The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2005322	23654	80509	2005322	protease,bacteriocin,transposase,tRNA	Bacillus_phage(23.53%)	52	NA	NA
VEF17906.1|23654_24386_-|bacteriocin	bacteriocin operon protein ScnG homolog	bacteriocin	NA	NA	NA	NA
VEF17907.1|24385_25138_-|bacteriocin	bacteriocin operon component, ScnE-like protein	bacteriocin	NA	NA	NA	NA
VEF17908.1|25139_26048_-|bacteriocin	bacteriocin component ScnF-like protein	bacteriocin	A0A2H4PQG7	Staphylococcus_phage	44.9	1.6e-39
VEF17909.1|26335_27592_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	56.6	1.5e-128
VEF17910.1|28007_28118_+|transposase	transposase fragment	transposase	NA	NA	NA	NA
VEF17911.1|28170_29550_-	histidine kinase	NA	W8CYF6	Bacillus_phage	25.9	2.6e-12
VEF17912.1|29567_30266_-	response regulator	NA	W8CYM9	Bacillus_phage	33.0	1.7e-28
VEF17913.1|31868_33308_-|tRNA	glutamyl-tRNA(Gln) amidotransferase subunit B	tRNA	NA	NA	NA	NA
VEF17914.1|33307_34774_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	tRNA	NA	NA	NA	NA
VEF17915.1|34773_35076_-|tRNA	asparaginyl/glutamyl-tRNA amidotransferase subunit C	tRNA	NA	NA	NA	NA
VEF17916.1|35203_36955_-|tRNA	aspartyl-tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	32.1	4.4e-17
VEF17917.1|37212_37764_-	pyrazinamidase/nicotinamidase	NA	G3MA16	Bacillus_virus	36.3	8.3e-23
VEF17918.1|37765_38551_-	transcriptional repressor CodY	NA	NA	NA	NA	NA
VEF17919.1|38659_39874_-	aminotransferase AlaT	NA	NA	NA	NA	NA
VEF17920.1|40050_40587_+	biotin biosynthesis protein	NA	NA	NA	NA	NA
VEF17921.1|40684_41134_+	universal stress protein	NA	NA	NA	NA	NA
VEF17922.1|41411_42812_-	haloacid dehalogenase-like hydrolase	NA	A0A0H3UZF4	Geobacillus_virus	37.7	5.0e-24
VEF17923.1|42911_43829_+	L-asparaginase	NA	NA	NA	NA	NA
VEF17924.1|43855_44020_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEF17925.1|44162_46178_-	ATP-dependent DNA helicase, RecG	NA	NA	NA	NA	NA
VEF17926.1|46351_47467_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	31.2	3.4e-31
VEF17927.1|47463_47823_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA	NA
VEF17928.1|48092_49127_-	phospho-2-dehydro-3-deoxyheptonate aldolase	NA	S4W5F1	Pandoravirus	33.8	3.3e-41
VEF17929.1|49128_50160_-	DAHP synthase	NA	S4W5F1	Pandoravirus	34.4	1.1e-44
VEF17930.1|50179_52699_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
VEF17931.1|52875_53826_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
VEF17932.1|53994_54876_-	fructokinase	NA	NA	NA	NA	NA
VEF17933.1|55075_57070_-	PTS system sucrose-specific transporter subunits IIBCA	NA	NA	NA	NA	NA
VEF17934.1|57265_58705_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	24.4	5.7e-15
VEF17935.1|58707_59670_+	sucrose operon repressor	NA	NA	NA	NA	NA
VEF17936.1|59863_60292_-	transcription termination factor	NA	NA	NA	NA	NA
VEF17937.1|60284_60674_-	Alkaline shock protein	NA	NA	NA	NA	NA
VEF17938.1|60716_61277_-	elongation factor P	NA	NA	NA	NA	NA
VEF17939.1|61416_62121_+	potassium channel family protein	NA	NA	NA	NA	NA
VEF17940.1|62168_62621_-	deoxycytidylate deaminase	NA	A7KUY9	Bacillus_phage	55.6	7.3e-33
VEF17941.1|62782_63847_-	aminopeptidase	NA	A0A0P0I8D7	Acinetobacter_phage	25.9	5.9e-17
VEF17942.1|63836_66668_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.4	1.8e-310
VEF17943.1|67338_68283_+	magnesium/cobalt transport protein	NA	NA	NA	NA	NA
VEF17944.1|68436_69099_+	membrane protein	NA	NA	NA	NA	NA
VEF17945.1|69192_69594_+	LytTr DNA-binding domain-containing protein	NA	NA	NA	NA	NA
VEF17946.1|69590_70277_+	putative uncharacterized conserved secreted protein	NA	NA	NA	NA	NA
VEF17947.1|70284_71004_-	TraX family protein	NA	NA	NA	NA	NA
VEF17948.1|71322_71562_-	SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent	NA	NA	NA	NA	NA
VEF17949.1|71591_72086_-	single-stranded DNA-binding protein	NA	A0A286QNX2	Streptococcus_phage	70.5	1.8e-56
VEF17950.1|72103_72394_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
VEF17951.1|72549_72795_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF17952.1|73099_73303_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEF17953.1|74340_75486_+	A/G-specific DNA glycosylase	NA	NA	NA	NA	NA
VEF17954.1|75677_76727_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
VEF17955.1|76824_77139_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	46.2	1.1e-16
VEF17956.1|77213_79544_-	DNA mismatch repair protein	NA	Q94M10	Lactobacillus_phage	50.9	1.6e-22
VEF17957.1|79762_80509_-|protease	CAAX amino terminal protease	protease	NA	NA	NA	NA
>prophage 2
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2005322	494312	557782	2005322	bacteriocin,transposase,integrase,tRNA,protease	Cafeteria_roenbergensis_virus(16.67%)	60	513220:513234	560684:560698
VEF18322.1|494312_494759_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
VEF18323.1|495088_497794_+	dextranase precursor	NA	NA	NA	NA	NA
VEF18324.1|498139_498853_-	transcriptional regulator	NA	NA	NA	NA	NA
VEF18325.1|499026_500994_+	PTS system trehalose-specific transporter subunits IIBCA	NA	NA	NA	NA	NA
VEF18326.1|501019_502648_+	trehalose-6-phosphate hydrolase TreA	NA	NA	NA	NA	NA
VEF18327.1|503196_505092_+	peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	28.6	5.2e-64
VEF18328.1|505237_506194_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
VEF18329.1|506984_508838_+	Predicted membrane protein	NA	NA	NA	NA	NA
VEF18330.1|509026_509812_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
VEF18331.1|509878_510925_+	elongation factor Ts	NA	NA	NA	NA	NA
VEF18332.1|511455_512535_+	3-oxoacyl-[acyl-carrier-protein] synthase,KASIII	NA	NA	NA	NA	NA
VEF18333.1|512549_513761_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
513220:513234	attL	CTAATAATAAAAATA	NA	NA	NA	NA
VEF18334.1|513761_514208_+	Predicted nucleic-acid-binding protein containing a Zn-ribbon	NA	NA	NA	NA	NA
VEF18335.1|514214_517289_+	bacitracin synthetase 1	NA	A0A2K9KZV5	Tupanvirus	26.0	8.4e-64
VEF18336.1|517292_520034_+	polyketide synthase	NA	D0R7J2	Paenibacillus_phage	35.8	2.0e-40
VEF18337.1|520222_520726_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF18338.1|520855_521398_+	transcriptional regulator	NA	NA	NA	NA	NA
VEF18339.1|521539_522082_-	transcriptional regulator	NA	NA	NA	NA	NA
VEF18340.1|522260_524057_+	permease	NA	NA	NA	NA	NA
VEF18341.1|524262_524601_-	putative small multi-drug export proteins	NA	NA	NA	NA	NA
VEF18342.1|524631_524727_-	putative small multi-drug export proteins	NA	NA	NA	NA	NA
VEF18343.1|524898_525363_+	transcriptional repressor CtsR	NA	NA	NA	NA	NA
VEF18344.1|525359_527801_+|protease	class III stress response-related ATP-dependent Clp protease, ATP-binding subunit	protease	A0A2C9CXH0	Yersinia_phage	42.1	2.0e-121
VEF18345.1|528086_530474_+	beta-D-fructosyltransferase	NA	NA	NA	NA	NA
VEF18346.1|530663_531350_-	transcriptional regulator	NA	E8ZDN4	Streptococcus_phage	52.7	2.6e-66
VEF18347.1|531669_531978_+	SSU ribosomal protein S10p (S20e)	NA	NA	NA	NA	NA
VEF18348.1|532212_532839_+	LSU ribosomal protein L3p (L3e)	NA	NA	NA	NA	NA
VEF18349.1|532863_533487_+	50S ribosomal protein L4	NA	NA	NA	NA	NA
VEF18350.1|533486_533786_+	50S ribosomal protein L23	NA	NA	NA	NA	NA
VEF18351.1|533803_534637_+	50S ribosomal protein L2	NA	NA	NA	NA	NA
VEF18352.1|534738_535017_+	30S ribosomal protein S19	NA	NA	NA	NA	NA
VEF18353.1|535033_535378_+	LSU ribosomal protein L22p (L17e)	NA	NA	NA	NA	NA
VEF18354.1|535390_536044_+	SSU ribosomal protein S3p (S3e)	NA	NA	NA	NA	NA
VEF18355.1|536047_536461_+	LSU ribosomal protein L16p (L10e)	NA	NA	NA	NA	NA
VEF18356.1|536470_536680_+	50S ribosomal protein L29	NA	NA	NA	NA	NA
VEF18357.1|536700_536961_+	SSU ribosomal protein S17p (S11e)	NA	NA	NA	NA	NA
VEF18358.1|536987_537356_+	LSU ribosomal protein L14p (L23e)	NA	NA	NA	NA	NA
VEF18359.1|537521_537827_+	LSU ribosomal protein L24p (L26e)	NA	NA	NA	NA	NA
VEF18360.1|537850_538393_+	LSU ribosomal protein L5p (L11e)	NA	NA	NA	NA	NA
VEF18361.1|538849_539248_+	30S ribosomal protein S8	NA	NA	NA	NA	NA
VEF18362.1|539661_540198_+	50S ribosomal protein L6	NA	NA	NA	NA	NA
VEF18363.1|540287_540644_+	50S ribosomal protein L18	NA	NA	NA	NA	NA
VEF18364.1|540662_541157_+	SSU ribosomal protein S5p (S2e)	NA	NA	NA	NA	NA
VEF18365.1|541170_541353_+	50S ribosomal protein L30	NA	NA	NA	NA	NA
VEF18366.1|541645_542086_+	50S ribosomal protein L15	NA	NA	NA	NA	NA
VEF18367.1|542085_543390_+	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
VEF18368.1|543619_544258_+	adenylate kinase	NA	NA	NA	NA	NA
VEF18369.1|544376_544595_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
VEF18370.1|544620_544737_+	LSU ribosomal protein L36p	NA	NA	NA	NA	NA
VEF18371.1|544756_545122_+	SSU ribosomal protein S13p (S18e)	NA	NA	NA	NA	NA
VEF18372.1|545139_545523_+	SSU ribosomal protein S11p (S14e)	NA	NA	NA	NA	NA
VEF18373.1|545568_546507_+	DNA-directed RNA polymerase alpha subunit	NA	NA	NA	NA	NA
VEF18374.1|546525_546912_+	LSU ribosomal protein L17p	NA	NA	NA	NA	NA
VEF18375.1|547137_548424_+	gamma-glutamylcysteine synthetase putative	NA	NA	NA	NA	NA
VEF18376.1|554881_555100_-|integrase	integrase	integrase	A0A2D1GPE8	Lactobacillus_phage	41.2	3.9e-08
VEF18377.1|555762_556017_-|integrase	putative integrase	integrase	NA	NA	NA	NA
VEF18378.1|556218_556407_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEF18379.1|556442_556835_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
VEF18380.1|556929_557445_-|transposase	putative transposase	transposase	NA	NA	NA	NA
VEF18381.1|557677_557782_-|transposase	putative transposase	transposase	NA	NA	NA	NA
560684:560698	attR	CTAATAATAAAAATA	NA	NA	NA	NA
>prophage 3
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2005322	1232300	1239149	2005322		Bacillus_phage(50.0%)	7	NA	NA
VEF18999.1|1232300_1232789_-	7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	57.9	5.6e-47
VEF19000.1|1232801_1233518_-	pyruvate-formate lyase-activating enzyme	NA	E7DN68	Pneumococcus_phage	48.0	1.4e-62
VEF19001.1|1233514_1233961_-	6-pyruvoyl-tetrahydropterin synthase	NA	J9PV91	Bacillus_phage	60.6	3.8e-42
VEF19002.1|1233960_1234614_-	ATPase, confers aluminum resistance	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	52.8	5.9e-60
VEF19003.1|1235164_1235599_+	transcriptional regulator	NA	NA	NA	NA	NA
VEF19004.1|1235602_1237405_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	1.3e-32
VEF19005.1|1237394_1239149_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.8	6.1e-43
>prophage 4
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2005322	1385683	1394467	2005322		Bacillus_phage(50.0%)	7	NA	NA
VEF19146.1|1385683_1387399_+	putative phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	82.5	7.5e-272
VEF19147.1|1387529_1389275_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.2	7.6e-54
VEF19148.1|1389271_1391005_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.8	6.9e-39
VEF19149.1|1391014_1391629_-	transposon-like protein	NA	A0A223LKM8	Bacillus_phage	37.6	1.2e-22
VEF19150.1|1391630_1392608_-	Pseudouridylate synthases, 23S RNA-specific	NA	NA	NA	NA	NA
VEF19151.1|1392604_1393867_-	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	52.1	1.3e-98
VEF19152.1|1393876_1394467_-	putative translation factor	NA	A0A291ATS8	Pandoravirus	33.2	6.2e-16
>prophage 5
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2005322	1888876	1902786	2005322		Streptococcus_phage(84.62%)	17	NA	NA
VEF20261.1|1888876_1889770_+	putative exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	76.9	1.8e-123
VEF20267.1|1889834_1890458_-	endonuclease III	NA	NA	NA	NA	NA
VEF20272.1|1890522_1890876_-	arsenate reductase	NA	M1PLC0	Streptococcus_phage	67.0	4.8e-40
VEF20278.1|1890912_1891407_-	methylated-DNA--protein-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	56.7	5.7e-47
VEF20283.1|1891495_1892677_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	79.3	1.8e-179
VEF20289.1|1892762_1893317_-	acetyltransferase	NA	M1PSC3	Streptococcus_phage	63.9	4.7e-50
VEF20294.1|1893725_1894817_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	NA	M1Q1P2	Streptococcus_phage	79.3	1.2e-169
VEF20301.1|1895036_1895378_-	nitrogen regulatory protein PII	NA	NA	NA	NA	NA
VEF20306.1|1895393_1896629_-	ammonium transporter	NA	NA	NA	NA	NA
VEF20312.1|1896934_1897801_-	putative methylase	NA	M1PLC5	Streptococcus_phage	73.9	1.7e-115
VEF20321.1|1897806_1898139_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	58.2	6.1e-29
VEF20323.1|1898131_1898938_-	signal peptidase II	NA	NA	NA	NA	NA
VEF20325.1|1898934_1899810_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	54.1	7.6e-79
VEF20327.1|1899822_1900461_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.6	3.4e-76
VEF20329.1|1900536_1901196_-	acetoin utilization protein, acetoin dehydrogenase	NA	M1NSC5	Streptococcus_phage	60.6	8.6e-67
VEF20331.1|1901311_1902022_-	putative branched chain amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.9	7.2e-19
VEF20333.1|1902021_1902786_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	4.7e-16
