assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	4	147581-147728	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Orphan	CCCGGCGCCCCGCCGGCGCGGACGGG	26	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|69aa|up_4|LR134363.1_143220_143427_+,NA|179aa|down_8|LR134363.1_154445_154982_+	NA|734aa|up_9|LR134363.1_136626_138828_+	pfam02687, FtsX, FtsX-like permease family	NA|375aa|up_8|LR134363.1_139198_140323_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|136aa|up_7|LR134363.1_140605_141013_-	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|310aa|up_6|LR134363.1_141249_142179_-	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|205aa|up_5|LR134363.1_142450_143065_+	PRK14960, PRK14960, DNA polymerase III subunit gamma/tau	NA|69aa|up_4|LR134363.1_143220_143427_+	NA	NA|646aa|up_3|LR134363.1_143449_145387_+	cd16917, HATPase_UhpB-NarQ-NarX-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli UhpB, NarQ and NarX, and Bacillus subtilis YdfH, YhcY and YfiJ	NA|241aa|up_2|LR134363.1_145368_146091_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|202aa|up_1|LR134363.1_146161_146767_-	pfam01195, Pept_tRNA_hydro, Peptidyl-tRNA hydrolase	NA|198aa|up_0|LR134363.1_146788_147382_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|286aa|down_0|LR134363.1_147729_148587_-	PRK02412, aroD, type I 3-dehydroquinate dehydratase	NA|328aa|down_1|LR134363.1_148632_149616_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|166aa|down_2|LR134363.1_149724_150222_-	COG1507, COG1507, Uncharacterized conserved protein [Function unknown]	NA|212aa|down_3|LR134363.1_150218_150854_-	pfam04977, DivIC, Septum formation initiator	NA|155aa|down_4|LR134363.1_151116_151581_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|53aa|down_5|LR134363.1_151843_152002_+	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|435aa|down_6|LR134363.1_152255_153560_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|down_7|LR134363.1_153556_154216_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|179aa|down_8|LR134363.1_154445_154982_+	NA	NA|401aa|down_9|LR134363.1_154981_156184_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	5	181558-181645	5	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Unclear	CCCCTCCAGGTCGGGGATGACCGCCC	26	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|556aa|up_7|LR134363.1_171169_172837_-,NA|33aa|up_2|LR134363.1_179096_179195_+,NA|365aa|up_1|LR134363.1_179191_180286_+,NA|411aa|up_0|LR134363.1_180273_181506_-,NA|266aa|down_2|LR134363.1_184905_185703_+,NA|221aa|down_4|LR134363.1_186919_187582_+	NA|1687aa|up_9|LR134363.1_161992_167053_-	pfam02389, Cornifin, Cornifin (SPRR) family	cas3|1234aa|up_8|LR134363.1_167310_171012_-	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|556aa|up_7|LR134363.1_171169_172837_-	NA	NA|599aa|up_6|LR134363.1_173350_175147_-	pfam17961, Big_8, Bacterial Ig domain	NA|328aa|up_5|LR134363.1_175391_176375_-	PRK03092, PRK03092, ribose-phosphate diphosphokinase	NA|334aa|up_4|LR134363.1_176442_177444_-	PRK14352, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|418aa|up_3|LR134363.1_177751_179005_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|33aa|up_2|LR134363.1_179096_179195_+	NA	NA|365aa|up_1|LR134363.1_179191_180286_+	NA	NA|411aa|up_0|LR134363.1_180273_181506_-	NA	NA|615aa|down_0|LR134363.1_181944_183789_-	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|249aa|down_1|LR134363.1_184016_184763_+	pfam02956, TT_ORF1, TT viral orf 1	NA|266aa|down_2|LR134363.1_184905_185703_+	NA	NA|284aa|down_3|LR134363.1_185960_186812_+	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076)	NA|221aa|down_4|LR134363.1_186919_187582_+	NA	NA|429aa|down_5|LR134363.1_187664_188951_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|210aa|down_6|LR134363.1_189041_189671_-	pfam04854, DUF624, Protein of unknown function, DUF624	NA|309aa|down_7|LR134363.1_189754_190681_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|282aa|down_8|LR134363.1_190677_191523_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|444aa|down_9|LR134363.1_191621_192953_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	6	243063-243147	6	CRISPRCasFinder	no	csa3	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Type I-A	GGCGATGCCCCATGACGCCCCGCCCGGC	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|400aa|up_9|LR134363.1_231784_232984_-,NA|170aa|up_5|LR134363.1_237915_238425_-,NA|114aa|down_9|LR134363.1_256627_256969_+	NA|400aa|up_9|LR134363.1_231784_232984_-	NA	NA|559aa|up_8|LR134363.1_233441_235118_+	pfam02435, Glyco_hydro_68, Levansucrase/Invertase	NA|559aa|up_7|LR134363.1_235204_236881_-	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2)	NA|260aa|up_6|LR134363.1_237047_237827_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|170aa|up_5|LR134363.1_237915_238425_-	NA	NA|234aa|up_4|LR134363.1_238421_239123_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|285aa|up_3|LR134363.1_239424_240279_-	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|312aa|up_2|LR134363.1_240300_241236_-	PRK15065, PRK15065, mannose/fructose/sorbose family PTS transporter subunit IIC	NA|164aa|up_1|LR134363.1_241418_241910_-	pfam03830, PTSIIB_sorb, PTS system sorbose subfamily IIB component	NA|146aa|up_0|LR134363.1_241909_242347_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|794aa|down_0|LR134363.1_243244_245626_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|96aa|down_1|LR134363.1_245706_245994_-	pfam04024, PspC, PspC domain	NA|835aa|down_2|LR134363.1_246392_248897_+	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2)	NA|336aa|down_3|LR134363.1_248984_249992_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|249aa|down_4|LR134363.1_250093_250840_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|234aa|down_5|LR134363.1_250922_251624_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|618aa|down_6|LR134363.1_251840_253694_+	pfam00135, COesterase, Carboxylesterase family	NA|365aa|down_7|LR134363.1_254172_255267_+	cd03112, CobW-like, cobalamin synthesis protein CobW	NA|426aa|down_8|LR134363.1_255336_256614_+	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|114aa|down_9|LR134363.1_256627_256969_+	NA
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	10	492582-492724	1	PILER-CR	no		cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Orphan	CTCCCCCACCCACGGACCTGGAC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|724aa|up_4|LR134363.1_484526_486698_+,NA|154aa|down_1|LR134363.1_494429_494891_+,NA|242aa|down_2|LR134363.1_495019_495745_+,NA|86aa|down_5|LR134363.1_497510_497768_-,NA|339aa|down_9|LR134363.1_501783_502800_+	NA|132aa|up_9|LR134363.1_479630_480026_-	PRK13890, PRK13890, conjugal transfer protein TrbA; Provisional	NA|311aa|up_8|LR134363.1_480337_481270_+	cd08411, PBP2_OxyR, The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily	NA|323aa|up_7|LR134363.1_481300_482269_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|324aa|up_6|LR134363.1_482438_483410_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|312aa|up_5|LR134363.1_483535_484471_+	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|724aa|up_4|LR134363.1_484526_486698_+	NA	NA|293aa|up_3|LR134363.1_486736_487615_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|616aa|up_2|LR134363.1_488095_489943_-	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|470aa|up_1|LR134363.1_489953_491363_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|231aa|up_0|LR134363.1_491573_492266_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|215aa|down_0|LR134363.1_492856_493501_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|154aa|down_1|LR134363.1_494429_494891_+	NA	NA|242aa|down_2|LR134363.1_495019_495745_+	NA	NA|61aa|down_3|LR134363.1_495851_496034_-	TIGR00632, HpaII_very_short_patch_repair_endonuclease, DNA mismatch endonuclease Vsr	NA|277aa|down_4|LR134363.1_496674_497505_-	COG1106, COG1106, Predicted ATPases [General function prediction only]	NA|86aa|down_5|LR134363.1_497510_497768_-	NA	NA|562aa|down_6|LR134363.1_498129_499815_-	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]	NA|314aa|down_7|LR134363.1_499811_500753_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|219aa|down_8|LR134363.1_500749_501406_-	pfam17933, TetR_C_25, Tetracyclin repressor-like, C-terminal domain	NA|339aa|down_9|LR134363.1_501783_502800_+	NA
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	11	898673-898757	10	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Orphan	CCCGCGGCCCGGCCGGGCGGGGCGCG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|294aa|up_3|LR134363.1_894921_895803_-,NA|194aa|up_1|LR134363.1_897123_897705_+,NA	NA|239aa|up_9|LR134363.1_888016_888733_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|325aa|up_8|LR134363.1_888755_889730_-	cd12166, 2-Hacid_dh_7, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|306aa|up_7|LR134363.1_889776_890694_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|108aa|up_6|LR134363.1_890870_891194_-	COG1687, AzlD, Predicted branched-chain amino acid permeases (azaleucine resistance) [Amino acid transport and metabolism]	NA|260aa|up_5|LR134363.1_891187_891967_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|963aa|up_4|LR134363.1_891996_894885_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|294aa|up_3|LR134363.1_894921_895803_-	NA	NA|317aa|up_2|LR134363.1_895995_896946_+	pfam02661, Fic, Fic/DOC family	NA|194aa|up_1|LR134363.1_897123_897705_+	NA	NA|294aa|up_0|LR134363.1_897712_898594_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|352aa|down_0|LR134363.1_898977_900033_+	