The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134321	Shewanella putrefaciens strain NCTC10737 genome assembly, chromosome: 1	4999751	2272084	2282384	4999751		Faustovirus(12.5%)	13	NA	NA
VEF25903.1|2272084_2273299_+	Cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.8	5.7e-32
VEF25904.1|2273336_2273720_+	NifU-like protein	NA	A0A218MKD1	uncultured_virus	76.6	2.2e-51
VEF25905.1|2273734_2274058_+	Iron-sulfur cluster assembly protein	NA	A0A2H4N7N5	Lake_Baikal_phage	46.3	1.8e-22
VEF25906.1|2274074_2274599_+	Co-chaperone protein hscB homolog	NA	NA	NA	NA	NA
VEF25907.1|2274665_2276528_+	Hsc66	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	38.3	9.5e-103
VEF25908.1|2276536_2276875_+	2Fe-2S ferredoxin	NA	NA	NA	NA	NA
VEF25909.1|2277033_2277939_+	Alpha-aminoadipate--lysW ligase lysX	NA	I3ULC9	Synechococcus_phage	33.6	9.4e-40
VEF25910.1|2278052_2278250_+	FeS assembly protein IscX	NA	NA	NA	NA	NA
VEF25911.1|2278467_2278635_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEF25912.1|2278831_2279263_+	Nucleoside diphosphate kinase	NA	K7YW26	Megavirus	40.2	1.1e-17
VEF25913.1|2279625_2280069_+	16 kDa heat shock protein A	NA	A0A2L0V0Y9	Agrobacterium_phage	51.5	3.7e-21
VEF25914.1|2280171_2280666_-	Acetolactate synthase isozyme 3 small subunit	NA	NA	NA	NA	NA
VEF25915.1|2280665_2282384_-	Acetolactate synthase isozyme 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.0	1.6e-56
>prophage 2
LR134321	Shewanella putrefaciens strain NCTC10737 genome assembly, chromosome: 1	4999751	2477542	2489092	4999751	tRNA,protease	uncultured_Caudovirales_phage(28.57%)	12	NA	NA
VEF26077.1|2477542_2480296_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.5	1.1e-83
VEF26078.1|2480352_2480979_+	P20	NA	NA	NA	NA	NA
VEF26079.1|2480987_2482319_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.0	4.4e-78
VEF26080.1|2482311_2482686_+	camphor resistance protein CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.4	7.9e-09
VEF26081.1|2482704_2483991_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.0	4.0e-100
VEF26082.1|2484277_2484616_-	Sulfurtransferase TusE	NA	NA	NA	NA	NA
VEF26083.1|2484609_2484891_-|tRNA	tRNA 2-thiouridine synthesizing protein B	tRNA	NA	NA	NA	NA
VEF26084.1|2484890_2485247_-|tRNA	tRNA 2-thiouridine synthesizing protein C	tRNA	NA	NA	NA	NA
VEF26085.1|2485261_2485651_-	Sulfurtransferase TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	40.9	7.9e-20
VEF26086.1|2485720_2486380_-|protease	Modulator of FtsH protease YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	43.9	5.6e-34
VEF26087.1|2486802_2487705_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA	NA
VEF26088.1|2487862_2489092_+	Inner membrane transport protein ydhC	NA	S4TR35	Salmonella_phage	24.4	2.9e-15
>prophage 3
LR134321	Shewanella putrefaciens strain NCTC10737 genome assembly, chromosome: 1	4999751	3590721	3601854	4999751	tRNA	uncultured_Mediterranean_phage(33.33%)	8	NA	NA
VEF27009.1|3590721_3593346_-|tRNA	Alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	36.4	2.2e-65
VEF27010.1|3593715_3594129_-	Regulatory protein recX	NA	NA	NA	NA	NA
VEF27011.1|3594203_3595271_-	Recombinase A	NA	A0A2D1GPX2	Mycobacterium_phage	61.9	3.2e-111
VEF27012.1|3595655_3598226_+	DNA mismatch repair protein mutS	NA	A0A1V0SC35	Catovirus	22.5	1.2e-28
VEF27013.1|3598414_3599395_-	RNA polymerase sigma factor rpoS	NA	M4SMP8	Cyanophage	32.7	8.4e-34
VEF27014.1|3599475_3600372_-	Murein hydrolase activator NlpD precursor	NA	NA	NA	NA	NA
VEF27015.1|3600472_3601108_-	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	5.4e-34
VEF27016.1|3601104_3601854_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	1.7e-71
>prophage 4
LR134321	Shewanella putrefaciens strain NCTC10737 genome assembly, chromosome: 1	4999751	3637282	3644885	4999751		Staphylococcus_phage(50.0%)	7	NA	NA
VEF27042.1|3637282_3637762_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.0	2.7e-30
VEF27043.1|3637892_3638996_-	Riboflavin biosynthesis protein ribBA	NA	A0A2H4PQS2	Staphylococcus_phage	39.7	4.5e-68
VEF27044.1|3639091_3639748_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	34.0	1.1e-26
VEF27045.1|3639759_3640914_-	Riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	35.2	2.0e-50
VEF27046.1|3641060_3641510_-	Transcriptional repressor NrdR	NA	NA	NA	NA	NA
VEF27047.1|3641774_3643028_-	Pyridoxal-phosphate-dependent serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.9	2.4e-102
VEF27048.1|3643217_3644885_+	Uncharacterized ABC transporter ATP-binding protein HI_1252	NA	A0A1V0SKJ1	Klosneuvirus	28.2	1.9e-38
>prophage 5
LR134321	Shewanella putrefaciens strain NCTC10737 genome assembly, chromosome: 1	4999751	4788651	4803321	4999751		Bacillus_phage(44.44%)	11	NA	NA
VEF28012.1|4788651_4789584_-	Stalked cell differentiation-controlling protein	NA	W8CYM9	Bacillus_phage	40.8	4.1e-14
VEF28013.1|4789583_4791149_-	Polar-differentiation response regulator divK	NA	A0A1V0SGX0	Hokovirus	23.6	1.6e-18
VEF28014.1|4791156_4794474_-	Signal transduction histidine-protein kinase BarA	NA	A0A1V0SGX0	Hokovirus	43.1	1.4e-40
VEF28015.1|4794832_4795558_+	Transcriptional regulatory protein OmpR	NA	W8CYM9	Bacillus_phage	34.7	1.7e-31
VEF28016.1|4795600_4796917_+	Osmolarity sensor protein EnvZ	NA	W8CYF6	Bacillus_phage	24.0	8.7e-10
VEF28017.1|4797046_4799029_+	H3	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.8	6.7e-14
VEF28018.1|4799106_4799580_-	Putative peroxiredoxin sll1621	NA	M1I839	Pelagibacter_phage	47.4	5.5e-23
VEF28019.1|4799660_4800617_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF28020.1|4800975_4801266_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEF28021.1|4801268_4801964_+	Virulence transcriptional regulatory protein phoP	NA	Q6XM27	Feldmannia_irregularis_virus	25.7	4.0e-06
VEF28022.1|4801956_4803321_+	Virulence sensor histidine kinase PhoQ	NA	W8CYF6	Bacillus_phage	23.6	3.8e-08
