assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636685.1_43874_A01	LR134304	Staphylococcus schweitzeri strain NCTC13712 genome assembly, chromosome: 1	1	60702-60781	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	TTACAATAATGTGCAAGTTGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|161aa|up_9|LR134304.1_50226_50709_+,NA|110aa|up_3|LR134304.1_56096_56426_+,NA|104aa|up_2|LR134304.1_56429_56741_+,NA	NA|161aa|up_9|LR134304.1_50226_50709_+	NA	NA|329aa|up_8|LR134304.1_50915_51902_+	cd08586, PI-PLCc_BcPLC_like, Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins	NA|257aa|up_7|LR134304.1_52122_52893_+	pfam04507, DUF576, Csa1 family	NA|257aa|up_6|LR134304.1_52957_53728_+	pfam04507, DUF576, Csa1 family	NA|231aa|up_5|LR134304.1_54028_54721_+	pfam04507, DUF576, Csa1 family	NA|459aa|up_4|LR134304.1_54723_56100_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|110aa|up_3|LR134304.1_56096_56426_+	NA	NA|104aa|up_2|LR134304.1_56429_56741_+	NA	NA|746aa|up_1|LR134304.1_56993_59231_+	COG3664, XynB, Beta-xylosidase [Carbohydrate transport and metabolism]	NA|393aa|up_0|LR134304.1_59381_60560_+	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085	NA|253aa|down_0|LR134304.1_60898_61657_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|87aa|down_1|LR134304.1_61653_61914_-	cd10155, BsYrkD-like_DUF156, Uncharacterized protein YrkD from Bacillus subtilis and related domains; this domain superfamily was previously known as part of DUF156	NA|353aa|down_2|LR134304.1_62049_63108_+	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family	NA|445aa|down_3|LR134304.1_63137_64472_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|398aa|down_4|LR134304.1_64487_65681_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|556aa|down_5|LR134304.1_66071_67739_-	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|592aa|down_6|LR134304.1_68057_69833_-	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown]	NA|158aa|down_7|LR134304.1_70193_70667_+	pfam07853, DUF1648, Protein of unknown function (DUF1648)	NA|531aa|down_8|LR134304.1_70928_72521_+	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|516aa|down_9|LR134304.1_72824_74372_-	pfam02216, B, B domain
GCA_900636685.1_43874_A01	LR134304	Staphylococcus schweitzeri strain NCTC13712 genome assembly, chromosome: 1	2	302109-302192	2	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	TGTTGAGGCCCACACCCCAACTCGCA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA	NA|228aa|up_9|LR134304.1_293554_294238_+	pfam16882, DUF5079, Domain of unknown function (DUF5079)	NA|167aa|up_8|LR134304.1_294809_295310_+	TIGR01741, staph_tand_hypo, conserved hypothetical protein	NA|161aa|up_7|LR134304.1_295320_295803_+	TIGR01741, staph_tand_hypo, conserved hypothetical protein	NA|167aa|up_6|LR134304.1_295831_296332_+	TIGR01741, staph_tand_hypo, conserved hypothetical protein	NA|163aa|up_5|LR134304.1_296342_296831_+	TIGR01741, staph_tand_hypo, conserved hypothetical protein	NA|125aa|up_4|LR134304.1_297465_297840_+	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|133aa|up_3|LR134304.1_297989_298388_+	pfam13273, DUF4064, Protein of unknown function (DUF4064)	NA|275aa|up_2|LR134304.1_298635_299460_-	COG2116, FocA, Formate/nitrite family of transporters [Inorganic ion transport and metabolism]	NA|436aa|up_1|LR134304.1_299697_301005_-	COG1114, BrnQ, Branched-chain amino acid permeases [Amino acid transport and metabolism]	NA|175aa|up_0|LR134304.1_301279_301804_+	PRK13291, PRK13291, putative metal-dependent hydrolase	NA|297aa|down_0|LR134304.1_302476_303367_+	TIGR01533, Lipoprotein_E, 5'-nucleotidase, lipoprotein e(P4) family	NA|350aa|down_1|LR134304.1_303601_304651_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|226aa|down_2|LR134304.1_304663_305341_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|344aa|down_3|LR134304.1_305546_306578_+	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|373aa|down_4|LR134304.1_306919_308038_+	cd01941, YeiC_kinase_like, YeiC-like sugar kinase	NA|308aa|down_5|LR134304.1_308012_308936_+	pfam04227, Indigoidine_A, Indigoidine synthase A like protein	NA|407aa|down_6|LR134304.1_308946_310167_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|511aa|down_7|LR134304.1_310315_311848_-	cd11495, SLC5sbd_NIS-like_u3, uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain	NA|294aa|down_8|LR134304.1_311887_312769_-	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|287aa|down_9|LR134304.1_312926_313787_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
GCA_900636685.1_43874_A01	LR134304	Staphylococcus schweitzeri strain NCTC13712 genome assembly, chromosome: 1	3	1028087-1028172	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	TAGAAATTGGGAACCCAATTTCTCT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|39aa|up_7|LR134304.1_1020892_1021009_-,NA	NA|119aa|up_9|LR134304.1_1019069_1019426_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|324aa|up_8|LR134304.1_1019890_1020862_+	COG4594, FecB, ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|39aa|up_7|LR134304.1_1020892_1021009_-	NA	NA|71aa|up_6|LR134304.1_1021089_1021302_-	COG2314, XynA, Predicted membrane protein [Function unknown]	NA|186aa|up_5|LR134304.1_1021460_1022018_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|313aa|up_4|LR134304.1_1022068_1023007_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|454aa|up_3|LR134304.1_1023188_1024550_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|558aa|up_2|LR134304.1_1024536_1026210_+	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|268aa|up_1|LR134304.1_1026196_1027000_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|274aa|up_0|LR134304.1_1026992_1027814_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|110aa|down_0|LR134304.1_1028588_1028918_-	pfam09023, Staphostatin_B, Staphostatin B	NA|398aa|down_1|LR134304.1_1028955_1030149_-	pfam05543, Peptidase_C47, Staphopain peptidase C47	NA|298aa|down_2|LR134304.1_1030231_1031125_-	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]	NA|385aa|down_3|LR134304.1_1031657_1032812_-	PRK07683, PRK07683, aminotransferase A; Validated	NA|337aa|down_4|LR134304.1_1033007_1034018_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|140aa|down_5|LR134304.1_1034170_1034590_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|1249aa|down_6|LR134304.1_1035016_1038763_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|146aa|down_7|LR134304.1_1038989_1039427_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|157aa|down_8|LR134304.1_1039578_1040049_-	pfam10804, DUF2538, Protein of unknown function (DUF2538)	NA|402aa|down_9|LR134304.1_1040103_1041309_-	COG1316, LytR, Transcriptional regulator [Transcription]
GCA_900636685.1_43874_A01	LR134304	Staphylococcus schweitzeri strain NCTC13712 genome assembly, chromosome: 1	4	1776927-1777069	4	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	TCTGTGTTGGGGCCCACACCCCAACT	26	2	15	1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1776953-1776985|1777012-1777043|1777012-1777043|1777012-1777043	LR134304.1_744437-744405|LR134304.1_1872201-1872169|LR134304.1_2105524-2105556|LR134304.1_2105583-2105615|LR134304.1_2283090-2283122|LR134304.1_2698068-2698100|LR134304.1_2327847-2327815|LR134304.1_60716-60684|LR134304.1_148292-148324|LR134304.1_2105412-2105444|LR134304.1_2105468-2105500|LR134304.1_2282977-2283009|LR134304.1_1232712-1232743|LR134304.1_1210360-1210329|LR134304.1_2694294-2694263	NA	2	2	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA	NA|555aa|up_9|LR134304.1_1763155_1764820_-	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|234aa|up_8|LR134304.1_1764819_1765521_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|423aa|up_7|LR134304.1_1765752_1767021_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|374aa|up_6|LR134304.1_1767066_1768188_-	PRK14035, PRK14035, citrate synthase; Provisional	NA|454aa|up_5|LR134304.1_1768535_1769897_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_4|LR134304.1_1770329_1772087_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_3|LR134304.1_1772108_1773077_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_2|LR134304.1_1773367_1774312_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_1|LR134304.1_1774311_1775169_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_0|LR134304.1_1775355_1776585_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|down_0|LR134304.1_1777386_1780584_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|down_1|LR134304.1_1780604_1781546_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|down_2|LR134304.1_1781731_1783030_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|down_3|LR134304.1_1783233_1783647_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_4|LR134304.1_1783905_1784595_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_5|LR134304.1_1784769_1785825_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|272aa|down_6|LR134304.1_1786031_1786847_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|100aa|down_7|LR134304.1_1786850_1787150_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_8|LR134304.1_1787290_1787791_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_9|LR134304.1_1788078_1789281_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed