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|419aa|down_1|LR134363.1_900036_901293_+	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|388aa|down_2|LR134363.1_901289_902453_+	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|174aa|down_3|LR134363.1_902555_903077_+	pfam03703, bPH_2, Bacterial PH domain	NA|177aa|down_4|LR134363.1_903160_903691_-	TIGR00777, AhpD_protein	NA|194aa|down_5|LR134363.1_903730_904312_-	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides	NA|556aa|down_6|LR134363.1_904515_906183_+	PRK14968, PRK14968, putative methyltransferase; Provisional	NA|315aa|down_7|LR134363.1_906447_907392_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|568aa|down_8|LR134363.1_907556_909260_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|253aa|down_9|LR134363.1_909297_910056_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	12	971926-972040	11	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Orphan	CGCCGTCGTCCTGGACCCCGCCCGCACCGCG	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA,NA|72aa|down_1|LR134363.1_973631_973847_+,NA|350aa|down_2|LR134363.1_973909_974959_+,NA|443aa|down_3|LR134363.1_975000_976329_+,NA|146aa|down_4|LR134363.1_976478_976916_+,NA|172aa|down_5|LR134363.1_976915_977431_+,NA|1020aa|down_7|LR134363.1_979551_982611_+,NA|247aa|down_9|LR134363.1_983868_984609_-	NA|187aa|up_9|LR134363.1_954970_955531_-	pfam13707, RloB, RloB-like protein	NA|436aa|up_8|LR134363.1_955607_956915_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|834aa|up_7|LR134363.1_957151_959653_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|447aa|up_6|LR134363.1_959831_961172_-	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|173aa|up_5|LR134363.1_961581_962100_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|449aa|up_4|LR134363.1_962784_964131_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|840aa|up_3|LR134363.1_964390_966910_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|98aa|up_2|LR134363.1_967220_967514_-	pfam14019, DUF4235, Protein of unknown function (DUF4235)	NA|376aa|up_1|LR134363.1_967894_969022_+	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily	NA|599aa|up_0|LR134363.1_969171_970968_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|349aa|down_0|LR134363.1_972585_973632_+	cd03408, SPFH_like_u1, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|72aa|down_1|LR134363.1_973631_973847_+	NA	NA|350aa|down_2|LR134363.1_973909_974959_+	NA	NA|443aa|down_3|LR134363.1_975000_976329_+	NA	NA|146aa|down_4|LR134363.1_976478_976916_+	NA	NA|172aa|down_5|LR134363.1_976915_977431_+	NA	NA|598aa|down_6|LR134363.1_977696_979490_+	PRK14083, PRK14083, HSP90 family protein; Provisional	NA|1020aa|down_7|LR134363.1_979551_982611_+	NA	NA|288aa|down_8|LR134363.1_982795_983659_+	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|247aa|down_9|LR134363.1_983868_984609_-	NA
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	13	1199408-1200011	2,12,1	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm3gr7,cas6	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Type III-B,Type III-D,Type III-C,Type III-A	GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC,GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC,GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC	37,37,37	0	0	NA	NA	NA:NA:NA	8,8,8	8	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA,cas10|620aa|down_2|LR134363.1_1202690_1204550_+,NA|194aa|down_5|LR134363.1_1208051_1208633_+,NA|958aa|down_7|LR134363.1_1210054_1212928_+,cas6|268aa|down_9|LR134363.1_1214635_1215439_-	NA|452aa|up_9|LR134363.1_1187296_1188652_-	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase	NA|485aa|up_8|LR134363.1_1189392_1190847_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|167aa|up_7|LR134363.1_1190983_1191484_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|466aa|up_6|LR134363.1_1191753_1193151_+	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|411aa|up_5|LR134363.1_1193162_1194395_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|185aa|up_4|LR134363.1_1194589_1195144_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|463aa|up_3|LR134363.1_1195229_1196618_+	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|290aa|up_2|LR134363.1_1196990_1197860_+	pfam14683, CBM-like, Polysaccharide lyase family 4, domain III	NA|295aa|up_1|LR134363.1_1197813_1198698_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|95aa|up_0|LR134363.1_1198694_1198979_-	pfam01527, HTH_Tnp_1, Transposase	NA|127aa|down_0|LR134363.1_1200353_1200734_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|151aa|down_1|LR134363.1_1200862_1201315_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	cas10|620aa|down_2|LR134363.1_1202690_1204550_+	NA	csm3gr7|632aa|down_3|LR134363.1_1204546_1206442_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	csm3gr7|539aa|down_4|LR134363.1_1206438_1208055_+	pfam03787, RAMPs, RAMP superfamily	NA|194aa|down_5|LR134363.1_1208051_1208633_+	NA	csm3gr7|484aa|down_6|LR134363.1_1208634_1210086_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|958aa|down_7|LR134363.1_1210054_1212928_+	NA	NA|591aa|down_8|LR134363.1_1212924_1214697_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	cas6|268aa|down_9|LR134363.1_1214635_1215439_-	NA
