assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	1	59176-59312	1	CRISPRCasFinder	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	TCTAAAGATGATGGTCTGGCGTCAATCGGCTGCTCAAATGTGCTTTGGAC	50	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|111aa|up_7|LR134306.1_54313_54646_+,NA|68aa|up_4|LR134306.1_55590_55794_+,NA|90aa|up_0|LR134306.1_58800_59070_-,NA|48aa|down_8|LR134306.1_93961_94105_-	NA|463aa|up_9|LR134306.1_50217_51606_+	PRK04311, PRK04311, selenocysteine synthase; Provisional	NA|651aa|up_8|LR134306.1_51602_53555_+	PRK10512, PRK10512, selenocysteinyl-tRNA-specific translation factor; Provisional	NA|111aa|up_7|LR134306.1_54313_54646_+	NA	NA|91aa|up_6|LR134306.1_54659_54932_-	pfam13988, DUF4225, Protein of unknown function (DUF4225)	NA|169aa|up_5|LR134306.1_54963_55470_-	pfam13988, DUF4225, Protein of unknown function (DUF4225)	NA|68aa|up_4|LR134306.1_55590_55794_+	NA	NA|410aa|up_3|LR134306.1_55942_57172_-	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter	NA|172aa|up_2|LR134306.1_57556_58072_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|262aa|up_1|LR134306.1_58125_58911_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|90aa|up_0|LR134306.1_58800_59070_-	NA	NA|505aa|down_0|LR134306.1_59664_61179_+	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|816aa|down_1|LR134306.1_61340_63788_-	PRK14986, PRK14986, glycogen phosphorylase; Provisional	NA|477aa|down_2|LR134306.1_64089_65520_-	PRK00654, glgA, glycogen synthase GlgA	NA|429aa|down_3|LR134306.1_65730_67017_-	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|663aa|down_4|LR134306.1_67026_69015_-	PRK03705, PRK03705, glycogen debranching protein GlgX	NA|728aa|down_5|LR134306.1_69016_71200_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|566aa|down_6|LR134306.1_71705_73403_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|6305aa|down_7|LR134306.1_73610_92525_-	pfam11924, IAT_beta, Inverse autotransporter, beta-domain	NA|48aa|down_8|LR134306.1_93961_94105_-	NA	NA|96aa|down_9|LR134306.1_94262_94550_-	pfam18593, CdiI_2, CdiI immunity protein
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	2	367200-367288	2	CRISPRCasFinder	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	GCGAAACACAGAAATTACGCGTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|262aa|up_8|LR134306.1_353722_354508_+,NA|40aa|up_0|LR134306.1_361762_361882_+,NA	NA|261aa|up_9|LR134306.1_352847_353630_+	PRK00241, nudC, NAD(+) diphosphatase	NA|262aa|up_8|LR134306.1_353722_354508_+	NA	NA|356aa|up_7|LR134306.1_354626_355694_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|247aa|up_6|LR134306.1_355723_356464_+	PRK11617, PRK11617, deoxyribonuclease V	NA|197aa|up_5|LR134306.1_356509_357100_+	COG3068, COG3068, Uncharacterized protein conserved in bacteria [Function unknown]	NA|92aa|up_4|LR134306.1_357288_357564_+	PRK10753, PRK10753, DNA-binding protein HU-alpha	NA|218aa|up_3|LR134306.1_357613_358267_+	pfam07356, DUF1481, Protein of unknown function (DUF1481)	NA|429aa|up_2|LR134306.1_358415_359702_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|530aa|up_1|LR134306.1_359761_361351_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|40aa|up_0|LR134306.1_361762_361882_+	NA	NA|403aa|down_0|LR134306.1_367717_368926_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|177aa|down_1|LR134306.1_368983_369514_-	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	NA|196aa|down_2|LR134306.1_369513_370101_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|90aa|down_3|LR134306.1_370254_370524_+	COG3084, COG3084, Uncharacterized protein conserved in bacteria [Function unknown]	NA|329aa|down_4|LR134306.1_370614_371601_+	PRK11768, PRK11768, serine/threonine protein kinase	NA|208aa|down_5|LR134306.1_371628_372252_+	PRK10954, PRK10954, thiol:disulfide interchange protein DsbA	NA|933aa|down_6|LR134306.1_372742_375541_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|217aa|down_7|LR134306.1_375948_376599_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|189aa|down_8|LR134306.1_377343_377910_+	PRK05244, PRK05244, Der GTPase-activating protein YihI	NA|458aa|down_9|LR134306.1_378092_379466_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	3	486126-486238	3	CRISPRCasFinder	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	