The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	46794	112064	4610200	integrase,tRNA,transposase	Enterobacteria_phage(26.67%)	57	43349:43366	100468:100485
43349:43366	attL	ATGCGGATAAACCCCAGC	NA	NA	NA	NA
VEG85703.1|46794_48768_+|tRNA	selenocysteinyl-tRNA-specific translation factor	tRNA	A0A2K9KZ60	Tupanvirus	25.1	1.1e-11
VEG85704.1|48774_49239_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	85.0	5.9e-62
VEG85705.1|49677_50886_+|transposase	transposase for the IS285 insertion element	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
VEG85706.1|51196_51778_-	putative inner membrane protein	NA	NA	NA	NA	NA
VEG85707.1|51856_52015_-	putative inner membrane protein	NA	NA	NA	NA	NA
VEG85708.1|52135_52339_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG85709.1|52487_53717_-	multidrug translocase	NA	NA	NA	NA	NA
VEG85710.1|54574_55567_+	acyltransferase	NA	NA	NA	NA	NA
VEG85711.1|56448_57006_+	fimbrial protein	NA	NA	NA	NA	NA
VEG85712.1|57120_59580_+	outer membrane fimbrial usher porin	NA	NA	NA	NA	NA
VEG85713.1|59711_60440_+	fimbrial chaperone	NA	NA	NA	NA	NA
VEG85714.1|60481_61465_+	fimbrial protein	NA	NA	NA	NA	NA
VEG85715.1|61563_63018_-	xylulose kinase	NA	NA	NA	NA	NA
VEG85716.1|63141_64461_-	xylose isomerase	NA	NA	NA	NA	NA
VEG85717.1|64923_65919_+	D-xylose transporter subunit XylF	NA	NA	NA	NA	NA
VEG85718.1|66126_67659_+	xylose transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	8.5e-17
VEG85719.1|67645_68830_+	sugar transport system permease	NA	NA	NA	NA	NA
VEG85720.1|68919_70113_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
VEG85721.1|70581_71796_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	70.7	5.9e-162
VEG85722.1|72113_72380_+	putative putative SinR-like protein	NA	NA	NA	NA	NA
VEG85723.1|72435_73014_+	Type I restriction modification DNA specificity domain	NA	NA	NA	NA	NA
VEG85724.1|73020_74544_+	type I site-specific deoxyribonuclease LldI	NA	A0A2H4PQP4	Staphylococcus_phage	37.9	1.7e-89
VEG85725.1|74533_75763_+	restriction modification enzyme	NA	NA	NA	NA	NA
VEG85726.1|75759_76806_+	Virulence protein	NA	Q9JMN3	Wolbachia_phage	44.1	3.4e-73
VEG85727.1|76802_80081_+	type I restriction enzyme restriction subunit	NA	A0A220A398	Liberibacter_phage	27.3	1.7e-59
VEG85728.1|80084_80822_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
VEG85729.1|80957_81872_+	restriction endonuclease	NA	NA	NA	NA	NA
VEG85730.1|82053_82674_-	Protein of uncharacterised function (DUF3296)	NA	NA	NA	NA	NA
VEG85731.1|83347_83632_+|transposase	IS100 transposase	transposase	U5N3V8	Enterobacteria_phage	93.6	2.2e-43
VEG85732.1|83685_84312_+	GTPase	NA	NA	NA	NA	NA
VEG85733.1|84559_85114_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG85734.1|85141_85762_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG85735.1|85944_86424_+	DNA repair protein RadC	NA	NA	NA	NA	NA
VEG85736.1|86435_86771_+	YagBYeeUYfjZ family protein	NA	NA	NA	NA	NA
VEG85737.1|86727_87192_+	ypjf toxin protein	NA	NA	NA	NA	NA
VEG85738.1|87418_88273_+	z1226 protein	NA	NA	NA	NA	NA
VEG85739.1|88647_88920_+|integrase	phage integrase family site specific recombinase	integrase	Q7M297	Enterobacteria_phage	81.4	8.8e-26
VEG85740.1|89154_89562_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG85741.1|89584_89911_+	Virulence protein	NA	NA	NA	NA	NA
VEG85742.1|89852_90353_+	Virulence protein	NA	Q9JMN3	Wolbachia_phage	49.4	1.0e-35
VEG85743.1|90349_91108_-	putative iron ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	9.4e-17
VEG85744.1|91104_92112_-	iron transport permease	NA	NA	NA	NA	NA
