assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	2	620185-620266	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATTTCTACAGGCAATGCAAGTTGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|499aa|up_9|LR134305.1_609070_610567_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|114aa|up_8|LR134305.1_610559_610901_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|LR134305.1_610900_611329_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|802aa|up_6|LR134305.1_611321_613727_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|128aa|up_5|LR134305.1_613857_614241_-	pfam08810, KapB, Kinase associated protein B	NA|198aa|up_4|LR134305.1_614304_614898_+	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain	NA|126aa|up_3|LR134305.1_615313_615691_+	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_2|LR134305.1_616051_617179_+	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|397aa|up_1|LR134305.1_617486_618677_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|415aa|up_0|LR134305.1_618785_620030_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|310aa|down_0|LR134305.1_620423_621353_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|460aa|down_1|LR134305.1_621594_622974_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|402aa|down_2|LR134305.1_622963_624169_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|444aa|down_3|LR134305.1_624518_625850_+	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|192aa|down_4|LR134305.1_626721_627297_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|down_5|LR134305.1_627301_627826_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|down_6|LR134305.1_627841_628417_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|down_7|LR134305.1_628576_632053_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|down_8|LR134305.1_632053_635707_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|down_9|LR134305.1_635872_636775_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	4	752393-752489	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG	34	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|45aa|down_0|LR134305.1_752498_752633_-,NA|432aa|down_1|LR134305.1_752784_754080_+	NA|224aa|up_9|LR134305.1_740190_740862_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|LR134305.1_740854_743044_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|LR134305.1_743022_744507_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|LR134305.1_744499_745528_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|LR134305.1_745530_746097_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|LR134305.1_746111_747590_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|LR134305.1_747611_748859_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|LR134305.1_749124_749931_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|LR134305.1_749923_751324_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|LR134305.1_751339_751915_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|LR134305.1_752498_752633_-	NA	NA|432aa|down_1|LR134305.1_752784_754080_+	NA	NA|391aa|down_2|LR134305.1_754503_755676_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|LR134305.1_755729_756272_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|LR134305.1_756425_756692_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|LR134305.1_756694_758413_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|LR134305.1_758647_758881_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|LR134305.1_759078_760440_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|LR134305.1_760436_761456_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|LR134305.1_761588_762251_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	5	1597712-1597794	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAACATAGTGAAATTGGATCCTCA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|132aa|up_0|LR134305.1_1596965_1597361_-,NA|51aa|down_0|LR134305.1_1598103_1598256_-	NA|979aa|up_9|LR134305.1_1584456_1587393_-	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|399aa|up_8|LR134305.1_1587382_1588579_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|115aa|up_7|LR134305.1_1589656_1590001_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|375aa|up_6|LR134305.1_1590069_1591194_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_5|LR134305.1_1591372_1591837_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_4|LR134305.1_1592192_1592816_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|up_3|LR134305.1_1592837_1593950_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|274aa|up_2|LR134305.1_1594112_1594934_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_1|LR134305.1_1595384_1596770_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_0|LR134305.1_1596965_1597361_-	NA	NA|51aa|down_0|LR134305.1_1598103_1598256_-	NA	NA|200aa|down_1|LR134305.1_1598280_1598880_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|down_2|LR134305.1_1599038_1599509_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|down_3|LR134305.1_1599513_1600641_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|243aa|down_4|LR134305.1_1600791_1601520_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|down_5|LR134305.1_1601506_1602964_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|down_6|LR134305.1_1603221_1604283_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_7|LR134305.1_1613153_1613600_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|320aa|down_8|LR134305.1_1613696_1614656_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_9|LR134305.1_1614652_1615108_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	6	1898165-1898254	5	