CTTCACTCGGCTGCTCAAATGTGCTTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA,NA	NA|343aa|up_9|LR134306.1_473565_474594_-	PRK11041, PRK11041, DNA-binding transcriptional regulator CytR; Provisional	NA|733aa|up_8|LR134306.1_474947_477146_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|72aa|up_7|LR134306.1_477398_477614_+	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|152aa|up_6|LR134306.1_478138_478594_-	COG4682, COG4682, Predicted membrane protein [Function unknown]	NA|106aa|up_5|LR134306.1_478942_479260_-	PRK05264, PRK05264, met regulon transcriptional regulator MetJ	NA|387aa|up_4|LR134306.1_479637_480798_+	PRK08045, PRK08045, cystathionine gamma-synthase; Provisional	NA|812aa|up_3|LR134306.1_480800_483236_+	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional	NA|295aa|up_2|LR134306.1_483468_484353_+	PRK09432, metF, methylenetetrahydrofolate reductase	NA|262aa|up_1|LR134306.1_484561_485347_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|172aa|up_0|LR134306.1_485400_485916_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|879aa|down_0|LR134306.1_486658_489295_-	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|388aa|down_1|LR134306.1_489668_490832_-	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|335aa|down_2|LR134306.1_491082_492087_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|258aa|down_3|LR134306.1_492255_493029_+	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|458aa|down_4|LR134306.1_493207_494581_+	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|831aa|down_5|LR134306.1_495179_497672_+	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|206aa|down_6|LR134306.1_497893_498511_+	pfam06438, HasA, Heme-binding protein A (HasA)	NA|603aa|down_7|LR134306.1_498676_500485_+	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|393aa|down_8|LR134306.1_500560_501739_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|268aa|down_9|LR134306.1_501952_502756_+	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	4	740018-740297	1	PILER-CR	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	GATAGGGCGCGAGGGGAATGACTGTCCACGACACTTTTTATAAAAGAAAGCGGC	54	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA,NA	NA|1486aa|up_9|LR134306.1_724117_728575_-	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|330aa|up_8|LR134306.1_729331_730321_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|779aa|up_7|LR134306.1_730584_732921_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|218aa|up_6|LR134306.1_733162_733816_+	PRK11780, PRK11780, isoprenoid biosynthesis glyoxalase ElbB	NA|242aa|up_5|LR134306.1_733812_734538_+	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|192aa|up_4|LR134306.1_734744_735320_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|up_3|LR134306.1_735330_735921_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|118aa|up_2|LR134306.1_736191_736545_-	PRK12497, PRK12497, YraN family protein	NA|658aa|up_1|LR134306.1_736643_738617_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|300aa|up_0|LR134306.1_738679_739579_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|235aa|down_0|LR134306.1_740402_741107_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|298aa|down_1|LR134306.1_741368_742262_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|329aa|down_2|LR134306.1_742392_743379_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|132aa|down_3|LR134306.1_743464_743860_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|95aa|down_4|LR134306.1_744163_744448_-	pfam13997, YqjK, YqjK-like protein	NA|132aa|down_5|LR134306.1_744444_744840_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_6|LR134306.1_744842_745148_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]	NA|127aa|down_7|LR134306.1_745302_745683_-	pfam06476, DUF1090, Protein of unknown function (DUF1090)	NA|130aa|down_8|LR134306.1_745908_746298_-	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA	NA|233aa|down_9|LR134306.1_746294_746993_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	5	1762161-1762272	4	CRISPRCasFinder	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	TTTGAAGAAAATTCCTAATGGTTAATTAAT	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|222aa|up_5|LR134306.1_1754391_1755057_-,NA	NA|365aa|up_9|LR134306.1_1748918_1750013_+	PRK10760, PRK10760, murein hydrolase B; Provisional	