assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	1	595821-596072	1	PILER-CR	no		cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TTTTGGAGGAGCAGAAAGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	54	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|180aa|down_1|LR134315.1_597569_598109_-	NA|158aa|up_9|LR134315.1_585395_585869_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|LR134315.1_585891_587172_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|LR134315.1_587420_588230_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|LR134315.1_588284_588749_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|LR134315.1_588748_589084_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|LR134315.1_589232_590804_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|LR134315.1_591178_592513_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|LR134315.1_592528_593299_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|LR134315.1_593328_594219_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|LR134315.1_594315_595461_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|389aa|down_0|LR134315.1_596381_597548_-	PRK09716, PRK09716, YhaC family protein	NA|180aa|down_1|LR134315.1_597569_598109_-	NA	NA|313aa|down_2|LR134315.1_598897_599836_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_3|LR134315.1_599934_600924_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_4|LR134315.1_600945_602277_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_5|LR134315.1_602302_603511_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_6|LR134315.1_603544_605839_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_7|LR134315.1_605852_606242_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_8|LR134315.1_606313_607678_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_9|LR134315.1_607952_609284_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	2	977559-978563	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	16,16,16	16	Unclear	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|LR134315.1_976268_976409_-,NA	NA|919aa|up_9|LR134315.1_964152_966909_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|LR134315.1_966965_968267_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|LR134315.1_968314_970549_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|LR134315.1_970626_970875_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|LR134315.1_970874_971210_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|LR134315.1_971280_972072_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|LR134315.1_972299_973937_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|LR134315.1_974024_975323_+	PRK00077, eno, enolase; Provisional	NA|47aa|up_1|LR134315.1_976268_976409_-	NA	NA|224aa|up_0|LR134315.1_976547_977219_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|LR134315.1_979201_980680_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|350aa|down_1|LR134315.1_980706_981756_-	cd06174, MFS, Major Facilitator Superfamily	NA|92aa|down_2|LR134315.1_981830_982106_+	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|126aa|down_3|LR134315.1_982150_982528_+	pfam03400, DDE_Tnp_IS1, IS1 transposase	NA|416aa|down_4|LR134315.1_982713_983961_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|LR134315.1_983982_985392_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|LR134315.1_985369_986149_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_7|LR134315.1_986145_987006_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_8|LR134315.1_987153_987729_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|LR134315.1_987745_988006_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	3	1003612-1004067	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,7	7	TypeI-E	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|245aa|up_9|LR134315.1_993611_994346_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|900aa|up_8|LR134315.1_994956_997656_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|390aa|up_7|LR134315.1_997753_998923_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas8e|110aa|up_6|LR134315.1_998986_999316_+	cd09669, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|179aa|up_5|LR134315.1_999312_999849_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|LR134315.1_999860_1000916_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|LR134315.1_1000926_1001673_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|LR134315.1_1001654_1002305_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|LR134315.1_1002301_1003222_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LR134315.1_1003221_1003515_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|LR134315.1_1004148_1005186_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134315.1_1005437_1006346_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|LR134315.1_1006347_1007775_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LR134315.1_1007774_1008380_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134315.1_1008429_1008753_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134315.1_1008946_1009258_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134315.1_1009276_1009987_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134315.1_1009986_1010466_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134315.1_1010462_1011512_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LR134315.1_1011492_1012254_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	4	2107673-2107796	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|79aa|up_9|LR134315.1_2096579_2096816_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|LR134315.1_2097126_2098539_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134315.1_2099095_2099305_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134315.1_2099760_2100387_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134315.1_2100407_2102510_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134315.1_2102522_2103161_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|LR134315.1_2103224_2103893_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|LR134315.1_2103889_2104675_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_1|LR134315.1_2104726_2105491_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_0|LR134315.1_2105502_2107107_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134315.1_2108110_2109367_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134315.1_2109407_2110781_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134315.1_2110995_2111637_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134315.1_2111676_2112825_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134315.1_2113115_2114327_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134315.1_2114439_2115372_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134315.1_2115368_2116394_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134315.1_2116947_2118117_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134315.1_2118262_2118844_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|LR134315.1_2118971_2119787_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	6	2910674-2910822	5,4	CRISPRCasFinder,PILER-CR	no		cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	ATTTCTAAGCTGCCTGTACGGCAGTGAAC,ATTTCTAAGCTGCCTGTACGGCAGTGAAC	29,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|431aa|up_9|LR134315.1_2895682_2896975_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|LR134315.1_2897065_2898409_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|LR134315.1_2898419_2899031_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|LR134315.1_2899185_2903292_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|LR134315.1_2903426_2903921_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|LR134315.1_2904464_2905430_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|LR134315.1_2905552_2907319_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|LR134315.1_2907319_2909041_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|LR134315.1_2909082_2909787_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|LR134315.1_2910071_2910290_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|LR134315.1_2911034_2913311_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|LR134315.1_2913341_2913662_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|LR134315.1_2913984_2914209_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|LR134315.1_2914281_2916228_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|LR134315.1_2916224_2917340_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|331aa|down_5|LR134315.1_2917454_2918447_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|LR134315.1_2918443_2920102_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|LR134315.1_2920527_2921223_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|LR134315.1_2921717_2922617_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|LR134315.1_2922760_2924413_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	7	3064596-3064740	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|171aa|up_9|LR134315.1_3051960_3052473_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|303aa|up_8|LR134315.1_3053880_3054789_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|LR134315.1_3054980_3057002_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|LR134315.1_3057580_3058258_-	COG0132, BioD, Dethiobiotin synthetase [Coenzyme metabolism]	NA|252aa|up_5|LR134315.1_3058250_3059006_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|LR134315.1_3058992_3060147_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|LR134315.1_3060143_3061184_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|LR134315.1_3061270_3062560_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|LR134315.1_3062618_3063095_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|LR134315.1_3063246_3064530_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|LR134315.1_3064763_3067025_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|327aa|down_1|LR134315.1_3067218_3068199_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|478aa|down_2|LR134315.1_3068407_3069841_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_3|LR134315.1_3069916_3070969_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_4|LR134315.1_3071152_3072106_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_5|LR134315.1_3072146_3073142_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_6|LR134315.1_3073296_3074115_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_7|LR134315.1_3074115_3075174_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_8|LR134315.1_3075176_3075866_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_9|LR134315.1_3075865_3076639_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	8	3783408-3783523	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	AACGCCTGATGCGACGCTGACGCGTCTTATC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|202aa|up_9|LR134315.1_3770769_3771375_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|387aa|up_8|LR134315.1_3771423_3772584_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|552aa|up_7|LR134315.1_3772923_3774579_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|LR134315.1_3774742_3775726_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|LR134315.1_3775701_3777312_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|LR134315.1_3777295_3777994_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|LR134315.1_3778107_3778872_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|LR134315.1_3778957_3779836_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|LR134315.1_3780174_3781875_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|LR134315.1_3781885_3783388_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|LR134315.1_3783587_3784283_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|LR134315.1_3784357_3786709_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|LR134315.1_3786873_3789780_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|LR134315.1_3789791_3790451_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|272aa|down_4|LR134315.1_3790567_3791383_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_5|LR134315.1_3791637_3793992_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_6|LR134315.1_3794044_3795331_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_7|LR134315.1_3795330_3796320_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_8|LR134315.1_3796316_3797138_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_9|LR134315.1_3797140_3797518_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCA_900636795.1_44087_H02	LR134315	Escherichia coli strain NCTC9064 genome assembly, chromosome: 1	9	3806440-3806576	5	PILER-CR	no		cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|73aa|down_7|LR134315.1_3814523_3814742_+	NA|126aa|up_9|LR134315.1_3797140_3797518_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|LR134315.1_3797524_3798367_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|197aa|up_7|LR134315.1_3798444_3799035_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|LR134315.1_3799115_3800978_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|LR134315.1_3800970_3801501_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|446aa|up_4|LR134315.1_3801608_3802946_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|LR134315.1_3803004_3803292_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|LR134315.1_3803288_3804575_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|LR134315.1_3804625_3805567_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|LR134315.1_3805581_3806352_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|LR134315.1_3806825_3808340_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|LR134315.1_3808369_3809512_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|LR134315.1_3809640_3810858_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|LR134315.1_3810931_3812485_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|LR134315.1_3812593_3813379_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|LR134315.1_3813384_3813975_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|LR134315.1_3814093_3814489_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|73aa|down_7|LR134315.1_3814523_3814742_+	NA	NA|1074aa|down_8|LR134315.1_3814749_3817971_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_9|LR134315.1_3817988_3819137_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit