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	TTACAACTTTAGTTGTTAGGGGCTCTTATGCA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|LR134305.1_1893039_1893270_-,NA|364aa|up_0|LR134305.1_1897059_1898151_+,NA|236aa|down_0|LR134305.1_1899450_1900158_-,NA|43aa|down_1|LR134305.1_1900442_1900571_-	NA|237aa|up_9|LR134305.1_1888647_1889358_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|LR134305.1_1889478_1889922_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|LR134305.1_1890121_1890535_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|LR134305.1_1890992_1892366_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|LR134305.1_1893039_1893270_-	NA	NA|313aa|up_4|LR134305.1_1893300_1894239_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|LR134305.1_1894674_1895340_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|LR134305.1_1895491_1895812_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|LR134305.1_1895813_1896794_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|LR134305.1_1897059_1898151_+	NA	NA|236aa|down_0|LR134305.1_1899450_1900158_-	NA	NA|43aa|down_1|LR134305.1_1900442_1900571_-	NA	NA|286aa|down_2|LR134305.1_1901619_1902477_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|LR134305.1_1902544_1903327_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|642aa|down_4|LR134305.1_1903805_1905731_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|668aa|down_5|LR134305.1_1905723_1907727_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|602aa|down_6|LR134305.1_1907878_1909684_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_7|LR134305.1_1910364_1911903_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_8|LR134305.1_1911937_1914070_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_9|LR134305.1_1914081_1914516_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	7	2019468-2019686	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GTTGGGGCCCCGTTCCCCAACTTGCACATTATTGTAAGCTG	41	2	9	2019509-2019526|2019568-2019585|2019568-2019585|2019568-2019585|2019568-2019585|2019568-2019585|2019568-2019585|2019568-2019585|2019568-2019585	LR134305.1_583774-583757|LR134305.1_494696-494679|LR134305.1_836927-836910|LR134305.1_2160834-2160817|LR134305.1_1489042-1489025|LR134305.1_166409-166392|LR134305.1_371545-371562|LR134305.1_1433917-1433900|LR134305.1_1649430-1649447	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_8|LR134305.1_2010003_2010168_+,NA|106aa|up_7|LR134305.1_2010402_2010720_+,NA|84aa|up_4|LR134305.1_2015844_2016096_+,NA	NA|303aa|up_9|LR134305.1_2008962_2009871_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_8|LR134305.1_2010003_2010168_+	NA	NA|106aa|up_7|LR134305.1_2010402_2010720_+	NA	NA|1056aa|up_6|LR134305.1_2010906_2014074_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_5|LR134305.1_2014190_2015456_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_4|LR134305.1_2015844_2016096_+	NA	NA|255aa|up_3|LR134305.1_2016087_2016852_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_2|LR134305.1_2017014_2017455_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_1|LR134305.1_2017447_2018659_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_0|LR134305.1_2018760_2019111_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|341aa|down_0|LR134305.1_2019868_2020891_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|LR134305.1_2020910_2021510_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|LR134305.1_2021516_2021750_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|LR134305.1_2021755_2022202_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|LR134305.1_2022215_2022701_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|LR134305.1_2022697_2023957_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|LR134305.1_2024019_2024514_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|LR134305.1_2024515_2025022_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|LR134305.1_2025052_2026057_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|LR134305.1_2026225_2026831_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	8	2237029-2237124	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAACTGTATTCCTCTATACCTGTAATTTT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|250aa|up_9|LR134305.1_2226715_2227465_+,NA|121aa|down_0|LR134305.1_2237887_2238250_-,NA|64aa|down_7|LR134305.1_2244299_2244491_-,NA|98aa|down_8|LR134305.1_2244844_2245138_-,NA|109aa|down_9|LR134305.1_2245140_2245467_-	NA|250aa|up_9|LR134305.1_2226715_2227465_+	NA	NA|398aa|up_8|LR134305.1_2227688_2228882_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|250aa|up_7|LR134305.1_2228893_2229643_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_6|LR134305.1_2229635_2230451_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|up_5|LR134305.1_2230447_2231317_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|312aa|up_4|LR134305.1_2231313_2232249_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|533aa|up_3|LR134305.1_2232261_2233860_-	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|434aa|up_2|LR134305.1_2234002_2235304_-	COG4408, COG4408, Uncharacterized protein conserved in bacteria [Function unknown]	NA|273aa|up_1|LR134305.1_2235296_2236115_-	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|274aa|up_0|LR134305.1_2236125_2236947_-	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|121aa|down_0|LR134305.1_2237887_2238250_-	NA	NA|273aa|down_1|LR134305.1_2238513_2239332_-	PRK08589, PRK08589, SDR family oxidoreductase	NA|513aa|down_2|LR134305.1_2239566_2241105_+	pfam03806, ABG_transport, AbgT putative transporter family	NA|141aa|down_3|LR134305.1_2241216_2241639_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|140aa|down_4|LR134305.1_2242093_2242513_-	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|232aa|down_5|LR134305.1_2242763_2243459_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|94aa|down_6|LR134305.1_2243758_2244040_+	pfam07205, DUF1413, Domain of unknown function (DUF1413)	NA|64aa|down_7|LR134305.1_2244299_2244491_-	NA	NA|98aa|down_8|LR134305.1_2244844_2245138_-	NA	NA|109aa|down_9|LR134305.1_2245140_2245467_-	NA