VEG85745.1|92101_93061_-	putative iron transport permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	39.3	2.7e-61
VEG85746.1|93070_94024_-	solute-binding iron ABC transport protein	NA	NA	NA	NA	NA
VEG85747.1|94546_95791_-	acetyl-CoA carboxylase	NA	NA	NA	NA	NA
VEG85748.1|95792_96722_-	EamA-like transporter family	NA	NA	NA	NA	NA
VEG85749.1|96804_97353_-	adenine phosphoribosyltransferase	NA	NA	NA	NA	NA
VEG85750.1|97345_97669_-	pyridoxal-phosphate dependent protein	NA	NA	NA	NA	NA
VEG85751.1|98395_100087_+	urocanate hydratase	NA	NA	NA	NA	NA
VEG85752.1|100083_101616_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	39.1	8.1e-84
100468:100485	attR	GCTGGGGTTTATCCGCAT	NA	NA	NA	NA
VEG85753.1|102001_103405_+	amino acid permease family protein	NA	NA	NA	NA	NA
VEG85754.1|103872_105336_+	membrane protein	NA	NA	NA	NA	NA
VEG85755.1|105882_107574_+	phosphoethanolamine transferase	NA	NA	NA	NA	NA
VEG85756.1|107689_108280_+	two-component system response regulator	NA	NA	NA	NA	NA
VEG85757.1|108276_109806_+	sensory histidine kinase UhpB	NA	NA	NA	NA	NA
VEG85758.1|109900_111232_+	regulatory protein UhpC	NA	NA	NA	NA	NA
VEG85759.1|111605_112064_+|transposase	transposase for IS1541	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 2
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	2422386	2432076	4610200	transposase,tail	Erwinia_phage(60.0%)	17	NA	NA
VEG87683.1|2422386_2422491_-|transposase	transposase	transposase	NA	NA	NA	NA
VEG87684.1|2423168_2423603_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87685.1|2423614_2424184_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87686.1|2424371_2424545_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87687.1|2424601_2424940_-|transposase	transposase	transposase	NA	NA	NA	NA
VEG87688.1|2424939_2425800_-|transposase	putative transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	27.9	7.1e-21
VEG87689.1|2425847_2426924_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87690.1|2426989_2427280_-	Uncharacterized protein conserved in bacteria	NA	K4NZP3	Burkholderia_phage	39.4	1.8e-05
VEG87691.1|2427260_2427533_-	Protein of uncharacterised function (DUF497)	NA	NA	NA	NA	NA
VEG87692.1|2427668_2427923_+	phage-like protein	NA	F1BUP5	Erwinia_phage	61.1	3.1e-17
VEG87693.1|2427919_2428219_+	phage-like protein	NA	A0A218M4K8	Erwinia_phage	64.9	2.6e-23
VEG87694.1|2428957_2429173_+	membrane protein	NA	NA	NA	NA	NA
VEG87695.1|2429169_2429475_+	Protein of uncharacterised function (DUF2778)	NA	NA	NA	NA	NA
VEG87696.1|2429455_2429734_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87697.1|2429898_2430039_+|tail	putative major tail sheath protein	tail	F1BUU3	Erwinia_phage	87.2	2.2e-12
VEG87698.1|2430149_2431436_+|transposase	putative transposase	transposase	NA	NA	NA	NA
VEG87699.1|2431773_2432076_+|transposase	transposase-like protein	transposase	NA	NA	NA	NA
>prophage 3
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	2440168	2480424	4610200	capsid,integrase,holin,plate,transposase,terminase,portal,tail	Salmonella_phage(41.67%)	59	2440727:2440741	2467146:2467160
VEG87709.1|2440168_2440588_+|transposase	transposase IS3/IS911 family protein	transposase	NA	NA	NA	NA
VEG87710.1|2440659_2441619_+|transposase	putative transposase	transposase	NA	NA	NA	NA
2440727:2440741	attL	AAAGAACTACGGCGA	NA	NA	NA	NA
VEG87711.1|2441838_2442183_+	hemolysin-coregulated protein	NA	NA	NA	NA	NA
VEG87712.1|2442208_2442424_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87713.1|2442453_2442636_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87714.1|2442827_2443001_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87715.1|2443074_2443221_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87716.1|2443244_2443367_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87717.1|2444275_2444614_+|integrase	integrase	integrase	H9C152	Pectobacterium_phage	63.5	8.7e-31
VEG87718.1|2445081_2445816_-|integrase	integrase family protein	integrase	Q94N03	Haemophilus_virus	63.0	1.3e-76
VEG87719.1|2445820_2447029_-|transposase	transposase for the IS285 insertion element	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
VEG87720.1|2447090_2447408_-|integrase	bacteriophage integrase	integrase	E5G6L0	Salmonella_phage	48.5	1.3e-20
VEG87721.1|2447407_2447788_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87722.1|2447856_2448276_-|integrase	bacteriophage integrase	integrase	E5G6L0	Salmonella_phage	46.6	1.1e-22
VEG87723.1|2448296_2449994_-	T5orf172 domain	NA	A0A142LP25	Marinitoga_camini_virus	62.5	9.0e-76
VEG87724.1|2450014_2450383_-	prophage transcriptional regulator	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	39.8	5.2e-13
VEG87725.1|2450443_2450635_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87726.1|2450647_2450851_+	DNA-binding protein	NA	NA	NA	NA	NA
VEG87727.1|2450862_2451069_+	phage-like protein	NA	NA	NA	NA	NA
VEG87728.1|2451065_2451380_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87729.1|2451364_2451511_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87730.1|2451521_2451782_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87731.1|2451812_2452118_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87732.1|2452200_2452968_+	putative exported phage-related protein	NA	K7ZRM8	Xanthomonas_citri_phage	49.3	1.9e-09
VEG87733.1|2453024_2453678_+	Orf81 bacteriophage 186	NA	A0A1D9C9N8	Salinivibrio_phage	61.8	1.5e-55
VEG87734.1|2453674_2454442_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	57.1	7.2e-73
VEG87735.1|2454490_2454586_+	C-5 cytosine-specific DNA methylase	NA	NA	NA	NA	NA
VEG87736.1|2454582_2457138_+	phage replication protein	NA	E5G6L9	Salmonella_phage	37.8	2.0e-127
VEG87737.1|2457118_2457349_+	phage-like protein	NA	NA	NA	NA	NA
VEG87738.1|2457345_2457690_+	bacteriophage protein gp46	NA	H9C172	Pectobacterium_phage	42.6	1.3e-18
VEG87739.1|2458386_2458641_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87740.1|2458789_2459827_-|portal	PBSX family phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	63.3	1.0e-130
VEG87741.1|2459826_2461590_-|terminase	gpP phage P2 terminase	terminase	A0A1S6KZW3	Salmonella_phage	63.4	4.4e-227
VEG87742.1|2461766_2462582_+	V protein phage 186	NA	E5G6M5	Salmonella_phage	71.1	1.3e-75
VEG87743.1|2462618_2463674_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	62.8	2.1e-123
VEG87744.1|2463680_2464334_+	R protein bacteriophage 186 gb|AAC34151.1|	NA	F1BUQ7	Erwinia_phage	46.8	1.7e-43
VEG87745.1|2464567_2465059_+	orf4 of phage P2 (gene L)	NA	A0A1S5NNA6	Burkholderia_phage	48.4	7.9e-33
VEG87746.1|2465058_2465262_+|tail	WPhiphage-related tail protein	tail	E5G6M9	Salmonella_phage	70.1	1.8e-23
VEG87747.1|2465291_2465678_+|holin	putative phage holin	holin	NA	NA	NA	NA
VEG87748.1|2465664_2466060_+	bacteriophage P7-like protein	NA	A9DET4	Yersinia_phage	71.8	3.5e-47
VEG87749.1|2466064_2466490_+	putative LysB protein-like protein	NA	E5G6N2	Salmonella_phage	48.2	9.2e-22
VEG87750.1|2466588_2467056_+|tail	P2 phage tail completion protein R	tail	F1BUP9	Erwinia_phage	57.2	1.8e-42
VEG87751.1|2467052_2467499_+	O protein	NA	A0A1S6L001	Salmonella_phage	50.7	7.7e-35
2467146:2467160	attR	AAAGAACTACGGCGA	NA	NA	NA	NA
VEG87752.1|2467517_2467748_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87753.1|2467830_2468532_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87754.1|2468619_2468742_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG87755.1|2468862_2469498_+|plate	phage baseplate assembly protein V	plate	O80314	Escherichia_phage	62.0	1.3e-64
VEG87756.1|2469494_2469848_+|plate	phage baseplate assembly protein W	plate	A0A218M4K8	Erwinia_phage	59.3	2.4e-31
VEG87757.1|2469850_2470759_+	bacteriophage P2-like protein	NA	F1BUP3	Erwinia_phage	73.2	1.3e-118
VEG87758.1|2470751_2471360_+	bacteriophage P2 protein	NA	F1BUP2	Erwinia_phage	75.0	1.7e-85
VEG87759.1|2471356_2472796_+|tail	tail fiber protein	tail	F1BUP1	Erwinia_phage	77.8	3.8e-75
VEG87760.1|2472807_2473287_+|tail	putative tail fiber assembly protein	tail	F1BUP0	Erwinia_phage	41.9	2.6e-28
VEG87761.1|2473420_2474596_+|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	79.6	1.8e-179
VEG87762.1|2474607_2475123_+|tail	tail tube protein	tail	A0A218M4J0	Erwinia_phage	66.3	2.5e-61
VEG87763.1|2475176_2475659_+|tail	tail protein	tail	Q858U8	Yersinia_virus	52.9	2.4e-34
VEG87764.1|2475651_2478567_+|tail	tail fiber component T of bacteriophage P2	tail	Q9ZXK0	Pseudomonas_virus	52.8	2.6e-155
VEG87765.1|2478581_2479043_+	phage P2 GpU	NA	E5G6Q2	Salmonella_phage	56.0	2.1e-43
VEG87766.1|2479039_2480134_+	late control gene D protein	NA	A0A1S6KZZ5	Salmonella_phage	65.7	1.9e-127
VEG87767.1|2480208_2480424_+	Phage transcriptional activator, Ogr/Delta	NA	S4TNZ3	Salmonella_phage	60.6	1.1e-18
>prophage 4
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	3008466	3034464	4610200	plate,coat,transposase,protease,tail	Pseudomonas_phage(18.75%)	29	NA	NA
VEG88218.1|3008466_3009675_-|transposase	transposase for the IS285 insertion element	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
VEG88219.1|3010167_3010530_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG88220.1|3010655_3012092_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
VEG88221.1|3012088_3012214_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG88222.1|3012382_3013123_-	LacI family regulatory protein	NA	NA	NA	NA	NA
VEG88223.1|3013420_3014200_-|tail	putative bacteriophage tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	51.9	1.6e-51
VEG88224.1|3014296_3014899_-	bacteriophage protein GP48	NA	A0A2P9JZK7	Alteromonadaceae_phage	38.6	2.0e-33
VEG88225.1|3014895_3016032_-	putative bacteriophage protein	NA	B5TK75	Pseudomonas_phage	30.5	3.5e-31
VEG88226.1|3016035_3016491_-	putative bacteriophage protein GP46	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
VEG88227.1|3016487_3017084_-|plate	putative bacteriophage (baseplate assembly) protein	plate	NA	NA	NA	NA
VEG88228.1|3017296_3018154_-|tail	putative bacteriophage tail protein	tail	M4M9L5	Vibrio_phage	34.3	1.0e-27
VEG88229.1|3018150_3019557_-	putative bacteriophage protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
VEG88230.1|3019823_3021317_-|coat	putative bacteriophage coat protein	coat	NA	NA	NA	NA
VEG88231.1|3021437_3021737_-	bacteriophage protein	NA	NA	NA	NA	NA
VEG88232.1|3021738_3022107_-|tail	Phage tail tube protein	tail	NA	NA	NA	NA
VEG88233.1|3022128_3023637_-|tail	putative bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	44.4	2.8e-105
VEG88234.1|3023633_3023828_-	putative bacteriophage protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
VEG88235.1|3023832_3024450_-	putative ATP-binding protein	NA	NA	NA	NA	NA
VEG88236.1|3024495_3024786_-	putative bacteriophage protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
VEG88237.1|3025381_3026176_-	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
VEG88238.1|3026151_3026961_-	transcriptional regulator	NA	NA	NA	NA	NA
VEG88239.1|3026966_3027698_-	putative aldolase	NA	A0A077SK32	Escherichia_phage	54.7	2.6e-56
VEG88240.1|3027694_3028999_-	Hrp-dependent type III effector protein	NA	A0A077SLJ7	Escherichia_phage	46.2	3.4e-91
VEG88241.1|3029209_3029689_-	putative phage antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	1.8e-37
VEG88242.1|3029962_3030685_+	putative prophage repressor protein	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
VEG88243.1|3030890_3031133_+	putative stress response protein	NA	K7PKR6	Enterobacteria_phage	65.0	6.9e-22
VEG88244.1|3031304_3032240_+|protease	outer membrane protease	protease	NA	NA	NA	NA
VEG88245.1|3032211_3032373_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG88246.1|3032676_3034464_+	methyl-accepting chemotaxis transmembrane protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
>prophage 5
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	3540817	3592200	4610200	capsid,head,integrase,holin,transposase,tRNA,terminase,portal,tail	Cronobacter_phage(61.76%)	56	3526180:3526195	3591737:3591752
3526180:3526195	attL	TGGCGGTTTTGCCATT	NA	NA	NA	NA
VEG88678.1|3540817_3542473_-	phage-like protein	NA	F1BUJ7	Cronobacter_phage	52.8	1.1e-166
VEG88679.1|3542469_3543018_-	phage-like protein	NA	F1BUJ9	Cronobacter_phage	63.7	4.8e-55
VEG88680.1|3542983_3543715_-	phage-like protein	NA	F1BUK1	Cronobacter_phage	39.6	9.9e-40
VEG88681.1|3543704_3544154_-|tail	tail assembly chaperone gp38	tail	NA	NA	NA	NA
VEG88682.1|3544155_3545787_-|tail	tail fiber repeat 2-containing protein	tail	F1BUK3	Cronobacter_phage	47.1	3.5e-69
VEG88683.1|3545797_3546433_-	phage-like protein	NA	F1BUK5	Cronobacter_phage	56.9	5.9e-57
VEG88684.1|3546425_3547610_-	bacteriophage protein	NA	F1BUK6	Cronobacter_phage	65.7	2.3e-150
VEG88685.1|3547602_3547935_-	phage-like protein	NA	F1BUK8	Cronobacter_phage	68.3	1.5e-35
VEG88686.1|3547934_3549911_-|tail	TP901 family phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	48.5	2.0e-172
VEG88687.1|3550098_3550365_-	phage-like protein	NA	A5X9I7	Aeromonas_virus	54.9	1.0e-18
VEG88688.1|3550514_3550856_-	phage-like protein	NA	F1BUL2	Cronobacter_phage	40.9	6.3e-13
VEG88689.1|3550855_3551197_-	phage-like protein	NA	F1BUL3	Cronobacter_phage	82.2	1.5e-43
VEG88690.1|3551193_3551484_-|holin	holin family protein 2	holin	Q6K1I2	Salmonella_virus	52.8	2.2e-14
VEG88691.1|3551493_3551946_-|tail	putative tail tube protein	tail	F1BUL4	Cronobacter_phage	59.5	2.4e-44
VEG88692.1|3551942_3553082_-|tail	putative tail sheath protein	tail	F1BUL5	Cronobacter_phage	65.7	3.0e-136
VEG88693.1|3553108_3553780_-	phage-like protein	NA	F1BUL6	Cronobacter_phage	68.3	8.2e-81
VEG88694.1|3553782_3554271_-	phage-like protein	NA	F1BUL7	Cronobacter_phage	41.8	1.5e-31
VEG88695.1|3554267_3554720_-|head	head completion protein	head	F1BUL8	Cronobacter_phage	56.7	5.2e-39
VEG88696.1|3554815_3555514_-|terminase	small terminase subunit	terminase	F1BUM0	Cronobacter_phage	52.6	2.5e-64
VEG88697.1|3555524_3556556_-|capsid	P2 family phage major capsid protein	capsid	F1BUM2	Cronobacter_phage	76.1	2.1e-144
VEG88698.1|3556610_3557465_-|capsid	putative capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	48.8	1.1e-66
VEG88699.1|3557631_3559419_+	orf16-like phage protein	NA	F1BUM5	Cronobacter_phage	66.6	3.1e-236
VEG88700.1|3559415_3560438_+|portal	PBSX family phage portal protein	portal	F1BUM7	Cronobacter_phage	69.4	1.8e-140
VEG88701.1|3560488_3560749_+	transcriptional activator Ogr/delta	NA	F1BUM8	Cronobacter_phage	64.3	7.6e-27
VEG88702.1|3560792_3563198_-	phage replication protein	NA	F1BUS0	Erwinia_phage	51.9	2.4e-207
VEG88703.1|3563194_3564118_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	53.5	5.6e-80
VEG88704.1|3564114_3564759_-	Orf81 bacteriophage 186	NA	A0A1D9C9N8	Salinivibrio_phage	61.7	2.1e-57
VEG88705.1|3564755_3565445_-	putative exported phage-related protein	NA	A0A1P8DUQ0	Escherichia_phage	50.7	2.4e-11
VEG88706.1|3565515_3565872_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG88707.1|3565886_3566108_-	phage-like protein	NA	NA	NA	NA	NA
VEG88708.1|3566151_3566430_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG88709.1|3566544_3566901_-	bacteriophage regulatory protein	NA	NA	NA	NA	NA
VEG88710.1|3567009_3567309_+	bacteriophage CI repressor protein	NA	Q1JS29	Enterobacteria_phage	61.6	2.3e-27
VEG88711.1|3567375_3568374_+|integrase	integrase	integrase	A0A0F7LBR0	Escherichia_phage	59.9	3.5e-112
VEG88712.1|3568762_3569221_-|transposase	transposase for IS1541	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
VEG88713.1|3569504_3570662_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
VEG88714.1|3570766_3571888_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
VEG88715.1|3571900_3572977_-	phospho-2-dehydro-3-deoxyheptonate aldolase	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.4	1.5e-89
VEG88716.1|3573203_3573920_+	two-component response-regulatory protein YehT	NA	NA	NA	NA	NA
VEG88717.1|3574352_3575696_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
VEG88718.1|3576018_3576786_+	Putative salt-induced outer membrane protein	NA	NA	NA	NA	NA
VEG88719.1|3577049_3577397_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
VEG88720.1|3577477_3578218_-|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
VEG88721.1|3578256_3578805_-	16S rRNA-processing protein RimM	NA	NA	NA	NA	NA
VEG88722.1|3578826_3579075_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
VEG88723.1|3579302_3580664_-	signal recognition particle protein	NA	NA	NA	NA	NA
VEG88724.1|3580829_3581621_+	ccsa-related protein	NA	NA	NA	NA	NA
VEG88725.1|3581689_3582973_+	hemolysins and related proteins containing CBS domains	NA	NA	NA	NA	NA
VEG88726.1|3583061_3583577_-	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
VEG88727.1|3583744_3585343_-	glutamate--cysteine ligase	NA	NA	NA	NA	NA
VEG88728.1|3585386_3585815_-	membrane protein	NA	NA	NA	NA	NA
VEG88729.1|3585811_3586378_-	fructose-1-P/6-phosphogluconate phosphatase	NA	NA	NA	NA	NA
VEG88730.1|3587521_3587707_-	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	66.7	3.8e-12
VEG88731.1|3587956_3590584_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	36.5	7.9e-79
VEG88732.1|3590723_3590987_-	recombination regulator RecX	NA	NA	NA	NA	NA
VEG88733.1|3590991_3592200_-|transposase	transposase for the IS285 insertion element	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
3591737:3591752	attR	TGGCGGTTTTGCCATT	NA	NA	NA	NA
>prophage 6
LR134373	Yersinia pseudotuberculosis strain NCTC10275 genome assembly, chromosome: 1	4610200	4426768	4473895	4610200	tRNA,bacteriocin,transposase,protease	Bacillus_phage(50.0%)	41	NA	NA
VEG89430.1|4426768_4427872_+|tRNA	tRNA (uracil-5-)-methyltransferase	tRNA	NA	NA	NA	NA