NA|201aa|up_8|LR134306.1_1751254_1751857_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|161aa|up_7|LR134306.1_1752229_1752712_-	COG5435, COG5435, Uncharacterized conserved protein [Function unknown]	NA|561aa|up_6|LR134306.1_1752708_1754391_-	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]	NA|222aa|up_5|LR134306.1_1754391_1755057_-	NA	NA|446aa|up_4|LR134306.1_1755053_1756391_-	pfam11397, GlcNAc, Glycosyltransferase (GlcNAc)	NA|344aa|up_3|LR134306.1_1756430_1757462_-	pfam00419, Fimbrial, Fimbrial protein	NA|398aa|up_2|LR134306.1_1757468_1758662_-	COG3515, COG3515, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|342aa|up_1|LR134306.1_1758760_1759786_-	COG3520, COG3520, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|612aa|up_0|LR134306.1_1759785_1761621_-	COG3519, COG3519, Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and    vesicular transport]	NA|892aa|down_0|LR134306.1_1762450_1765126_+	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|182aa|down_1|LR134306.1_1765326_1765872_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|254aa|down_2|LR134306.1_1766028_1766790_+	PRK09926, PRK09926, fimbrial chaperone	NA|891aa|down_3|LR134306.1_1766917_1769590_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|203aa|down_4|LR134306.1_1769574_1770183_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|175aa|down_5|LR134306.1_1770289_1770814_+	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|501aa|down_6|LR134306.1_1770837_1772340_+	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|190aa|down_7|LR134306.1_1772588_1773158_+	COG3157, Hcp, Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion,    and vesicular transport]	NA|194aa|down_8|LR134306.1_1773410_1773992_+	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|450aa|down_9|LR134306.1_1773995_1775345_+	COG3522, COG3522, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	6	1957763-1960375	5,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Type I-F	GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,TTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,27,28	0	0	NA	NA	I-F:I-F:I-F:I-F	43,43,39,39	43	TypeI-F	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|372aa|up_4|LR134306.1_1951993_1953109_+,NA|425aa|up_3|LR134306.1_1953147_1954422_+,NA|70aa|down_9|LR134306.1_1972431_1972641_+	NA|429aa|up_9|LR134306.1_1946608_1947895_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|292aa|up_8|LR134306.1_1948003_1948879_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|275aa|up_7|LR134306.1_1948879_1949704_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|352aa|up_6|LR134306.1_1949850_1950906_+	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|312aa|up_5|LR134306.1_1950935_1951871_+	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|372aa|up_4|LR134306.1_1951993_1953109_+	NA	NA|425aa|up_3|LR134306.1_1953147_1954422_+	NA	NA|89aa|up_2|LR134306.1_1954567_1954834_+	pfam01527, HTH_Tnp_1, Transposase	NA|267aa|up_1|LR134306.1_1954854_1955655_+	pfam00665, rve, Integrase core domain	NA|415aa|up_0|LR134306.1_1956180_1957425_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	cas1|327aa|down_0|LR134306.1_1960734_1961715_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1097aa|down_1|LR134306.1_1961711_1965002_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|449aa|down_2|LR134306.1_1965411_1966758_+	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	cas5f|317aa|down_3|LR134306.1_1966754_1967705_+	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas7f|335aa|down_4|LR134306.1_1967722_1968727_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|LR134306.1_1968737_1969292_+	cd09674, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|340aa|down_6|LR134306.1_1969369_1970389_-	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	NA|168aa|down_7|LR134306.1_1970399_1970903_-	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|453aa|down_8|LR134306.1_1970949_1972308_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|70aa|down_9|LR134306.1_1972431_1972641_+	NA
