The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	1222032	1229594	4592627		Stenotrophomonas_phage(85.71%)	12	NA	NA
VEE51533.1|1222032_1222317_+	Uncharacterised protein	NA	S0F3S0	Stenotrophomonas_phage	67.9	9.8e-20
VEE51534.1|1222309_1222504_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE51535.1|1222493_1222628_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE51536.1|1222617_1223673_+	phage replication protein NMA0782	NA	S0F3F7	Stenotrophomonas_phage	99.1	5.2e-207
VEE51537.1|1223654_1223933_+	Helix-destabilising protein	NA	S0F2M9	Stenotrophomonas_phage	85.7	7.1e-39
VEE51538.1|1223936_1224188_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE51539.1|1224223_1224364_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE51540.1|1224423_1224573_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE51541.1|1224787_1225618_+	Uncharacterised protein	NA	Q4LAU2	Stenotrophomonas_phage	65.0	5.8e-28
VEE51542.1|1225614_1225962_+	Uncharacterised protein	NA	Q4LAU3	Stenotrophomonas_phage	45.2	2.3e-26
VEE51543.1|1225963_1227283_+	Zona occludens toxin	NA	Q4LAU4	Stenotrophomonas_phage	65.2	2.1e-157
VEE51544.1|1228475_1229594_+	histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	38.3	3.9e-59
>prophage 2
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	1861149	1874257	4592627		Pseudomonas_phage(20.0%)	27	NA	NA
VEE52117.1|1861149_1862517_-	phage protein	NA	A0A0U1SZM0	Pseudomonas_phage	44.4	4.6e-46
VEE52118.1|1862513_1863005_-	Uncharacterised protein	NA	Q5ZGG3	Flavobacterium_phage	32.7	6.7e-08
VEE52119.1|1862988_1863243_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52120.1|1863239_1863446_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52121.1|1863609_1864050_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52122.1|1864085_1864529_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52123.1|1864525_1864891_-	Endodeoxyribonuclease RusA	NA	NA	NA	NA	NA
VEE52124.1|1864887_1865169_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52125.1|1865165_1865633_-	NinB family protein	NA	Q8VNP6	Enterobacteria_phage	36.6	3.0e-13
VEE52126.1|1865629_1865833_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52127.1|1865829_1866192_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52128.1|1866188_1866428_-	Uncharacterised protein	NA	A0A2R3UAK0	Myoviridae_environmental_samples	36.7	2.6e-05
VEE52129.1|1866424_1866604_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52130.1|1866603_1867875_-	DnaB domain-containing protein helicase domain-containing protein	NA	A0A2R3UA46	Siphoviridae_environmental_samples	67.4	5.0e-164
VEE52131.1|1867871_1868606_-	Uncharacterised protein	NA	V5URT9	Shigella_phage	37.2	1.5e-11
VEE52132.1|1868624_1869131_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52133.1|1869382_1869613_-	CI repressor	NA	W6MWX8	Pseudomonas_phage	54.7	4.2e-05
VEE52134.1|1869695_1870391_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	C8CLH0	Xylella_phage	27.0	7.8e-10
VEE52135.1|1870366_1870834_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52136.1|1871010_1871316_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52137.1|1871312_1871429_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52138.1|1871437_1871695_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52139.1|1871681_1871834_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52140.1|1871826_1872135_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52141.1|1872131_1872281_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52142.1|1872353_1873259_+	DNA recombination-dependent growth factor C	NA	S4TWL4	Salmonella_phage	32.1	1.9e-40