VEG89431.1|4428005_4428413_-	putative inner membrane protein	NA	NA	NA	NA	NA
VEG89432.1|4428425_4429061_-	DNA-binding transcriptional repressor FabR	NA	NA	NA	NA	NA
VEG89433.1|4429278_4430679_+	soluble pyridine nucleotide transhydrogenase	NA	NA	NA	NA	NA
VEG89434.1|4430661_4431579_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA	NA
VEG89435.1|4431725_4432457_+	putative peroxiredoxin/glutaredoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	58.5	1.3e-47
VEG89436.1|4432550_4434014_+	dihydrolipoamide dehydrogenase	NA	NA	NA	NA	NA
VEG89437.1|4434129_4434933_-	TonB domain-containing protein	NA	NA	NA	NA	NA
VEG89438.1|4434997_4436326_-	HlyD family secretion protein	NA	NA	NA	NA	NA
VEG89439.1|4436401_4438210_-	ABC transporter	NA	W8CYL7	Bacillus_phage	31.2	3.5e-25
VEG89440.1|4438375_4438993_-	hemophore HasA	NA	NA	NA	NA	NA
VEG89441.1|4439220_4441713_-	putative TonB dependent receptor protein	NA	NA	NA	NA	NA
VEG89442.1|4442311_4443685_-	argininosuccinate lyase	NA	NA	NA	NA	NA
VEG89443.1|4443851_4444625_-	acetylglutamate kinase	NA	NA	NA	NA	NA
VEG89444.1|4444807_4445812_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
VEG89445.1|4446062_4446683_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
VEG89446.1|4446696_4447227_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
VEG89447.1|4447600_4450237_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
VEG89448.1|4450794_4451016_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG89449.1|4450954_4451740_-|transposase	transposase for insertion sequence IS1661	transposase	A0A1B1P773	Bacillus_phage	45.3	2.4e-55
VEG89450.1|4451793_4452309_-|transposase	transposase	transposase	NA	NA	NA	NA
VEG89451.1|4452518_4453403_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
VEG89452.1|4453635_4456071_-	bifunctional aspartate kinase II/homoserine dehydrogenase II	NA	NA	NA	NA	NA
VEG89453.1|4456073_4457234_-	cystathionine gamma-synthase	NA	NA	NA	NA	NA
VEG89454.1|4457611_4457929_+	transcriptional repressor protein MetJ	NA	NA	NA	NA	NA
VEG89455.1|4458277_4458733_+	YiaAB two helix domain-containing protein	NA	NA	NA	NA	NA
VEG89456.1|4459303_4459762_-|transposase	transposase for IS1541	transposase	I4AZI8	Saccharomonospora_phage	30.7	2.1e-11
VEG89457.1|4459950_4460166_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEG89458.1|4460418_4462617_+	primosome assembly protein PriA	NA	NA	NA	NA	NA
VEG89459.1|4462703_4462847_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG89460.1|4462969_4463743_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
VEG89461.1|4463733_4463997_+	transcriptional repressor	NA	NA	NA	NA	NA
VEG89462.1|4464161_4464908_+	cell division protein FtsN	NA	NA	NA	NA	NA
VEG89463.1|4465007_4465532_+|protease	ATP-dependent protease peptidase subunit	protease	NA	NA	NA	NA
VEG89464.1|4465602_4466934_+|protease	ATP-dependent protease ATP-binding subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.8	1.2e-43
VEG89465.1|4467156_4468086_+	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA	NA
VEG89466.1|4468227_4468713_+	ribonuclease activity regulator protein RraA	NA	NA	NA	NA	NA
VEG89467.1|4468829_4469414_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG89468.1|4470043_4470283_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG89469.1|4470495_4471788_+	putative secretion permease	NA	NA	NA	NA	NA
VEG89470.1|4471780_4473895_+|bacteriocin	bacteriocin ABC transporter ATP-binding protein/permease	bacteriocin	W8CYL7	Bacillus_phage	26.5	2.8e-34