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	7	2927781-2929610	6,2,4	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Unclear	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	30,30,29	30	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA,NA|72aa|down_1|LR134306.1_2931486_2931702_-,NA|219aa|down_6|LR134306.1_2936803_2937460_+	NA|385aa|up_9|LR134306.1_2913197_2914352_-	PRK11197, lldD, L-lactate dehydrogenase; Provisional	NA|426aa|up_8|LR134306.1_2914648_2915926_-	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA	NA|281aa|up_7|LR134306.1_2915957_2916800_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|247aa|up_6|LR134306.1_2916847_2917588_-	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs	NA|141aa|up_5|LR134306.1_2918015_2918438_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|435aa|up_4|LR134306.1_2918446_2919751_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|1076aa|up_3|LR134306.1_2920791_2924019_+	pfam11924, IAT_beta, Inverse autotransporter, beta-domain	NA|106aa|up_2|LR134306.1_2924162_2924480_-	PRK05423, PRK05423, DUF496 family protein	NA|370aa|up_1|LR134306.1_2924913_2926023_-	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs	DEDDh|477aa|up_0|LR134306.1_2926315_2927746_+	PRK11779, sbcB, exonuclease I; Provisional	NA|464aa|down_0|LR134306.1_2930105_2931497_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|72aa|down_1|LR134306.1_2931486_2931702_-	NA	NA|364aa|down_2|LR134306.1_2931955_2933047_-	PRK10586, PRK10586, putative oxidoreductase; Provisional	NA|514aa|down_3|LR134306.1_2933332_2934874_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|332aa|down_4|LR134306.1_2934870_2935866_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|122aa|down_5|LR134306.1_2936021_2936387_+	pfam16695, Tai4, Type VI secretion system (T6SS), amidase immunity protein	NA|219aa|down_6|LR134306.1_2936803_2937460_+	NA	NA|276aa|down_7|LR134306.1_2937766_2938594_-	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|300aa|down_8|LR134306.1_2939299_2940199_+	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|444aa|down_9|LR134306.1_2940202_2941534_+	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	8	3052880-3053001	7	CRISPRCasFinder	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	CAATTGATTATATCGATTAATATTGGCATTAAG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|107aa|up_0|LR134306.1_3052304_3052625_-,NA|93aa|down_3|LR134306.1_3058170_3058449_-,NA|119aa|down_4|LR134306.1_3058455_3058812_-	NA|83aa|up_9|LR134306.1_3045180_3045429_-	PRK07117, PRK07117, acyl carrier protein; Validated	NA|111aa|up_8|LR134306.1_3045466_3045799_-	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|263aa|up_7|LR134306.1_3045993_3046782_-	cd05233, SDR_c, classical (c) SDRs	NA|251aa|up_6|LR134306.1_3046784_3047537_-	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated	NA|240aa|up_5|LR134306.1_3047538_3048258_-	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|413aa|up_4|LR134306.1_3048250_3049489_-	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|249aa|up_3|LR134306.1_3049504_3050251_-	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|428aa|up_2|LR134306.1_3050243_3051527_-	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|175aa|up_1|LR134306.1_3051516_3052041_-	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|107aa|up_0|LR134306.1_3052304_3052625_-	NA	NA|249aa|down_0|LR134306.1_3053253_3054000_+	PRK06172, PRK06172, SDR family oxidoreductase	NA|806aa|down_1|LR134306.1_3054153_3056571_+	pfam01565, FAD_binding_4, FAD binding domain	NA|493aa|down_2|LR134306.1_3056695_3058174_-	pfam15962, DUF4765, Domain of unknown function (DUF4765)	NA|93aa|down_3|LR134306.1_3058170_3058449_-	NA	NA|119aa|down_4|LR134306.1_3058455_3058812_-	NA	NA|96aa|down_5|LR134306.1_3059181_3059469_-	pfam13610, DDE_Tnp_IS240, DDE domain	NA|110aa|down_6|LR134306.1_3060215_3060545_+	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism]	NA|93aa|down_7|LR134306.1_3060596_3060875_-	PRK14426, PRK14426, acylphosphatase; Provisional	NA|397aa|down_8|LR134306.1_3060968_3062159_+	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|106aa|down_9|LR134306.1_3062219_3062537_+	PRK14129, PRK14129, heat shock protein HspQ; Provisional