VEE52143.1|1873336_1874257_+	P33	NA	F1C5B8	Cronobacter_phage	52.4	1.4e-62
>prophage 3
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	1901755	1922998	4592627	terminase,capsid	Stenotrophomonas_phage(100.0%)	18	NA	NA
VEE52183.1|1901755_1905361_-	Uncharacterised protein	NA	B7SYE9	Stenotrophomonas_phage	80.1	0.0e+00
VEE52184.1|1905364_1905781_-	Uncharacterised protein	NA	B7SYE8	Stenotrophomonas_phage	87.7	2.5e-64
VEE52185.1|1905780_1909530_-	Uncharacterised protein	NA	B7SYE7	Stenotrophomonas_phage	79.6	0.0e+00
VEE52186.1|1909522_1910173_-	Uncharacterised protein	NA	B7SYE6	Stenotrophomonas_phage	94.4	9.2e-114
VEE52187.1|1910244_1911045_-	Uncharacterised protein	NA	B7SYE5	Stenotrophomonas_phage	88.0	3.5e-131
VEE52188.1|1911058_1911541_-	Uncharacterised protein	NA	B7SYE4	Stenotrophomonas_phage	70.5	5.3e-50
VEE52189.1|1911533_1911869_-	Uncharacterised protein	NA	B7SYE3	Stenotrophomonas_phage	67.0	9.2e-33
VEE52190.1|1911912_1912116_-	Uncharacterised protein	NA	B7SYE2	Stenotrophomonas_phage	83.6	4.4e-22
VEE52191.1|1912353_1912695_-	Uncharacterised protein	NA	B7SYE0	Stenotrophomonas_phage	53.6	1.4e-25
VEE52192.1|1912694_1913126_-|capsid	phage capsid and scaffold	capsid	B7SYD9	Stenotrophomonas_phage	93.0	4.9e-71
VEE52193.1|1913206_1913572_-	RecA/RadA recombinase	NA	B7SYD8	Stenotrophomonas_phage	89.3	7.4e-52
VEE52194.1|1913594_1915571_-	peptidase S14, ClpP	NA	B7SYD7	Stenotrophomonas_phage	99.2	0.0e+00
VEE52195.1|1915573_1917064_-|capsid	phage capsid and scaffold	capsid	B7SYD6	Stenotrophomonas_phage	99.0	6.7e-285
VEE52196.1|1917065_1917281_-	Uncharacterised protein	NA	B7SYD5	Stenotrophomonas_phage	98.6	3.6e-30
VEE52197.1|1917360_1917678_-	Uncharacterised protein	NA	B7SYD4	Stenotrophomonas_phage	95.2	5.6e-48
VEE52198.1|1917674_1919600_-|terminase	phage terminase, large subunit	terminase	B7SYD3	Stenotrophomonas_phage	97.5	0.0e+00
VEE52199.1|1919596_1920241_-	Uncharacterised protein	NA	B7SYD2	Stenotrophomonas_phage	97.2	1.4e-93
VEE52200.1|1920583_1922998_-	primase domain-containing protein	NA	B7SYD0	Stenotrophomonas_phage	96.9	0.0e+00
>prophage 4
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	1927636	1933682	4592627		Stenotrophomonas_phage(66.67%)	8	NA	NA
VEE52212.1|1927636_1927876_+	Uncharacterised protein	NA	B7SYG8	Stenotrophomonas_phage	84.8	7.0e-35
VEE52213.1|1927872_1928361_+	Uncharacterised protein	NA	B7SYG7	Stenotrophomonas_phage	91.4	5.5e-79
VEE52214.1|1928368_1928761_+	Uncharacterised protein	NA	B7SYG6	Stenotrophomonas_phage	68.0	2.0e-42
VEE52215.1|1928757_1929456_+	Uncharacterised protein	NA	B7SYG5	Stenotrophomonas_phage	82.2	3.4e-106
VEE52216.1|1929448_1931485_+	Site-specific DNA methylase-like	NA	Q5QF27	Pseudomonas_virus	54.3	1.2e-178
VEE52217.1|1931474_1932242_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52218.1|1932297_1932579_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52219.1|1932566_1933682_-	site-specific tyrosine recombinase XerC	NA	A0A1L7DQ84	Ralstonia_phage	30.2	1.5e-23
>prophage 5