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	14	1201943-1202402	3,13,2	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm3gr7,cas6	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Type III-B,Type III-D,Type III-C,Type III-A	GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGA,GTCAGAAGGCACCACGCGCCATAAGGTGCATT,GTCAGAAGGCACCACGCGCCATAAGGTGCATT	36,32,32	0	0	NA	NA	NA:NA:NA	6,6,6	6	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA,cas10|620aa|down_0|LR134363.1_1202690_1204550_+,NA|194aa|down_3|LR134363.1_1208051_1208633_+,NA|958aa|down_5|LR134363.1_1210054_1212928_+,cas6|268aa|down_7|LR134363.1_1214635_1215439_-	NA|167aa|up_9|LR134363.1_1190983_1191484_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|466aa|up_8|LR134363.1_1191753_1193151_+	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|411aa|up_7|LR134363.1_1193162_1194395_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|185aa|up_6|LR134363.1_1194589_1195144_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|463aa|up_5|LR134363.1_1195229_1196618_+	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|290aa|up_4|LR134363.1_1196990_1197860_+	pfam14683, CBM-like, Polysaccharide lyase family 4, domain III	NA|295aa|up_3|LR134363.1_1197813_1198698_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|95aa|up_2|LR134363.1_1198694_1198979_-	pfam01527, HTH_Tnp_1, Transposase	NA|127aa|up_1|LR134363.1_1200353_1200734_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|151aa|up_0|LR134363.1_1200862_1201315_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	cas10|620aa|down_0|LR134363.1_1202690_1204550_+	NA	csm3gr7|632aa|down_1|LR134363.1_1204546_1206442_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	csm3gr7|539aa|down_2|LR134363.1_1206438_1208055_+	pfam03787, RAMPs, RAMP superfamily	NA|194aa|down_3|LR134363.1_1208051_1208633_+	NA	csm3gr7|484aa|down_4|LR134363.1_1208634_1210086_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|958aa|down_5|LR134363.1_1210054_1212928_+	NA	NA|591aa|down_6|LR134363.1_1212924_1214697_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	cas6|268aa|down_7|LR134363.1_1214635_1215439_-	NA	NA|719aa|down_8|LR134363.1_1215996_1218153_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|191aa|down_9|LR134363.1_1218149_1218722_+	PRK09347, folE, GTP cyclohydrolase I; Provisional
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	15	1634338-1638642	3,4,14	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Type I-E	GGATCATCCCCGCGTGCGCGGGGTTTAC,GGATCATCCCCGCGTGCGCGGGGTTTAC,GGATCATCCCCGCGTGCGCGGGGTTTAC	28,28,28	0	0	NA	NA	NA:NA:NA	70,69,69	70	TypeI-E	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|269aa|up_3|LR134363.1_1630305_1631112_-,NA|233aa|down_1|LR134363.1_1641305_1642004_+	NA|657aa|up_9|LR134363.1_1620384_1622355_-	TIGR02456, Trehalose_synthase, trehalose synthase	NA|693aa|up_8|LR134363.1_1622351_1624430_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|381aa|up_7|LR134363.1_1624631_1625774_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|777aa|up_6|LR134363.1_1625820_1628151_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|257aa|up_5|LR134363.1_1628341_1629112_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|330aa|up_4|LR134363.1_1629148_1630138_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|269aa|up_3|LR134363.1_1630305_1631112_-	NA	NA|250aa|up_2|LR134363.1_1631111_1631861_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|132aa|up_1|LR134363.1_1631857_1632253_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|370aa|up_0|LR134363.1_1632573_1633683_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|355aa|down_0|LR134363.1_1638649_1639714_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|233aa|down_1|LR134363.1_1641305_1642004_+	NA	cas2|131aa|down_2|LR134363.1_1643572_1643965_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|298aa|down_3|LR134363.1_1643958_1644852_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|230aa|down_4|LR134363.1_1644907_1645597_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|241aa|down_5|LR134363.1_1645599_1646322_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|377aa|down_6|LR134363.1_1646321_1647452_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|236aa|down_7|LR134363.1_1647454_1648162_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|555aa|down_8|LR134363.1_1648158_1649823_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|986aa|down_9|LR134363.1_1649819_1652777_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	16	1639828-1643516	15,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Type I-E	GGATCATCCCCGCGTGCGCGGGGTTTAC,GGATCATCCCCGCGTGCGCGGGGTTTAC,GGATCATCCCCGCGTGCGCGGGGTTTAC	28,28,28	0	0	NA	NA	NA:NA:NA	60,60,52	60	TypeI-E	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA|269aa|up_5|LR134363.1_1630305_1631112_-,NA|240aa|up_1|LR134363.1_1635573_1636293_+,NA	NA|381aa|up_9|LR134363.1_1624631_1625774_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|777aa|up_8|LR134363.1_1625820_1628151_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|257aa|up_7|LR134363.1_1628341_1629112_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|330aa|up_6|LR134363.1_1629148_1630138_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|269aa|up_5|LR134363.1_1630305_1631112_-	NA	NA|250aa|up_4|LR134363.1_1631111_1631861_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|132aa|up_3|LR134363.1_1631857_1632253_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|370aa|up_2|LR134363.1_1632573_1633683_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|240aa|up_1|LR134363.1_1635573_1636293_+	NA	NA|355aa|up_0|LR134363.1_1638649_1639714_-	pfam13358, DDE_3, DDE superfamily endonuclease	cas2|131aa|down_0|LR134363.1_1643572_1643965_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|298aa|down_1|LR134363.1_1643958_1644852_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|230aa|down_2|LR134363.1_1644907_1645597_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|241aa|down_3|LR134363.1_1645599_1646322_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|377aa|down_4|LR134363.1_1646321_1647452_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|236aa|down_5|LR134363.1_1647454_1648162_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|555aa|down_6|LR134363.1_1648158_1649823_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|986aa|down_7|LR134363.1_1649819_1652777_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|405aa|down_8|LR134363.1_1652984_1654199_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|369aa|down_9|LR134363.1_1654296_1655403_+	COG2816, NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding [DNA replication, recombination, and repair]
GCA_900637295.1_50477_G01	LR134363	Actinomyces slackii strain NCTC11923 genome assembly, chromosome: 1	17	2802942-2803558	16,5,6	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	Orphan	GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC,GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC,TCAGAAGGCACCACGCGCCATAAGGTGCATTGAGA	37,37,35	0	0	NA	NA	NA:NA:NA	8,8,7	8	Orphan	cas3,csa3,DEDDh,cas10,csm3gr7,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,cas4,WYL,RT	NA,NA	NA|309aa|up_9|LR134363.1_2786849_2787776_+	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter	NA|463aa|up_8|LR134363.1_2787772_2789161_+	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]	NA|146aa|up_7|LR134363.1_2789233_2789671_-	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate	NA|243aa|up_6|LR134363.1_2789868_2790597_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|701aa|up_5|LR134363.1_2790673_2792776_-	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|560aa|up_4|LR134363.1_2792969_2794649_-	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|602aa|up_3|LR134363.1_2794846_2796652_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|1102aa|up_2|LR134363.1_2796648_2799954_-	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|255aa|up_1|LR134363.1_2800395_2801160_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|265aa|up_0|LR134363.1_2801333_2802128_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|274aa|down_0|LR134363.1_2803829_2804651_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|787aa|down_1|LR134363.1_2804897_2807258_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|211aa|down_2|LR134363.1_2807250_2807883_-	pfam09819, ABC_cobalt, ABC-type cobalt transport system, permease component	NA|574aa|down_3|LR134363.1_2808421_2810143_+	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]	NA|249aa|down_4|LR134363.1_2810139_2810886_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|339aa|down_5|LR134363.1_2810882_2811899_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|452aa|down_6|LR134363.1_2811898_2813254_+	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional	NA|350aa|down_7|LR134363.1_2813307_2814357_+	COG0730, COG0730, Predicted permeases [General function prediction only]	NA|499aa|down_8|LR134363.1_2814513_2816010_-	pfam03136, Pup_ligase, Pup-ligase protein	NA|63aa|down_9|LR134363.1_2816018_2816207_-	TIGR03687, pupylate_cterm, ubiquitin-like protein Pup