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	9	3438699-3439071	5	PILER-CR	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	GCGGTAATTCTTGAGGTAATGGTGGGTCGTGCGGGATTCGAACCTGCGACCAATTGATTAAAAG	64	3	3	3438763-3438801|3438866-3438908|3438973-3439011	LR134306.1_3438660-3438698|LR134306.1_3438660-3438702|LR134306.1_3438660-3438698	NA	3	3	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA|59aa|up_3|LR134306.1_3435061_3435238_-,NA	NA|357aa|up_9|LR134306.1_3429496_3430567_+	PRK11055, galM, galactose-1-epimerase; Provisional	NA|112aa|up_8|LR134306.1_3430859_3431195_+	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|251aa|up_7|LR134306.1_3431541_3432294_+	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|351aa|up_6|LR134306.1_3432475_3433528_-	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|251aa|up_5|LR134306.1_3433843_3434596_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|104aa|up_4|LR134306.1_3434706_3435018_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|59aa|up_3|LR134306.1_3435061_3435238_-	NA	NA|313aa|up_2|LR134306.1_3435289_3436228_+	PRK03557, PRK03557, CDF family zinc transporter ZitB	NA|242aa|up_1|LR134306.1_3436342_3437068_-	PRK15397, PRK15397, nicotinamide riboside transporter PnuC; Provisional	NA|354aa|up_0|LR134306.1_3437189_3438251_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|270aa|down_0|LR134306.1_3439292_3440102_-	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|169aa|down_1|LR134306.1_3440111_3440618_-	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|431aa|down_2|LR134306.1_3440668_3441961_-	PRK03629, tolB, Tol-Pal system protein TolB	NA|394aa|down_3|LR134306.1_3442080_3443262_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|143aa|down_4|LR134306.1_3443358_3443787_-	PRK11024, PRK11024, colicin uptake protein TolR; Provisional	NA|229aa|down_5|LR134306.1_3443799_3444486_-	PRK10801, PRK10801, Tol-Pal system protein TolQ	NA|134aa|down_6|LR134306.1_3444485_3444887_-	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional	NA|100aa|down_7|LR134306.1_3445018_3445318_-	PRK10588, PRK10588, hypothetical protein; Provisional	NA|45aa|down_8|LR134306.1_3445295_3445430_-	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|380aa|down_9|LR134306.1_3445442_3446582_-	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCA_900636705.1_43908_A02	LR134306	Yersinia pseudotuberculosis strain NCTC3571 genome assembly, chromosome: 1	10	3573129-3574055	8,3,6	CRISPRCasFinder,CRT,PILER-CR	no		cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	Orphan	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	15,15,14	15	Orphan	cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,RT,csa3	NA,NA|37aa|down_3|LR134306.1_3583599_3583710_+,NA|286aa|down_4|LR134306.1_3584167_3585025_+,NA|84aa|down_7|LR134306.1_3586026_3586278_-,NA|80aa|down_8|LR134306.1_3586316_3586556_-	NA|327aa|up_9|LR134306.1_3559297_3560278_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|664aa|up_8|LR134306.1_3560298_3562290_-	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|378aa|up_7|LR134306.1_3562316_3563450_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|343aa|up_6|LR134306.1_3563473_3564502_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|516aa|up_5|LR134306.1_3564513_3566061_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|310aa|up_4|LR134306.1_3566109_3567039_-	cd19968, PBP1_ABC_IbpA-like, periplasmic sugar-binding protein IbpA of an ABC transporter and similar proteins	NA|329aa|up_3|LR134306.1_3567146_3568133_-	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|649aa|up_2|LR134306.1_3568426_3570373_-	COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism]	NA|509aa|up_1|LR134306.1_3570386_3571913_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|285aa|up_0|LR134306.1_3572270_3573125_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|1993aa|down_0|LR134306.1_3574638_3580617_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|788aa|down_1|LR134306.1_3580673_3583037_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|82aa|down_2|LR134306.1_3583249_3583495_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|37aa|down_3|LR134306.1_3583599_3583710_+	NA	NA|286aa|down_4|LR134306.1_3584167_3585025_+	NA	NA|147aa|down_5|LR134306.1_3584978_3585419_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|160aa|down_6|LR134306.1_3585523_3586003_-	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|84aa|down_7|LR134306.1_3586026_3586278_-	NA	NA|80aa|down_8|LR134306.1_3586316_3586556_-	NA	NA|639aa|down_9|LR134306.1_3587364_3589281_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain
