The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	604735	661603	2650496	holin,protease,transposase	Bacillus_phage(30.0%)	46	NA	NA
VEG63472.1|604735_605845_+|transposase	putative transposase	transposase	W5R8S3	Staphylococcus_phage	67.8	3.0e-144
VEG63473.1|606006_606714_+	putative NAD(P)H-flavin oxidoreductase	NA	NA	NA	NA	NA
VEG63474.1|606905_607898_+	D-specific D-2-hydroxyacid dehydrogenase	NA	Q89388	Paramecium_bursaria_Chlorella_virus	30.8	7.9e-40
VEG63475.1|607949_609746_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	29.7	4.6e-46
VEG63476.1|609729_611517_+	putative ABC transporter ATP-binding/permease	NA	W8CYL7	Bacillus_phage	27.7	2.1e-46
VEG63477.1|611571_611853_-	acetyltransferase	NA	NA	NA	NA	NA
VEG63478.1|612144_613170_+	zinc ABC transporter periplasmic-binding protein ZnuA	NA	NA	NA	NA	NA
VEG63479.1|613330_613765_+	putative transcription regulator MarR family	NA	NA	NA	NA	NA
VEG63480.1|613832_614726_+	putative glyoxylase family protein	NA	NA	NA	NA	NA
VEG63481.1|615150_616584_+	melibiose:sodium symporter	NA	NA	NA	NA	NA
VEG63482.1|616599_617445_-	lactose operon transcription regulator	NA	NA	NA	NA	NA
VEG63483.1|617536_620545_+	beta-D-galactosidase	NA	L0N6M2	Herpes_simplex_virus	31.0	3.6e-128
VEG63484.1|620604_622557_-	putative fructose-bisphosphatase	NA	NA	NA	NA	NA
VEG63485.1|622785_623634_+	putative ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.0	1.4e-13
VEG63486.1|623630_624290_+	membrane protein	NA	NA	NA	NA	NA
VEG63487.1|624345_624966_-	putative alkaline phosphatase	NA	NA	NA	NA	NA
VEG63488.1|625491_626766_+	putative glucarate transporter	NA	NA	NA	NA	NA
VEG63489.1|626913_627216_+	monooxygenase family protein	NA	NA	NA	NA	NA
VEG63490.1|627338_628037_+	putative alpha-acetolactate decarboxylase	NA	NA	NA	NA	NA
VEG63491.1|628184_630086_+	Integral membrane protein	NA	NA	NA	NA	NA
VEG63492.1|630170_630584_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEG63493.1|630809_632009_-	putative GTPases (G3E family) protein	NA	NA	NA	NA	NA
VEG63494.1|632287_632986_+	GTP pyrophosphokinase ywaC	NA	NA	NA	NA	NA
VEG63495.1|633702_635811_+	putative ATP-dependent Clp proteinase chain clpL	NA	H6X3M6	Enterobacteria_phage	37.9	3.2e-115
VEG63496.1|635987_636596_+	membrane protein	NA	NA	NA	NA	NA
VEG63497.1|636713_637316_-	transcriptional regulator	NA	NA	NA	NA	NA
VEG63498.1|637446_638127_+	putative gluconate operon transcriptional repressor	NA	NA	NA	NA	NA
VEG63499.1|638153_639689_+	putative gluconokinase	NA	NA	NA	NA	NA
VEG63500.1|639814_641176_+	putative gluconate permease	NA	NA	NA	NA	NA
VEG63501.1|641249_642071_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG63502.1|642138_643371_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
VEG63503.1|643492_645667_-	polyphosphate kinase	NA	NA	NA	NA	NA
VEG63504.1|645880_647479_-	putative exopolyphosphatase	NA	NA	NA	NA	NA
VEG63505.1|647751_648216_+	lipoprotein	NA	NA	NA	NA	NA
VEG63506.1|648412_649198_+	protein of pXO2-46	NA	NA	NA	NA	NA
VEG63507.1|649339_650080_+|protease	metal-dependent membrane protease	protease	NA	NA	NA	NA
VEG63508.1|650212_650884_+	putative ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	35.9	1.4e-19
VEG63509.1|650880_651654_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
VEG63510.1|651836_653030_+	putative transport protein	NA	NA	NA	NA	NA
VEG63511.1|653072_654437_-	putative para-nitrobenzyl esterase chain A	NA	A0A0G2Y6W1	Acanthamoeba_polyphaga_mimivirus	31.7	7.1e-23
VEG63512.1|654542_656201_-	putative amino acid transporter	NA	NA	NA	NA	NA
VEG63513.1|656708_657305_+	molecular chaperone GroEL	NA	NA	NA	NA	NA
VEG63514.1|658075_659326_+|holin	putative glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA	holin	Q6GZ03	Mycoplasma_phage	53.8	1.6e-21
VEG63515.1|659325_659961_+|holin	putative glycine betaine/carnitine/choline transport system permease	holin	NA	NA	NA	NA
VEG63516.1|659978_660920_+|holin	putative glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC	holin	NA	NA	NA	NA
VEG63517.1|660919_661603_+|holin	putative glycine betaine/carnitine/choline transport system permease	holin	NA	NA	NA	NA
>prophage 2
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	1177484	1209006	2650496	tRNA	Staphylococcus_phage(92.59%)	33	NA	NA
VEG64030.1|1177484_1178873_+	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	59.9	8.5e-165
VEG64031.1|1178876_1179884_+	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	51.9	1.3e-93
VEG64032.1|1179880_1180138_-	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	70.6	7.3e-30
VEG64033.1|1180227_1180701_+	low G+C gram positive nudix hydrolase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	46.4	5.3e-34
VEG64034.1|1180684_1181461_+	peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	65.3	3.3e-94
VEG64035.1|1181511_1183104_-	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	79.0	2.7e-255
VEG64036.1|1183491_1184688_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	82.1	1.2e-188
VEG64037.1|1184785_1185685_+	Predicted HD superfamily hydrolase	NA	A0A2H4PQQ8	Staphylococcus_phage	74.8	4.0e-99
VEG64038.1|1185813_1186656_+	aldo keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.6	2.5e-111
VEG64039.1|1186666_1187362_+	ADP-ribosyl-[dinitrogen reductase] glycohydrolase	NA	A0A1J0FA18	Only_Syngen_Nebraska_virus	30.7	8.9e-14
VEG64040.1|1187634_1187991_-	CrcB-like protein	NA	NA	NA	NA	NA
VEG64041.1|1187983_1188355_-	camphor resistance protein CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	67.8	7.3e-39
VEG64042.1|1188424_1188730_-	membrane protein	NA	NA	NA	NA	NA
VEG64043.1|1188914_1189631_+	putative translaldolase	NA	M1PR54	Cyanophage	35.1	2.9e-20
VEG64044.1|1189758_1190211_+	putative staphylococcal protein	NA	A0A2H4PQT8	Staphylococcus_phage	42.9	6.2e-16
VEG64045.1|1190194_1190638_-	comK family protein	NA	NA	NA	NA	NA
VEG64046.1|1190630_1191131_-	RNA polymerase sigma factor sigS	NA	A0A2H4PQT5	Staphylococcus_phage	48.0	1.4e-24
VEG64047.1|1191333_1191555_+	putative staphylococcal protein	NA	NA	NA	NA	NA
VEG64048.1|1191873_1192719_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQU5	Staphylococcus_phage	43.3	1.8e-40
VEG64049.1|1192846_1194328_+	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	64.5	6.5e-14
VEG64050.1|1194733_1195783_+	diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	58.3	2.0e-118
VEG64051.1|1195789_1196422_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	63.3	1.3e-72
VEG64052.1|1196437_1197619_+	riboflavin biosynthesis protein	NA	A0A2H4PQS2	Staphylococcus_phage	71.8	8.2e-169
VEG64053.1|1197650_1198109_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	78.3	4.3e-57
VEG64054.1|1198173_1199172_-	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	64.2	1.3e-114
VEG64055.1|1199427_1200258_+	putative lysophospholipase	NA	NA	NA	NA	NA
VEG64056.1|1200450_1201407_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
VEG64057.1|1201471_1202029_-	rRNA methylase	NA	A0A2H4PQV0	Staphylococcus_phage	59.5	3.6e-58
VEG64058.1|1202033_1202990_-	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	85.9	4.3e-67
VEG64059.1|1203258_1204437_+	major facilitator superfamily permease	NA	A0A2H4PQR6	Staphylococcus_phage	76.0	8.2e-169
VEG64060.1|1204925_1207340_+|tRNA	leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	85.8	0.0e+00
VEG64061.1|1207360_1207678_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.5	1.3e-33
VEG64062.1|1207734_1209006_-	flavoprotein	NA	A0A2H4PQX1	Staphylococcus_phage	73.5	1.9e-38
>prophage 3
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	1322104	1331245	2650496	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
VEG64164.1|1322104_1323121_+	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	8.5e-05
VEG64165.1|1323110_1324136_+|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
VEG64166.1|1324151_1325294_+|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	3.4e-87
VEG64167.1|1325307_1325568_+	preprotein translocase, YajC subunit	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	41.0	6.3e-05
VEG64168.1|1326019_1328296_+	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	36.1	2.0e-30
VEG64169.1|1328430_1330707_+	putative single-strand DNA-specific exonuclease	NA	A7KV88	Bacillus_phage	31.2	1.9e-76
VEG64170.1|1330726_1331245_+	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.1	6.2e-28
>prophage 4
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	1768261	1850257	2650496	integrase,tail,portal,tRNA,holin,protease,terminase	uncultured_Caudovirales_phage(41.94%)	106	1798657:1798672	1850574:1850589
VEG64582.1|1768261_1769170_-	putative aspartate transcarbamoylase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	32.9	1.4e-27
VEG64583.1|1769211_1770498_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.7	1.1e-57
VEG64584.1|1770722_1771250_-	bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
VEG64585.1|1771802_1774922_-	type I restriction-modification system endonuclease	NA	A0A220A398	Liberibacter_phage	29.6	8.8e-69
VEG64586.1|1774911_1776180_-	type I restriction-modification system specificity protein	NA	A0A1V0SLK8	Klosneuvirus	29.9	1.6e-16
VEG64587.1|1776169_1777138_-	Type I restriction-modification system,DNA-methyltransferase subunit M	NA	A0A220A2U5	Liberibacter_phage	27.7	6.1e-21
VEG64588.1|1777152_1777683_-	type I restriction-modification system DNA methylase	NA	NA	NA	NA	NA
VEG64589.1|1777890_1778808_-	putative ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	32.1	5.8e-13
VEG64590.1|1778820_1779303_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
VEG64591.1|1779409_1779898_-	secretory antigen SsaA	NA	NA	NA	NA	NA
VEG64592.1|1779906_1780701_-	glyoxalase	NA	NA	NA	NA	NA
VEG64593.1|1780914_1783662_-|tRNA	isoleucyl-tRNA synthetase	tRNA	A0A2I2L3Y0	Orpheovirus	26.6	2.8e-87
VEG64594.1|1783930_1784539_-	cell-division initiation protein	NA	NA	NA	NA	NA
VEG64595.1|1784563_1785289_-	putative RNA-binding protein	NA	NA	NA	NA	NA
VEG64596.1|1785410_1785707_-	cell division protein	NA	NA	NA	NA	NA
VEG64597.1|1785719_1786340_-	cell division-like FtsZ-interacting protein	NA	NA	NA	NA	NA
VEG64598.1|1786345_1787020_-	alanine racemase	NA	NA	NA	NA	NA
VEG64599.1|1787032_1787827_-	multi-copper polyphenol oxidoreductase laccase	NA	NA	NA	NA	NA
VEG64600.1|1788055_1789228_-	cell division protein FtsZ	NA	NA	NA	NA	NA
VEG64601.1|1789257_1790670_-	putative cell division protein FtsA	NA	NA	NA	NA	NA
VEG64602.1|1790772_1791693_-	putative cell division protein	NA	NA	NA	NA	NA
VEG64603.1|1791707_1793057_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	NA	NA	NA	NA	NA
VEG64604.1|1793060_1794026_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
VEG64605.1|1794124_1796278_-	penicillin-binding protein Pbp1	NA	NA	NA	NA	NA
VEG64606.1|1796258_1796663_-	putative cell division protein	NA	NA	NA	NA	NA
VEG64607.1|1796682_1797618_-	S-adenosyl-methyltransferase MraW	NA	NA	NA	NA	NA
VEG64608.1|1797632_1798064_-	cell division protein MraZ	NA	NA	NA	NA	NA
VEG64609.1|1798206_1799820_-	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA	NA
1798657:1798672	attL	TTTTTCAATACGTTTT	NA	NA	NA	NA
VEG64610.1|1799969_1800419_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
VEG64611.1|1800470_1801151_-	putative haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
VEG64612.1|1801356_1801539_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64613.1|1801667_1802630_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64614.1|1802678_1802816_-	phenol soluble modulin	NA	NA	NA	NA	NA
VEG64615.1|1802871_1803006_-	phenol soluble modulin	NA	NA	NA	NA	NA
VEG64616.1|1803563_1804274_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64617.1|1804821_1806285_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	U3PDY3	Staphylococcus_phage	79.1	1.1e-210
VEG64618.1|1806281_1806758_-|holin	holin, phage phi LC3 family	holin	U3PJ27	Staphylococcus_phage	79.9	1.4e-66
VEG64619.1|1806805_1807204_-	hypothetical phage membrane protein	NA	A0A2H4JCM1	uncultured_Caudovirales_phage	87.9	2.0e-58
VEG64620.1|1807190_1807613_-	hypothetical phage membrane protein	NA	A0A2H4JID2	uncultured_Caudovirales_phage	79.3	3.1e-62
VEG64621.1|1807650_1807803_-	phage protein	NA	NA	NA	NA	NA
VEG64622.1|1807822_1808194_-	Protein of uncharacterised function (DUF2977)	NA	NA	NA	NA	NA
VEG64623.1|1808193_1809672_-|tail	putative phage tail protein	tail	A8ATB2	Listeria_phage	54.0	6.7e-43
VEG64624.1|1809671_1811636_-	cell wall surface anchor family protein	NA	U5PWM6	Bacillus_phage	28.7	6.0e-39
VEG64625.1|1811632_1811863_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64626.1|1811855_1813445_-|tail	prophage endopeptidase tail family protein	tail	A0A2H4JAF8	uncultured_Caudovirales_phage	79.9	2.0e-258
VEG64627.1|1813454_1814309_-|tail	phage tail family protein	tail	A0A2H4J7E0	uncultured_Caudovirales_phage	81.0	1.6e-134
VEG64628.1|1814310_1818249_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A2H4JDT7	uncultured_Caudovirales_phage	80.3	1.5e-286
VEG64629.1|1818423_1819353_-	Uncharacterised protein	NA	A0A172JI52	Bacillus_phage	33.8	7.4e-40
VEG64630.1|1819438_1820464_-|tail	phage tail tape measure protein	tail	A0A2H4J669	uncultured_Caudovirales_phage	96.7	4.8e-157
VEG64631.1|1820492_1820645_-	Uncharacterised protein	NA	A0A2H4JAE7	uncultured_Caudovirales_phage	94.0	6.8e-20
VEG64632.1|1820677_1821040_-	phage protein	NA	A0A2H4J9U5	uncultured_Caudovirales_phage	97.5	8.1e-59
VEG64633.1|1821099_1821279_-	phi 11 orf35	NA	A0A0N9STM6	Staphylococcus_phage	50.9	4.9e-09
VEG64634.1|1821298_1821922_-|tail	phage major tail, phi13 family protein	tail	A0A2H4JH93	uncultured_Caudovirales_phage	63.3	8.7e-69
VEG64635.1|1821933_1822329_-	putative bacteriophage protein	NA	A0A2H4JBV0	uncultured_Caudovirales_phage	40.2	2.8e-20
VEG64636.1|1822349_1822739_-	bacteriophage protein	NA	A0A2H4J3L8	uncultured_Caudovirales_phage	53.8	5.3e-32
VEG64637.1|1822728_1823097_-	phage protein	NA	NA	NA	NA	NA
VEG64638.1|1823080_1823368_-	Bacteriophage	NA	A0A059T7R0	Listeria_phage	47.3	1.0e-11
VEG64639.1|1823385_1824597_-	phage protein	NA	Q4ZD74	Staphylococcus_phage	45.4	5.8e-85
VEG64640.1|1824608_1825316_-|protease	Prophage Clp protease-like protein	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	50.8	6.0e-42
VEG64641.1|1825278_1826457_-|portal	putative phage portal protein	portal	A8AT96	Listeria_phage	50.8	5.8e-106
VEG64642.1|1826472_1828143_-|terminase	putative phage terminase, large subunit	terminase	A0A059T7Q8	Listeria_phage	60.9	8.8e-201
VEG64643.1|1828139_1828502_-	phage protein	NA	A0A2H4JAH7	uncultured_Caudovirales_phage	56.2	3.9e-29
VEG64644.1|1828688_1829423_-	phage-associated homing endonuclease	NA	A0A1W6JQ75	Staphylococcus_phage	59.0	1.4e-78
VEG64645.1|1829707_1830154_-	phage transcriptional regulator	NA	A0A2H4JB30	uncultured_Caudovirales_phage	71.6	2.4e-57
VEG64646.1|1830202_1830673_-	recombination protein U	NA	H9A0M5	Staphylococcus_phage	57.8	4.6e-46
VEG64647.1|1830669_1830855_-	Uncharacterised protein	NA	Q4ZC78	Staphylococcus_virus	55.2	6.9e-06
VEG64648.1|1830851_1831025_-	transcriptional activator RinB family protein	NA	Q4ZC79	Staphylococcus_virus	75.4	5.2e-16
VEG64649.1|1831021_1831255_-	Protein of uncharacterised function (DUF1381)	NA	A0A1W6JQD0	Staphylococcus_phage	91.5	6.0e-15
VEG64650.1|1831266_1831443_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64651.1|1831457_1831664_-	Cro/CI family transcriptional regulator	NA	A0A2H4JCF9	uncultured_Caudovirales_phage	58.5	1.2e-11
VEG64652.1|1831708_1832008_-	phage DNA binding protein	NA	U3PBR4	Staphylococcus_phage	85.9	1.5e-42
VEG64653.1|1832000_1832222_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64654.1|1832222_1832465_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64655.1|1832461_1832656_-	Uncharacterised protein	NA	Q4ZC85	Staphylococcus_virus	76.2	4.2e-22
VEG64656.1|1832645_1833047_-	phage protein	NA	A0A1S5SFT9	Streptococcus_phage	33.6	1.9e-13
VEG64657.1|1833043_1833454_-	putative phage PVL protein	NA	NA	NA	NA	NA
VEG64658.1|1833440_1833644_-	Uncharacterised protein	NA	Q4ZC88	Staphylococcus_virus	62.7	5.8e-14
VEG64659.1|1833595_1834282_-	Type I restriction-modification system methyltransferase subunit	NA	B7T0H3	Staphylococcus_virus	67.3	1.5e-82
VEG64660.1|1834281_1834734_-	Nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA	NA
VEG64661.1|1834726_1835224_-	Protein of unknwon function (DUF3310)	NA	Q4Z910	Staphylococcus_phage	54.3	6.6e-11
VEG64662.1|1835224_1835746_-	PVL ORF-50-like family	NA	Q4ZC91	Staphylococcus_virus	31.8	1.3e-17
VEG64663.1|1835748_1835937_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64664.1|1835911_1836142_-	hypothetical phage-related protein	NA	A0A2H4J7L3	uncultured_Caudovirales_phage	49.3	7.2e-13
VEG64665.1|1836138_1837371_-	prophage L54a, replicative DNA helicase	NA	A0A2H4JFD2	uncultured_Caudovirales_phage	62.6	2.8e-143
VEG64666.1|1837363_1837720_-	phage protein	NA	A0A2H4J7Z2	uncultured_Caudovirales_phage	54.9	4.0e-26
VEG64667.1|1837719_1838430_-	putative phage replication protein	NA	A0A2H4JC54	uncultured_Caudovirales_phage	71.4	9.0e-70
VEG64668.1|1838416_1839100_-	phage protein	NA	Q4ZC99	Staphylococcus_virus	75.9	2.7e-100
VEG64669.1|1839111_1839543_-	single-strand DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	69.9	2.3e-52
VEG64670.1|1839542_1840223_-	ERF family protein	NA	A0A1J0MF78	Staphylococcus_phage	87.7	2.3e-107
VEG64671.1|1840223_1840709_-	siphovirus Gp157 family protein	NA	A0A1J0MFG4	Staphylococcus_phage	76.4	3.4e-60
VEG64672.1|1840708_1840918_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64673.1|1841000_1841165_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64674.1|1841161_1841392_-	Uncharacterized protein conserved in bacteria	NA	A0A2H4J5V1	uncultured_Caudovirales_phage	66.7	2.2e-22
VEG64675.1|1841451_1841658_+	Uncharacterised protein	NA	A0A2H4JCI8	uncultured_Caudovirales_phage	60.6	5.6e-17
VEG64676.1|1842064_1842265_-	Uncharacterised protein	NA	A0A2H4J2L6	uncultured_Caudovirales_phage	59.6	4.6e-08
VEG64677.1|1842276_1843044_-	putative antirepressor, phage associated	NA	I6TJS0	Staphylococcus_virus	80.9	1.5e-110
VEG64678.1|1843057_1843282_-	helix-turn-helix family protein	NA	A0A2H4JEA4	uncultured_Caudovirales_phage	98.6	1.0e-35
VEG64679.1|1843438_1843768_+	helix-turn-helix family protein	NA	A0A2H4J5G9	uncultured_Caudovirales_phage	94.5	3.0e-52
VEG64680.1|1843782_1844250_+	phage protein	NA	A0A2H4J463	uncultured_Caudovirales_phage	66.4	3.6e-51
VEG64681.1|1844352_1844595_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64682.1|1844858_1845005_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64683.1|1845001_1845622_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64684.1|1845753_1846782_+|integrase	integrase	integrase	A0A1Q1PVY8	Staphylococcus_phage	60.6	5.4e-116
VEG64685.1|1847457_1848399_-	HIRAN domain-containing protein	NA	R9QTP0	Staphylococcus_phage	59.4	1.1e-46
VEG64686.1|1848477_1848948_-	putative lipoprotein	NA	NA	NA	NA	NA
VEG64687.1|1849765_1850257_-	serine O-acetyltransferase	NA	A0A2H4J5A8	uncultured_Caudovirales_phage	27.6	6.3e-06
1850574:1850589	attR	TTTTTCAATACGTTTT	NA	NA	NA	NA
>prophage 5
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	1929861	1997285	2650496	tail,portal,capsid,transposase,holin,lysis,terminase,head	Staphylococcus_virus(47.06%)	86	NA	NA
VEG64769.1|1929861_1931340_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.2	1.6e-73
VEG64770.1|1931357_1931924_-	putative phosphoribosylglycinamide formyltransferase PurN	NA	M4QRX9	Synechococcus_phage	39.7	1.1e-30
VEG64771.1|1931920_1932958_-	phosphoribosylaminoimidazole synthetase	NA	Q58MH8	Prochlorococcus_phage	43.5	2.2e-69
VEG64772.1|1932962_1934384_-	putative amidophosphoribosyltransferase PurF	NA	A0A0M3SGR2	Mollivirus	31.0	4.3e-47
VEG64773.1|1934362_1936552_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	39.5	1.3e-138
VEG64774.1|1936544_1937216_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
VEG64775.1|1937215_1937482_-	putative phosphoribosylformylglycinamidine synthase, PurS component	NA	A0A1B1IU82	uncultured_Mediterranean_phage	35.0	2.9e-05
VEG64776.1|1937481_1938186_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	46.4	2.1e-50
VEG64777.1|1938185_1939313_-	phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
VEG64778.1|1939299_1939782_-	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	44.0	3.1e-21
VEG64779.1|1939990_1940848_+	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.8	8.4e-38
VEG64780.1|1940964_1942041_-	putative peptidase	NA	NA	NA	NA	NA
VEG64781.1|1942259_1943576_+|transposase	transposase (fragment 2)	transposase	A0A1S5SBP9	Streptococcus_phage	32.2	8.0e-48
VEG64782.1|1943651_1944800_-	putative flavohemoprotein	NA	NA	NA	NA	NA
VEG64783.1|1945185_1945503_+	putative secreted protein	NA	NA	NA	NA	NA
VEG64784.1|1945803_1946916_+	putative quinol oxidase polypeptide II QoxA	NA	NA	NA	NA	NA
VEG64785.1|1946915_1948898_+	quinol oxidase polypeptide I QoxB	NA	NA	NA	NA	NA
VEG64786.1|1948890_1949493_+	putative quinol oxidase polypeptide III	NA	NA	NA	NA	NA
VEG64787.1|1949489_1949780_+	putative quinol oxidase polypeptide IV	NA	NA	NA	NA	NA
VEG64788.1|1949916_1950825_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA	NA
VEG64789.1|1950905_1951658_+	putative lactose phosphotransferase system repressor lacR	NA	NA	NA	NA	NA
VEG64790.1|1951850_1952282_+	putative galactose-6-phosphate isomerase LacA subunit	NA	NA	NA	NA	NA
VEG64791.1|1952300_1952816_+	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
VEG64792.1|1952815_1953763_+	putative tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
VEG64793.1|1953759_1954047_+	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
VEG64794.1|1954000_1954696_+	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
VEG64795.1|1954831_1956121_+	arsenic efflux pump protein	NA	A0A2H4PQU3	Staphylococcus_phage	70.6	2.6e-168
VEG64796.1|1956136_1956538_+	arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	66.7	8.7e-46
VEG64797.1|1956579_1957986_-	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
VEG64798.1|1958119_1958923_-	putative PTS system lactose-specific component IIBC	NA	NA	NA	NA	NA
VEG64799.1|1959266_1960733_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	U3PDY3	Staphylococcus_phage	77.7	6.8e-205
VEG64800.1|1960729_1961206_-|holin	holin, phage phi LC3 family	holin	U3PJ27	Staphylococcus_phage	79.9	1.4e-66
VEG64801.1|1961253_1961652_-	hypothetical phage membrane protein	NA	A0A2H4JCM1	uncultured_Caudovirales_phage	87.1	1.5e-58
VEG64802.1|1961638_1962061_-	hypothetical phage membrane protein	NA	A0A2H4JID2	uncultured_Caudovirales_phage	77.1	3.2e-59
VEG64803.1|1962134_1962302_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64804.1|1962301_1963090_-	Uncharacterised protein	NA	A0A2H4JE36	uncultured_Caudovirales_phage	41.5	2.5e-52
VEG64805.1|1963127_1963268_-	phage protein	NA	A0A060AB44	Staphylococcus_phage	95.5	6.8e-06
VEG64806.1|1963269_1963770_-	Uncharacterised protein	NA	A0A2H4J9L3	uncultured_Caudovirales_phage	77.7	3.0e-40
VEG64807.1|1963781_1965122_-|tail	phage tail fiber protein	tail	A0A2H4J9N1	uncultured_Caudovirales_phage	77.3	5.8e-86
VEG64808.1|1965134_1967054_-	phage-related cell wall hydrolase	NA	Q4ZCC7	Staphylococcus_virus	98.9	0.0e+00
VEG64809.1|1967103_1967493_-	Uncharacterised protein	NA	Q4ZCC9	Staphylococcus_virus	100.0	6.0e-52
VEG64810.1|1967485_1967929_-	Uncharacterised protein	NA	Q4ZCD0	Staphylococcus_virus	90.5	7.0e-73
VEG64811.1|1967940_1968075_-	phage uncharacterized protein, XkdX family	NA	NA	NA	NA	NA
VEG64812.1|1968064_1968439_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64813.1|1968449_1969886_-	phage protein	NA	A0A2H4JH16	uncultured_Caudovirales_phage	43.2	2.5e-47
VEG64814.1|1969882_1971961_-	Putative major teichoic acid biosynthesis protein C	NA	A0A2H4JFY2	uncultured_Caudovirales_phage	61.1	7.0e-139
VEG64815.1|1971963_1973466_-	phage minor structural protein	NA	Q4ZCD5	Staphylococcus_virus	99.0	7.2e-279
VEG64816.1|1973474_1974389_-|tail	phage tail protein	tail	Q4ZCD7	Staphylococcus_virus	98.4	2.5e-173
VEG64817.1|1974407_1977413_-	phage tape measure protein	NA	Q4ZCD8	Staphylococcus_virus	93.5	0.0e+00
VEG64818.1|1977423_1977699_-	phage protein	NA	Q4ZCD9	Staphylococcus_virus	98.9	5.7e-41
VEG64819.1|1977764_1978262_-	phage family protein	NA	Q4ZCE0	Staphylococcus_virus	100.0	4.9e-91
VEG64820.1|1978319_1978883_-|tail	putative tail protein	tail	Q4ZCE1	Staphylococcus_virus	99.5	1.4e-97
VEG64821.1|1978886_1979309_-	phage protein	NA	Q4ZCE2	Staphylococcus_virus	97.9	1.9e-75
VEG64822.1|1979319_1979733_-	phage protein	NA	Q4ZCE4	Staphylococcus_virus	89.1	6.8e-70
VEG64823.1|1979719_1980055_-|head,tail	putative phage head-tail adaptor protein	head,tail	Q4ZCE5	Staphylococcus_virus	96.4	9.7e-59
VEG64824.1|1980056_1980353_-	putative phage DNA-packaging protein	NA	Q4ZCE6	Staphylococcus_virus	100.0	4.6e-52
VEG64825.1|1980352_1980634_-	Rho termination factor domain-containing protein	NA	Q4ZCE7	Staphylococcus_virus	100.0	1.1e-44
VEG64826.1|1980646_1981471_-|capsid	putative phage major capsid protein	capsid	Q4ZCE8	Staphylococcus_virus	100.0	6.6e-149
VEG64827.1|1981489_1982083_-	phage minor structural GP20	NA	Q4ZCE9	Staphylococcus_virus	98.5	2.7e-75
VEG64828.1|1982209_1983154_-|head	phage minor head protein	head	Q4ZCF0	Staphylococcus_virus	97.5	4.1e-171
VEG64829.1|1983125_1984487_-|portal	SPP1 family phage portal protein	portal	Q4ZCF1	Staphylococcus_virus	93.2	9.5e-254
VEG64830.1|1984537_1985794_-|terminase	phage terminase large subunit	terminase	Q4ZCF2	Staphylococcus_virus	90.4	8.9e-222
VEG64831.1|1985790_1986222_-|terminase	Phage terminase, small subunit	terminase	Q4ZCF3	Staphylococcus_virus	85.8	2.2e-63
VEG64832.1|1986310_1986580_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64833.1|1986602_1986824_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64834.1|1987070_1987475_-	RNA polymerase sigma factor, sigma-70 family	NA	A0A1J0MFD1	Staphylococcus_phage	62.4	1.9e-40
VEG64835.1|1987490_1987628_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64836.1|1987790_1988045_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64837.1|1988023_1988365_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64838.1|1988409_1988583_-	phage protein	NA	A1BUB4	Staphylococcus_virus	48.8	1.9e-05
VEG64839.1|1988627_1988927_-	phage DNA binding protein	NA	U3PBR4	Staphylococcus_phage	86.9	1.1e-42
VEG64840.1|1988919_1989141_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64841.1|1989141_1989384_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64842.1|1989380_1989575_-	Uncharacterised protein	NA	Q4ZC85	Staphylococcus_virus	76.2	4.2e-22
VEG64843.1|1989564_1989969_-	yopX family protein	NA	A0A141E233	Streptococcus_phage	34.2	8.0e-15
VEG64844.1|1989965_1990376_-	putative phage PVL protein	NA	NA	NA	NA	NA
VEG64845.1|1990362_1990557_-	Uncharacterised protein	NA	Q4ZC88	Staphylococcus_virus	56.7	2.8e-10
VEG64846.1|1990543_1991266_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64847.1|1991288_1991531_-	Uncharacterised protein	NA	Q4ZC89	Staphylococcus_virus	38.3	4.0e-06
VEG64848.1|1991521_1992112_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64849.1|1992117_1992294_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG64850.1|1992290_1992992_-	putative PTS system lactose-specific component IIBC	NA	A0A2H4J5E6	uncultured_Caudovirales_phage	73.6	7.3e-24
VEG64851.1|1993007_1993337_-	putative lactose-specific enzyme IIA	NA	NA	NA	NA	NA
VEG64852.1|1993637_1994252_-	lipoprotein	NA	NA	NA	NA	NA
VEG64853.1|1994441_1995569_-|lysis	autolysis and methicillin resistant-like protein	lysis	NA	NA	NA	NA
VEG64854.1|1995632_1997285_-	putative phosphomannomutase	NA	A0A1X9I671	Streptococcus_phage	37.1	4.9e-95
>prophage 6
LR134360	Staphylococcus condimenti strain NCTC13827 genome assembly, chromosome: 1	2650496	2234836	2243693	2650496		uncultured_Caudovirales_phage(66.67%)	7	NA	NA
VEG65082.1|2234836_2235793_-	FecCD transport family protein SstA	NA	A0A2H4IY97	uncultured_Caudovirales_phage	77.8	1.5e-133
VEG65083.1|2236094_2237069_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	93.2	2.7e-173
VEG65084.1|2237210_2239316_-	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	87.2	0.0e+00
VEG65085.1|2239287_2239815_-	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	68.5	1.6e-44
VEG65086.1|2240559_2241447_+	putative permease	NA	NA	NA	NA	NA
VEG65087.1|2241449_2241953_+	7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	65.0	6.0e-52
VEG65088.1|2242172_2243693_+	putative di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	37.3	2.2e-73
