,NA|84aa|down_2|LR134381.1_315450_315702_+,NA|179aa|down_3|LR134381.1_315841_316378_+	NA|317aa|up_9|LR134381.1_303174_304125_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|350aa|up_8|LR134381.1_304313_305363_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|371aa|up_7|LR134381.1_305359_306472_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|266aa|up_6|LR134381.1_306763_307561_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|355aa|up_5|LR134381.1_307661_308726_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|494aa|up_4|LR134381.1_308858_310340_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|213aa|up_3|LR134381.1_310479_311118_-	NA	NA|30aa|up_2|LR134381.1_311114_311204_-	NA	NA|180aa|up_1|LR134381.1_311707_312247_+	NA	NA|341aa|up_0|LR134381.1_312479_313502_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|down_0|LR134381.1_314599_315145_+	NA	NA|118aa|down_1|LR134381.1_315113_315467_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|down_2|LR134381.1_315450_315702_+	NA	NA|179aa|down_3|LR134381.1_315841_316378_+	NA	cas2|115aa|down_4|LR134381.1_316583_316928_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|258aa|down_5|LR134381.1_316924_317698_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|70aa|down_6|LR134381.1_317694_317904_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|220aa|down_7|LR134381.1_317906_318566_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_8|LR134381.1_318565_319267_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|381aa|down_9|LR134381.1_319263_320406_-	pfam09344, Cas_CT1975, CT1975-like protein
GCA_900637605.1_52121_H02	LR134381	Corynebacterium kutscheri strain NCTC11138 genome assembly, chromosome: 1	3	316329-316539	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	TypeI-E	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|213aa|up_6|LR134381.1_310479_311118_-,NA|30aa|up_5|LR134381.1_311114_311204_-,NA|180aa|up_4|LR134381.1_311707_312247_+,NA|182aa|up_2|LR134381.1_314599_315145_+,NA|84aa|up_0|LR134381.1_315450_315702_+,NA	NA|266aa|up_9|LR134381.1_306763_307561_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|355aa|up_8|LR134381.1_307661_308726_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|494aa|up_7|LR134381.1_308858_310340_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|213aa|up_6|LR134381.1_310479_311118_-	NA	NA|30aa|up_5|LR134381.1_311114_311204_-	NA	NA|180aa|up_4|LR134381.1_311707_312247_+	NA	NA|341aa|up_3|LR134381.1_312479_313502_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|up_2|LR134381.1_314599_315145_+	NA	NA|118aa|up_1|LR134381.1_315113_315467_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|up_0|LR134381.1_315450_315702_+	NA	cas2|115aa|down_0|LR134381.1_316583_316928_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|258aa|down_1|LR134381.1_316924_317698_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|70aa|down_2|LR134381.1_317694_317904_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|220aa|down_3|LR134381.1_317906_318566_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_4|LR134381.1_318565_319267_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|381aa|down_5|LR134381.1_319263_320406_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_6|LR134381.1_320445_321078_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|550aa|down_7|LR134381.1_321058_322708_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|954aa|down_8|LR134381.1_322801_325663_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|182aa|down_9|LR134381.1_326191_326737_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA
GCA_900637605.1_52121_H02	LR134381	Corynebacterium kutscheri strain NCTC11138 genome assembly, chromosome: 1	4	1288273-1288849	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no		DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Orphan	GTTGTCCCCGCTCGCGCGGGGATGTTCC,GTTGTCCCCGCTCGCGCGGGGATGTTCC,GTTGTCCCCGCTCGCGCGGGGATGTTCC	28,28,28	0	0	NA	NA	NA:NA:NA	9,9,9	9	Orphan	DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|31aa|up_7|LR134381.1_1278203_1278296_-,NA|84aa|up_3|LR134381.1_1279479_1279731_-,NA|107aa|up_0|LR134381.1_1281145_1281466_-,NA|100aa|down_0|LR134381.1_1289018_1289318_-	NA|564aa|up_9|LR134381.1_1275718_1277410_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|212aa|up_8|LR134381.1_1277419_1278055_+	pfam11580, DUF3239, Protein of unknown function (DUF3239)	NA|31aa|up_7|LR134381.1_1278203_1278296_-	NA	NA|69aa|up_6|LR134381.1_1278341_1278548_+	cd03226, ABC_cobalt_CbiO_domain2, Second domain of the ATP-binding cassette component of cobalt transport system	NA|80aa|up_5|LR134381.1_1278550_1278790_-	cd03249, ABC_MTABC3_MDL1_MDL2, ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins	NA|222aa|up_4|LR134381.1_1278808_1279474_-	cd03251, ABCC_MsbA, ATP-binding cassette domain of the bacterial lipid flippase and related proteins, subfamily C	NA|84aa|up_3|LR134381.1_1279479_1279731_-	NA	NA|155aa|up_2|LR134381.1_1279788_1280253_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|290aa|up_1|LR134381.1_1280249_1281119_-	cd03253, ABCC_ATM1_transporter, ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C	NA|107aa|up_0|LR134381.1_1281145_1281466_-	NA	NA|100aa|down_0|LR134381.1_1289018_1289318_-	NA	NA|252aa|down_1|LR134381.1_1289317_1290073_-	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]	NA|356aa|down_2|LR134381.1_1290069_1291137_-	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|332aa|down_3|LR134381.1_1291129_1292125_-	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|337aa|down_4|LR134381.1_1292223_1293234_-	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|361aa|down_5|LR134381.1_1293551_1294634_+	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]	NA|253aa|down_6|LR134381.1_1294630_1295389_-	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins	NA|523aa|down_7|LR134381.1_1296350_1297919_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)	NA|387aa|down_8|LR134381.1_1297915_1299076_+	cd17268, RMtype1_S_Ara36733I_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|1042aa|down_9|LR134381.1_1299072_1302198_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
