The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134349	Bifidobacterium dentium strain NCTC11816 genome assembly, chromosome: 1	2635828	686085	732674	2635828	portal,integrase,head,tRNA,protease	Gordonia_phage(21.43%)	46	687773:687790	735485:735502
VEG23223.1|686085_687225_+|portal	phage-related portal protein	portal	A0A2R3ZZH4	Microbacterium_phage	37.3	1.7e-54
VEG23224.1|687211_688774_+|head	prohead peptidase	head	I6S2W2	Marinomonas_phage	38.2	2.9e-12
687773:687790	attL	GCGGCCATCGCCAAGACG	NA	NA	NA	NA
VEG23225.1|688770_689100_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23226.1|689096_689486_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23227.1|689500_689914_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23228.1|689935_690301_+	Uncharacterised protein	NA	A0A2P1CBZ9	Gordonia_phage	45.0	1.5e-20
VEG23229.1|690304_690595_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23230.1|690760_692623_+	phage tape measure protein	NA	A0A0D3MKT8	Leuconostoc_phage	66.2	1.9e-71
VEG23231.1|692622_694134_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23232.1|694149_695376_+	structural phage protein	NA	NA	NA	NA	NA
VEG23233.1|695372_695621_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23234.1|695633_696413_+	bacteriophage peptidoglycan hydrolase	NA	NA	NA	NA	NA
VEG23235.1|696409_696652_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23236.1|696631_697477_-|integrase	phage integrase	integrase	A0A0K0N6I5	Gordonia_phage	43.9	3.7e-54
VEG23237.1|697895_698108_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEG23238.1|698266_699355_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	37.0	6.9e-05
VEG23239.1|699363_700317_+	hemK Peptide release factor-glutamine N5-methyltransferase	NA	NA	NA	NA	NA
VEG23240.1|700380_701577_+	leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	NA	NA	NA	NA	NA
VEG23241.1|701607_702534_+	branched-chain amino acids ABC transporter permease	NA	NA	NA	NA	NA
VEG23242.1|702536_703628_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
VEG23243.1|703624_704425_+	branched-chain amino acids ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	22.1	9.6e-12
VEG23244.1|704424_705129_+	branched-chain amino acid transport ATP-binding protein livF	NA	NA	NA	NA	NA
VEG23245.1|705177_705840_+	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA	NA
VEG23246.1|705836_706976_+	undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
VEG23247.1|707219_708398_-|integrase	integrase/recombinase	integrase	Q9AZI0	Lactococcus_phage	24.1	1.7e-09
VEG23248.1|708394_709096_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23249.1|709223_709421_+	Phage regulatory protein	NA	NA	NA	NA	NA
VEG23250.1|709417_709789_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23251.1|709796_710021_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23252.1|710007_711330_+	phiRv2 prophage protein	NA	NA	NA	NA	NA
VEG23253.1|711365_711605_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23254.1|711674_712280_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23255.1|712410_712524_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23256.1|712803_714810_+|head,protease	phage prohead protease, HK97 family protein	head,protease	A0A142K7E0	Mycobacterium_phage	52.0	4.5e-42
VEG23257.1|715726_717253_+	inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.1	7.8e-95
VEG23258.1|717878_718862_-	CTP synthase (UTP-ammonia lyase)	NA	NA	NA	NA	NA
VEG23259.1|719423_720458_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
VEG23260.1|720790_722548_+	alpha-1,4-glucosidase	NA	NA	NA	NA	NA
VEG23261.1|722576_723857_+	sucrose transporter	NA	NA	NA	NA	NA
VEG23262.1|723978_724632_+	oligoribonuclease	NA	A0A1B3B0T8	Gordonia_phage	32.1	1.2e-17
VEG23263.1|724717_725611_+	hydrolase	NA	NA	NA	NA	NA
VEG23264.1|725712_727119_+	helicase	NA	G8DFG0	Emiliania_huxleyi_virus	35.3	7.7e-57
VEG23265.1|727138_727525_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG23266.1|727675_729511_+|tRNA	prolyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEG23267.1|729854_730580_+	Single-strand DNA binding protein	NA	A0A1V0E648	Streptomyces_phage	34.3	1.5e-08
VEG23268.1|730592_732674_-|protease	pepO Zinc metalloprotease	protease	E3T4I7	Cafeteria_roenbergensis_virus	29.9	1.4e-83
735485:735502	attR	GCGGCCATCGCCAAGACG	NA	NA	NA	NA
>prophage 2
LR134349	Bifidobacterium dentium strain NCTC11816 genome assembly, chromosome: 1	2635828	1608927	1674485	2635828	integrase,head,tRNA,tail,terminase	Lactococcus_phage(12.5%)	59	1667725:1667741	1677275:1677291
VEG24021.1|1608927_1609932_-|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
VEG24022.1|1609915_1611427_-|tRNA	tRNA 2-methylthioadenosine synthase	tRNA	NA	NA	NA	NA
VEG24023.1|1611486_1612233_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
VEG24024.1|1612236_1613226_-	drug/metabolite exporter family transporter	NA	NA	NA	NA	NA
VEG24025.1|1613347_1614202_-	integral membrane protein	NA	NA	NA	NA	NA
VEG24026.1|1614437_1616546_+	protein	NA	NA	NA	NA	NA
VEG24027.1|1616574_1617237_-	response regulatorof two-component system	NA	NA	NA	NA	NA
VEG24028.1|1617233_1618373_-	histidine kinase sensor of two-component system	NA	NA	NA	NA	NA
VEG24029.1|1618600_1619581_+	ABC transporter ATP-binding protein	NA	R4TX06	Phaeocystis_globosa_virus	23.9	5.5e-09
VEG24030.1|1619597_1620854_+	multidrug ABC transporter permease	NA	NA	NA	NA	NA
VEG24031.1|1620840_1622136_+	ABC transporter	NA	NA	NA	NA	NA
VEG24032.1|1622215_1623208_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
VEG24033.1|1623355_1624006_+	galactoside O-acetyltransferase	NA	NA	NA	NA	NA
VEG24034.1|1624155_1625508_+	Na+ driven multidrug efflux pump	NA	NA	NA	NA	NA
VEG24035.1|1625613_1628313_-	aconitate hydratase	NA	NA	NA	NA	NA
VEG24036.1|1628617_1629820_+|integrase	phage integrase	integrase	NA	NA	NA	NA
VEG24037.1|1630017_1630419_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24038.1|1630483_1633312_-	bifunctional DNA primase/polymerase	NA	NA	NA	NA	NA
VEG24039.1|1634225_1635569_-	bacteriophage protein	NA	A0A2K9VGT5	Pontimonas_phage	31.5	1.5e-28
VEG24040.1|1635920_1636139_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24041.1|1636128_1636359_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24042.1|1636355_1637111_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24043.1|1637422_1637593_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24044.1|1637589_1637760_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24045.1|1638246_1638630_+	bacteriophage protein gp1	NA	Q6VY56	Streptomyces_phage	44.7	2.5e-10
VEG24046.1|1638646_1640038_+|terminase	phage terminase	terminase	A0A2D1G5J6	Propionibacterium_phage	41.2	7.3e-84
VEG24047.1|1640053_1641487_+	phage protein	NA	A0A1B1IMS3	Lactococcus_phage	32.5	2.3e-32
VEG24048.1|1641458_1642238_+	phage protein	NA	NA	NA	NA	NA
VEG24049.1|1642342_1642831_+	phage helicase	NA	NA	NA	NA	NA
VEG24050.1|1642849_1643734_+|head	phage major head	head	NA	NA	NA	NA
VEG24051.1|1643748_1644162_+	phage protein	NA	A0A0K0N5R6	Gordonia_phage	41.9	3.5e-10
VEG24052.1|1644158_1644491_+	phage protein	NA	NA	NA	NA	NA
VEG24053.1|1644483_1644747_+	phage protein	NA	NA	NA	NA	NA
VEG24054.1|1644749_1645124_+	phage protein	NA	NA	NA	NA	NA
VEG24055.1|1645137_1645851_+|tail	phage major tail protein	tail	Q9F4J6	Streptococcus_phage	40.3	1.1e-27
VEG24056.1|1645945_1646215_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24057.1|1646286_1646652_+	Uncharacterised protein	NA	A0A222YZU6	Mycobacterium_phage	32.9	4.0e-05
VEG24058.1|1646655_1649190_+|tail	phage tail protein	tail	A0A2P1JTW1	Anoxybacillus_phage	38.1	2.7e-36
VEG24059.1|1649190_1650048_+	3-hydroxy-3-methylglutaryl CoA synthase	NA	NA	NA	NA	NA
VEG24060.1|1650057_1651413_+	phage minor structural protein	NA	I3NL88	Bifidobacterium_phage	35.5	1.7e-40
VEG24061.1|1651413_1653834_+	structural phage protein	NA	NA	NA	NA	NA
VEG24062.1|1653842_1654178_+	protein	NA	NA	NA	NA	NA
VEG24063.1|1654248_1655493_+	phage lysin-like lysozyme M1	NA	Q8LTJ6	Lactococcus_phage	42.9	1.5e-35
VEG24064.1|1655567_1656335_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG24065.1|1656321_1657629_-	cytosine methyl transferase	NA	F2Y148	Organic_Lake_phycodnavirus	29.8	2.8e-45
VEG24066.1|1657765_1658071_+	protein	NA	NA	NA	NA	NA
VEG24067.1|1658163_1658382_+	protein	NA	NA	NA	NA	NA
VEG24068.1|1658508_1660965_-	cation-transporting ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	27.3	2.0e-39
VEG24069.1|1661066_1661642_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEG24070.1|1661638_1662904_-|tRNA	tRNA (uracil-5-) -methyltransferase	tRNA	A0A1X9I6F4	Streptococcus_phage	25.3	2.2e-18
VEG24071.1|1662903_1663632_-	Mn2+/Zn2+ ABC transporter permease	NA	NA	NA	NA	NA
VEG24072.1|1663654_1664476_-	protein	NA	NA	NA	NA	NA
VEG24073.1|1664573_1665434_-	exodeoxyribonuclease	NA	NA	NA	NA	NA
VEG24074.1|1665662_1667672_-	dipeptide transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.2	6.1e-23
VEG24075.1|1667692_1668661_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
1667725:1667741	attL	CCTTGACGGCGTCGCCC	NA	NA	NA	NA
VEG24076.1|1668678_1669605_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
VEG24077.1|1669929_1671573_-	oligopeptide-binding protein OppA	NA	NA	NA	NA	NA
VEG24078.1|1671807_1673442_-	oligopeptide-binding protein OppA	NA	NA	NA	NA	NA
VEG24079.1|1673564_1674485_-|integrase	integrase/recombinase	integrase	A0A1I9SC88	Mycobacterium_phage	29.2	6.9e-14
1677275:1677291	attR	GGGCGACGCCGTCAAGG	NA	NA	NA	NA
>prophage 3
LR134349	Bifidobacterium dentium strain NCTC11816 genome assembly, chromosome: 1	2635828	1684046	1692666	2635828	transposase,integrase	Bacillus_phage(33.33%)	9	1681915:1681930	1694678:1694693
1681915:1681930	attL	TCACGCCGTCAACGGT	NA	NA	NA	NA
VEG24088.1|1684046_1684772_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	4.7e-42
VEG24089.1|1684852_1686208_-	sugar transporter	NA	NA	NA	NA	NA
VEG24090.1|1686250_1687048_-	phosphohydrolase	NA	G3MA14	Bacillus_virus	28.0	2.0e-17
VEG24091.1|1687177_1688017_-	chromosome partitioning protein ParA	NA	Q8JL10	Natrialba_phage	37.1	6.7e-24
VEG24092.1|1688112_1689069_-|integrase	integrase/recombinase	integrase	S5M872	Bacillus_phage	25.4	1.1e-14
VEG24093.1|1689176_1689560_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
VEG24094.1|1689612_1689807_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
VEG24095.1|1689825_1690524_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	31.4	1.6e-10
VEG24096.1|1690779_1692666_-	asparagine synthetase	NA	F2Y1H0	Organic_Lake_phycodnavirus	28.4	7.5e-31
1694678:1694693	attR	ACCGTTGACGGCGTGA	NA	NA	NA	NA
