assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636985.1_45889_C01	LR134333	Klebsiella oxytoca strain NCTC13727 genome assembly, chromosome: 1	1	1350598-1350725	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TGTAGCCCGGATAAGGCGTCAGCCGCAATCCGGGA	35	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA|33aa|down_4|LR134333.1_1354649_1354748_+	NA|309aa|up_9|LR134333.1_1337837_1338764_-	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional	NA|421aa|up_8|LR134333.1_1338898_1340161_+	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional	NA|337aa|up_7|LR134333.1_1340200_1341211_-	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|446aa|up_6|LR134333.1_1341505_1342843_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|476aa|up_5|LR134333.1_1342850_1344278_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|258aa|up_4|LR134333.1_1344346_1345120_+	PRK10225, PRK10225, Uxu operon transcriptional regulator	NA|159aa|up_3|LR134333.1_1345119_1345596_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|339aa|up_2|LR134333.1_1345556_1346573_-	PRK10727, PRK10727, HTH-type transcriptional regulator GalR	NA|720aa|up_1|LR134333.1_1347195_1349355_+	PRK08043, PRK08043, bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase	NA|398aa|up_0|LR134333.1_1349347_1350541_+	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional	NA|347aa|down_0|LR134333.1_1350845_1351886_-	PRK10625, tas, putative aldo-keto reductase; Provisional	NA|73aa|down_1|LR134333.1_1352123_1352342_-	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|238aa|down_2|LR134333.1_1352466_1353180_-	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|232aa|down_3|LR134333.1_1353366_1354062_-	PRK05070, PRK05070, DNA mismatch repair protein; Provisional	NA|33aa|down_4|LR134333.1_1354649_1354748_+	NA	NA|177aa|down_5|LR134333.1_1354744_1355275_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|749aa|down_6|LR134333.1_1355287_1357534_+	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase	NA|292aa|down_7|LR134333.1_1357829_1358705_+	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|265aa|down_8|LR134333.1_1358711_1359506_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|156aa|down_9|LR134333.1_1359726_1360194_+	PRK10506, PRK10506, prepilin peptidase-dependent protein
GCA_900636985.1_45889_C01	LR134333	Klebsiella oxytoca strain NCTC13727 genome assembly, chromosome: 1	2	1561045-1561144	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TCCCGGAGGCGATGCTGCGCATCTGTCCGGGCTAC	35	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|115aa|up_9|LR134333.1_1552556_1552901_-	PRK03681, hypA, hydrogenase/urease nickel incorporation protein HypA	NA|150aa|up_8|LR134333.1_1553109_1553559_+	PRK10198, PRK10198, formate hydrogenlyase regulator HycA	NA|203aa|up_7|LR134333.1_1553641_1554250_+	cd10554, HycB_like, HycB, HydN and similar proteins	NA|609aa|up_6|LR134333.1_1554246_1556073_+	PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed	NA|308aa|up_5|LR134333.1_1556075_1556999_+	COG0650, HyfC, Formate hydrogenlyase subunit 4 [Energy production and conversion]	NA|570aa|up_4|LR134333.1_1557016_1558726_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|181aa|up_3|LR134333.1_1558735_1559278_+	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|256aa|up_2|LR134333.1_1559277_1560045_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|137aa|up_1|LR134333.1_1560041_1560452_+	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|162aa|up_0|LR134333.1_1560444_1560930_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|475aa|down_0|LR134333.1_1561256_1562681_-	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|481aa|down_1|LR134333.1_1562707_1564150_-	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|338aa|down_2|LR134333.1_1564406_1565420_+	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|176aa|down_3|LR134333.1_1565554_1566082_+	PRK10330, PRK10330, electron transport protein HydN	NA|740aa|down_4|LR134333.1_1566094_1568314_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|338aa|down_5|LR134333.1_1568325_1569339_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|378aa|down_6|LR134333.1_1569569_1570703_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|482aa|down_7|LR134333.1_1570699_1572145_-	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|515aa|down_8|LR134333.1_1572332_1573877_+	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|322aa|down_9|LR134333.1_1573839_1574805_-	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ
GCA_900636985.1_45889_C01	LR134333	Klebsiella oxytoca strain NCTC13727 genome assembly, chromosome: 1	3	2221633-2221717	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	AGAGAGTTCCCCGCGCGAGCGGGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|110aa|up_5|LR134333.1_2215138_2215468_+,NA	NA|1246aa|up_9|LR134333.1_2203868_2207606_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|1246aa|up_8|LR134333.1_2207618_2211356_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|681aa|up_7|LR134333.1_2211492_2213535_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|370aa|up_6|LR134333.1_2213677_2214787_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|110aa|up_5|LR134333.1_2215138_2215468_+	NA	NA|106aa|up_4|LR134333.1_2215527_2215845_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|307aa|up_3|LR134333.1_2216014_2216935_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|448aa|up_2|LR134333.1_2217256_2218600_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|604aa|up_1|LR134333.1_2218602_2220414_-	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	NA|316aa|up_0|LR134333.1_2220513_2221461_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|258aa|down_0|LR134333.1_2221950_2222724_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|267aa|down_1|LR134333.1_2222720_2223521_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|351aa|down_2|LR134333.1_2223669_2224722_+	PRK09250, PRK09250, class I fructose-bisphosphate aldolase	NA|536aa|down_3|LR134333.1_2224908_2226516_-	cd07782, FGGY_YpCarbK_like, Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases	NA|250aa|down_4|LR134333.1_2226546_2227296_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|334aa|down_5|LR134333.1_2227553_2228555_+	cd06274, PBP1_FruR, ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs	NA|314aa|down_6|LR134333.1_2228577_2229519_-	pfam04198, Sugar-bind, Putative sugar-binding domain	NA|456aa|down_7|LR134333.1_2229725_2231093_+	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]	NA|488aa|down_8|LR134333.1_2231102_2232566_+	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|426aa|down_9|LR134333.1_2232635_2233913_+	TIGR00897, Alpha-ketoglutarate_permease, polyol permease family
GCA_900636985.1_45889_C01	LR134333	Klebsiella oxytoca strain NCTC13727 genome assembly, chromosome: 1	4	2808952-2809051	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GCTCATTCTGACCGTTCGGCGGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|468aa|up_9|LR134333.1_2798006_2799410_+	pfam09362, DUF1996, Domain of unknown function (DUF1996)	NA|527aa|up_8|LR134333.1_2799597_2801178_-	cd01535, 4RHOD_Repeat_4, Member of the Rhodanese Homology Domain superfamily, repeat 4	NA|199aa|up_7|LR134333.1_2801179_2801776_-	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]	NA|298aa|up_6|LR134333.1_2801883_2802777_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|362aa|up_5|LR134333.1_2802922_2804008_+	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite	NA|382aa|up_4|LR134333.1_2804004_2805150_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|325aa|up_3|LR134333.1_2805161_2806136_+	cd13558, PBP2_SsuA_like_2, Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold	NA|346aa|up_2|LR134333.1_2806132_2807170_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|332aa|up_1|LR134333.1_2807150_2808146_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|263aa|up_0|LR134333.1_2808139_2808928_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|718aa|down_0|LR134333.1_2809107_2811261_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|274aa|down_1|LR134333.1_2811686_2812508_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|342aa|down_2|LR134333.1_2812504_2813530_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|351aa|down_3|LR134333.1_2813526_2814579_+	pfam01032, FecCD, FecCD transport family	NA|316aa|down_4|LR134333.1_2814595_2815543_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|300aa|down_5|LR134333.1_2815539_2816439_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|257aa|down_6|LR134333.1_2816534_2817305_+	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|256aa|down_7|LR134333.1_2817369_2818137_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|241aa|down_8|LR134333.1_2818120_2818843_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|402aa|down_9|LR134333.1_2818943_2820149_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily