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	2517645	2535719	4592627	tail,integrase,plate	Enterobacter_phage(31.25%)	22	2508575:2508591	2523328:2523344
2508575:2508591	attL	GCAGGCATCGCGCGCTG	NA	NA	NA	NA
VEE52752.1|2517645_2519982_+|integrase	phage integrase	integrase	A0A088FVF8	Escherichia_phage	43.7	8.7e-138
VEE52753.1|2520138_2520366_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52754.1|2520406_2521045_+	phage-like protein	NA	A0A1V0DYI4	Shewanella_phage	40.9	2.0e-20
VEE52755.1|2521199_2521583_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52756.1|2521918_2522368_+	Mor transcription activator family	NA	NA	NA	NA	NA
VEE52757.1|2522364_2522715_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52758.1|2522711_2523197_+	endolysin/phage lysozyme	NA	D5LH07	Escherichia_phage	54.4	4.6e-41
VEE52759.1|2523193_2523571_+	Uncharacterised protein	NA	NA	NA	NA	NA
2523328:2523344	attR	GCAGGCATCGCGCGCTG	NA	NA	NA	NA
VEE52760.1|2523940_2524495_+	phage-like protein	NA	A0A219Y9U4	Aeromonas_phage	27.7	5.8e-08
VEE52761.1|2524491_2525082_+|plate	baseplate assembly protein	plate	A0A193GYL5	Enterobacter_phage	39.8	6.6e-26
VEE52762.1|2525134_2525473_+|plate	phage baseplate assembly protein	plate	A0A193GYY8	Enterobacter_phage	62.2	7.8e-32
VEE52763.1|2525475_2526372_+|plate	phage baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	56.5	1.7e-81
VEE52764.1|2526364_2527144_+|tail	bacteriophage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	48.0	7.1e-44
VEE52765.1|2527151_2528621_+|tail	phage tail protein	tail	V9IQX0	Stenotrophomonas_phage	60.2	8.6e-75
VEE52766.1|2528631_2529210_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE52767.1|2529317_2530517_+|tail	bacteriophage major tail sheath protein	tail	D5LGY7	Escherichia_phage	53.1	5.7e-125
VEE52768.1|2530519_2531023_+|tail	major tail tube protein	tail	A0A193GYM4	Enterobacter_phage	51.2	1.4e-40
VEE52769.1|2531103_2531394_+	Uncharacterised protein	NA	A0A193GYZ8	Enterobacter_phage	58.5	1.5e-18
VEE52770.1|2531514_2533986_+|tail	phage tail tape measure protein, TP901 family	tail	K4ICR4	Acidithiobacillus_phage	25.0	3.5e-20
VEE52771.1|2533988_2534456_+	P2 GpU family protein	NA	A4PE53	Ralstonia_virus	30.4	4.4e-09
VEE52772.1|2534439_2534655_+|tail	phage tail protein	tail	A0A193GYC8	Enterobacter_phage	54.3	2.3e-13
VEE52773.1|2534645_2535719_+	late control D family protein	NA	D5LGY1	Escherichia_phage	50.7	5.6e-92
>prophage 6
LR134301	Stenotrophomonas maltophilia strain NCTC13014 genome assembly, chromosome: 1	4592627	2956175	2966615	4592627		Enterobacteria_phage(42.86%)	8	NA	NA
VEE53145.1|2956175_2958800_+	Non-specific serine/threonine protein kinase	NA	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	29.8	3.6e-47
VEE53146.1|2958896_2960243_+	phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.7	1.3e-29
VEE53147.1|2960255_2961659_+	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	29.2	8.6e-48
VEE53148.1|2961711_2963127_-	transmembrane protein	NA	NA	NA	NA	NA
VEE53149.1|2963199_2964105_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.8	7.5e-29
VEE53150.1|2964101_2964659_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.1	1.2e-45
VEE53151.1|2964655_2965543_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.5	2.8e-97
VEE53152.1|2965559_2966615_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.2	1.9e-79