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	9	2464228-2464306	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTCTATGTTGGGGCCCCGCCAA	24	1	19	2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282|2464252-2464282	LR134305.1_329759-329729|LR134305.1_527224-527254|LR134305.1_527282-527312|LR134305.1_736190-736220|LR134305.1_736248-736278|LR134305.1_1047777-1047747|LR134305.1_1123163-1123193|LR134305.1_1123221-1123251|LR134305.1_1123278-1123308|LR134305.1_2034994-2034964|LR134305.1_2054130-2054100|LR134305.1_575051-575021|LR134305.1_1324237-1324207|LR134305.1_2493666-2493696|LR134305.1_2493724-2493754|LR134305.1_247584-247554|LR134305.1_640332-640362|LR134305.1_1343809-1343839|LR134305.1_1433938-1433908	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|88aa|down_1|LR134305.1_2467166_2467430_-	NA|159aa|up_9|LR134305.1_2455676_2456153_-	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase	NA|167aa|up_8|LR134305.1_2456155_2456656_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|256aa|up_7|LR134305.1_2456890_2457658_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|231aa|up_6|LR134305.1_2457654_2458347_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|221aa|up_5|LR134305.1_2458363_2459026_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|187aa|up_4|LR134305.1_2459873_2460434_-	pfam18665, TetR_C_37, Tetracyclin repressor-like, C-terminal domain	NA|413aa|up_3|LR134305.1_2460597_2461836_+	TIGR03937, Poly-beta-16-N-acetyl-D-glucosamine_synthase, poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA|102aa|up_2|LR134305.1_2461799_2462105_+	TIGR03932, IcaD_partial, intracellular adhesion protein D	NA|291aa|up_1|LR134305.1_2462101_2462974_+	TIGR03933, Poly-beta-16-N-acetyl-D-glucosamine_N-deacetylase, intercellular adhesin biosynthesis polysaccharide N-deacetylase	NA|351aa|up_0|LR134305.1_2462960_2464013_+	COG3936, COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism]	NA|682aa|down_0|LR134305.1_2464403_2466449_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|88aa|down_1|LR134305.1_2467166_2467430_-	NA	NA|211aa|down_2|LR134305.1_2467966_2468599_-	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA|253aa|down_3|LR134305.1_2468595_2469354_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|235aa|down_4|LR134305.1_2469350_2470055_-	PRK13587, PRK13587, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional	NA|193aa|down_5|LR134305.1_2470047_2470626_-	PRK13142, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|193aa|down_6|LR134305.1_2470622_2471201_-	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|338aa|down_7|LR134305.1_2471169_2472183_-	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]	NA|417aa|down_8|LR134305.1_2472198_2473449_-	PRK13770, PRK13770, histidinol dehydrogenase; Provisional	NA|205aa|down_9|LR134305.1_2473441_2474056_-	PRK13584, hisG, ATP phosphoribosyltransferase
GCA_900636695.1_43874_B01	LR134305	Staphylococcus aureus strain NCTC1803 genome assembly, chromosome: 1	10	2493547-2493632	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	9	2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602|2493577-2493602	LR134305.1_329907-329882|LR134305.1_1324269-1324244|LR134305.1_2054275-2054250|LR134305.1_1853642-1853617|LR134305.1_1343890-1343915|LR134305.1_1343913-1343938|LR134305.1_2054219-2054194|LR134305.1_2160885-2160860|LR134305.1_2190177-2190202	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|64aa|up_3|LR134305.1_2490766_2490958_+,NA	NA|192aa|up_9|LR134305.1_2484138_2484714_+	PRK07758, PRK07758, hypothetical protein; Provisional	NA|339aa|up_8|LR134305.1_2484877_2485894_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|271aa|up_7|LR134305.1_2486136_2486949_+	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_6|LR134305.1_2487244_2487757_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|253aa|up_5|LR134305.1_2488046_2488805_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_4|LR134305.1_2488794_2490675_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_3|LR134305.1_2490766_2490958_+	NA	NA|190aa|up_2|LR134305.1_2491677_2492247_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|LR134305.1_2492506_2492902_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|LR134305.1_2492969_2493323_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|LR134305.1_2493990_2494830_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|LR134305.1_2494872_2495592_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|LR134305.1_2495591_2497469_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|LR134305.1_2497535_2498915_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|116aa|down_4|LR134305.1_2499057_2499405_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|LR134305.1_2499531_2499669_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|454aa|down_6|LR134305.1_2500399_2501761_+	TIGR00362, DnaA, chromosomal replication initiator protein DnaA	NA|378aa|down_7|LR134305.1_2502040_2503174_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|79aa|down_8|LR134305.1_2503563_2503800_+	TIGR02988, YaaA_near_RecF, S4 domain protein YaaA	NA|371aa|down_9|LR134305.1_2503796_2504909_+	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein
