The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	27193	39811	4162813	transposase	Escherichia_phage(50.0%)	14	NA	NA
VEE00873.1|27193_27511_+|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	53.7	7.6e-29
VEE00874.1|27655_27790_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE00875.1|28120_28510_-	thioesterase	NA	NA	NA	NA	NA
VEE00876.1|28587_29952_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE00877.1|30645_31506_+	reverse transcriptase	NA	A0A0U4J920	Pseudomonas_phage	50.9	1.9e-74
VEE00878.1|32420_33401_-	kinase	NA	NA	NA	NA	NA
VEE00879.1|33662_36263_+	Helicase	NA	A0A1V0SDF7	Indivirus	29.1	6.7e-38
VEE00880.1|36225_37062_+	Transposase and inactivated derivatives	NA	NA	NA	NA	NA
VEE00881.1|37058_37313_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE00882.1|37365_38286_-	transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat)	NA	NA	NA	NA	NA
VEE00883.1|38296_38614_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00884.1|38673_38937_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00885.1|39214_39532_+|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	53.7	3.8e-28
VEE00886.1|39676_39811_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	77662	117766	4162813	transposase,protease,integrase	Escherichia_phage(33.33%)	43	69747:69762	113897:113912
69747:69762	attL	TTTTGTGGATTAACAC	NA	NA	NA	NA
VEE00922.1|77662_78415_+|protease	protease	protease	NA	NA	NA	NA
VEE00923.1|78464_79418_-	eukaryotic small stress protein	NA	NA	NA	NA	NA
VEE00924.1|79544_80153_+	deoxycytidine triphosphate deaminase	NA	S5VM63	Pseudomonas_phage	75.4	1.1e-71
VEE00925.1|80302_80632_-	integration host factor subunit beta	NA	NA	NA	NA	NA
VEE00926.1|80730_81447_-	putative methyltransferases	NA	NA	NA	NA	NA
VEE00927.1|81792_82323_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00928.1|82322_82817_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00929.1|82873_83824_-	cystathionine beta-synthase	NA	A0A1X9I5F1	Streptococcus_phage	45.0	4.7e-66
VEE00930.1|83980_84496_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00931.1|84737_86156_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00932.1|86643_86904_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00933.1|86986_88378_-	fumarate hydratase	NA	NA	NA	NA	NA
VEE00934.1|88507_89236_+	16S rRNA methyltransferase	NA	NA	NA	NA	NA
VEE00935.1|89275_89602_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	56.8	7.1e-22
VEE00936.1|89779_91042_+	transcription termination factor Rho	NA	NA	NA	NA	NA
VEE00937.1|91376_92846_+	3-polyprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA	NA
VEE00938.1|92842_93544_+	NAD(P)H-flavin reductase	NA	NA	NA	NA	NA
VEE00939.1|93581_93776_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00940.1|94106_96560_+	ankyrin repeat protein	NA	NA	NA	NA	NA
VEE00941.1|96709_97255_-	transcription elongation factor	NA	NA	NA	NA	NA
VEE00942.1|97398_98289_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00943.1|98490_100533_-	regulatory protein (GGDEF, PAS, PAC domains)	NA	NA	NA	NA	NA
VEE00944.1|100701_101013_-	putative DNA-binding protein hemimethylated	NA	NA	NA	NA	NA
VEE00945.1|101189_101348_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00946.1|101334_102183_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00947.1|102442_103252_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00948.1|103511_104639_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00949.1|105180_105372_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00950.1|105482_105734_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00951.1|105929_106181_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEE00952.1|106836_107046_+	DNA-binding transcriptional repressor	NA	A0A1X9IGI9	Lactococcus_phage	62.3	1.8e-15
VEE00953.1|107111_107825_-	hemolysin, inner membrane subunit	NA	NA	NA	NA	NA
VEE00954.1|108000_108219_-	RNA-binding protein	NA	NA	NA	NA	NA
VEE00955.1|108858_109089_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE00956.1|109394_109613_-	cytidine/deoxycytidylate deaminase	NA	NA	NA	NA	NA
VEE00957.1|109672_110461_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00958.1|111320_112031_+|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	57.6	1.8e-70
VEE00959.1|112605_113481_-|integrase	integrase	integrase	NA	NA	NA	NA
VEE00960.1|113623_114988_+|transposase	transposase	transposase	NA	NA	NA	NA
113897:113912	attR	TTTTGTGGATTAACAC	NA	NA	NA	NA
VEE00961.1|115197_115992_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
VEE00962.1|116079_116601_+	RNA polymerase factor sigma-70	NA	NA	NA	NA	NA
VEE00963.1|116890_117040_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE00964.1|117469_117766_+|transposase	transposase, ISSod13	transposase	A0A077SLK2	Escherichia_phage	69.6	3.4e-15
>prophage 3
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	1450807	1528977	4162813	transposase,protease,tRNA,integrase	Tupanvirus(25.0%)	58	1509554:1509571	1529402:1529419
VEE02091.1|1450807_1451458_+|protease	glycoprotease	protease	NA	NA	NA	NA
VEE02092.1|1451467_1451659_+	tetraacyldisaccharide-1-P-4'-kinase	NA	NA	NA	NA	NA
VEE02093.1|1451937_1452486_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE02094.1|1452646_1454047_-	amino acid antiporter	NA	NA	NA	NA	NA
VEE02095.1|1454377_1454701_-	regulator of penicillin binding proteins and beta lactamase transcription (morphogene)	NA	NA	NA	NA	NA
VEE02096.1|1454782_1455217_-	Tfp pilus assembly protein, major type IV pilin class A	NA	NA	NA	NA	NA
VEE02097.1|1455509_1456754_-	PPi dependent phosphofructokinase	NA	NA	NA	NA	NA
VEE02098.1|1456794_1459527_-	Legionella transmission sensor LetS	NA	A0A1V0SGX0	Hokovirus	31.6	3.5e-53
VEE02099.1|1459658_1461074_+|tRNA	glutamyl-tRNA synthetase, catalytic subunit	tRNA	NA	NA	NA	NA
VEE02100.1|1461070_1462345_+	D-alanyl-D-alanine carboxypeptidase	NA	Q19XB5	Mycobacterium_phage	24.4	1.3e-13
VEE02101.1|1462484_1463468_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02102.1|1463526_1464129_+	glutathione S-transferase	NA	NA	NA	NA	NA
VEE02103.1|1464204_1465947_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02104.1|1466098_1467703_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02105.1|1467957_1468614_-	OmpA-like transmembrane domain	NA	NA	NA	NA	NA
VEE02106.1|1468704_1469064_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02107.1|1469174_1471421_-	Putative membrane protein ydgH	NA	NA	NA	NA	NA
VEE02108.1|1471494_1472031_+	transporting ATPase	NA	NA	NA	NA	NA
VEE02109.1|1472343_1473477_-	ectonucleoside triphosphate diphosphohydrolase	NA	NA	NA	NA	NA
VEE02110.1|1473774_1474689_+	transporter	NA	NA	NA	NA	NA
VEE02111.1|1474939_1476130_-	cupin	NA	NA	NA	NA	NA
VEE02112.1|1476086_1476272_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02113.1|1476279_1478073_-	potassium:proton antiporter	NA	NA	NA	NA	NA
VEE02114.1|1478088_1478568_-	putative SEC-C motif domain protein	NA	NA	NA	NA	NA
VEE02115.1|1478672_1479545_+	Protein of uncharacterised function (DUF2843)	NA	NA	NA	NA	NA
VEE02116.1|1480159_1482412_-	regulatory protein (GGDEF domain)	NA	G3MA91	Bacillus_virus	37.3	5.8e-22
VEE02117.1|1482404_1483823_-	Two-component sensor histidine kinase	NA	A0A2K9L4R6	Tupanvirus	29.8	6.9e-05
VEE02118.1|1483830_1484991_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEE02119.1|1485182_1486418_+	multidrug efflux system, subunit A	NA	NA	NA	NA	NA
VEE02120.1|1486419_1489650_+	multidrug efflux system, subunit B	NA	S5VTK5	Leptospira_phage	21.8	3.3e-63
VEE02121.1|1489646_1492745_+	multidrug efflux system, subunit C	NA	S5VTK5	Leptospira_phage	22.9	1.9e-68
VEE02122.1|1492731_1494342_+	outer membrane efflux protein	NA	NA	NA	NA	NA
VEE02123.1|1494489_1495008_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02124.1|1495078_1495942_+	substrate of the Dot/Icm secretion system	NA	NA	NA	NA	NA
VEE02125.1|1496114_1496537_+	6,7-dimethyl-8-ribityllumazine synthase	NA	NA	NA	NA	NA
VEE02126.1|1496540_1496969_+	6,7-dimethyl-8-ribityllumazine synthase	NA	NA	NA	NA	NA
VEE02127.1|1496986_1497751_+	Mlc titration factor A	NA	NA	NA	NA	NA
VEE02128.1|1497754_1498186_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02129.1|1498222_1498942_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEE02130.1|1499134_1507948_-	coiled-coil protein	NA	NA	NA	NA	NA
VEE02131.1|1508314_1508926_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02132.1|1508912_1509209_-	coiled-coil protein	NA	NA	NA	NA	NA
1509554:1509571	attL	TAGCTCAGCTGGGAGAGC	NA	NA	NA	NA
VEE02133.1|1509932_1511258_-	dGTP triphosphohydrolase	NA	NA	NA	NA	NA
VEE02134.1|1511443_1511962_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02135.1|1512000_1512159_+	Small integral membrane protein	NA	NA	NA	NA	NA
VEE02136.1|1512181_1512664_-	general secretion pathway protein	NA	NA	NA	NA	NA
VEE02137.1|1512660_1513797_-	general secretion pathway protein L	NA	NA	NA	NA	NA
VEE02138.1|1513799_1514822_-	membrane-bound lytic murein transglycosylase B	NA	NA	NA	NA	NA
VEE02139.1|1514945_1516751_+	Membrane GTPase LepA	NA	A0A2K9L2P9	Tupanvirus	43.7	7.9e-22
VEE02140.1|1516775_1517531_+	Signal peptidase I	NA	NA	NA	NA	NA
VEE02141.1|1517603_1517996_+	transmembrane protein	NA	NA	NA	NA	NA
VEE02142.1|1517985_1518669_+	ribonuclease III	NA	A0A0P0BX11	Ostreococcus_lucimarinus_virus	34.9	5.3e-27
VEE02143.1|1518714_1520565_-	fused transporter subunits of ABC superfamily: ATP-binding components	NA	A0A2K9L3Z8	Tupanvirus	32.8	1.2e-70
VEE02144.1|1520761_1521985_-|integrase	site specific recombinase, phage integrase family	integrase	NA	NA	NA	NA
VEE02145.1|1522708_1524049_+	peptidyl-prolyl cis-trans isomerase (trigger factor)	NA	NA	NA	NA	NA
VEE02146.1|1524053_1524692_+|protease	Protease subunit of ATP-dependent Clp protease	protease	A0A223W000	Agrobacterium_phage	58.5	7.8e-57
VEE02147.1|1525087_1526362_+|protease	ATP-dependent Clp protease, ATP binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.2	4.6e-133
VEE02148.1|1526535_1528977_+|protease	ATP-dependent protease La	protease	A0A0R6PGP8	Moraxella_phage	49.2	5.4e-207
1529402:1529419	attR	TAGCTCAGCTGGGAGAGC	NA	NA	NA	NA
>prophage 4
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	2134533	2262388	4162813	integrase,protease,transposase,holin	Escherichia_phage(26.32%)	115	2133467:2133485	2274001:2274016
2133467:2133485	attL	TTCCATTATTTTTTGAATT	NA	NA	NA	NA
VEE02674.1|2134533_2135295_+|holin	phosphatidylcholine synthase	holin	NA	NA	NA	NA
2133467:2133485	attL	TTCCATTATTTTTTGAATT	NA	NA	NA	NA
VEE02675.1|2135373_2135862_+	Enhanced entry protein EnhB	NA	NA	NA	NA	NA
VEE02676.1|2135865_2136354_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02677.1|2136620_2137070_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
VEE02678.1|2137082_2137952_-	transmembrane protein	NA	NA	NA	NA	NA
VEE02679.1|2137999_2138227_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
VEE02680.1|2138241_2138580_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
VEE02681.1|2138861_2139059_+	carbon storage regulator CsrA	NA	NA	NA	NA	NA
VEE02682.1|2139066_2139978_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02683.1|2140020_2140908_-	putative ErfK/YbiS/YcfS/YnhG family protein precursor	NA	NA	NA	NA	NA
VEE02684.1|2141024_2143043_-	enoyl CoA hydratase	NA	NA	NA	NA	NA
VEE02685.1|2143035_2144355_-	beta-ketoacyl-CoA thiolase	NA	NA	NA	NA	NA
VEE02686.1|2144765_2145731_-	DNA repair protein	NA	NA	NA	NA	NA
VEE02687.1|2146142_2147138_-|integrase	Prophage integrase	integrase	K4PAZ9	Burkholderia_phage	44.4	3.2e-81
VEE02688.1|2147863_2148175_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02689.1|2148984_2149713_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02690.1|2149826_2151755_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02691.1|2152388_2152586_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02692.1|2153006_2158832_-	TraI	NA	NA	NA	NA	NA
VEE02693.1|2158851_2160696_-	protein TraD	NA	NA	NA	NA	NA
VEE02694.1|2160756_2161203_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02695.1|2161262_2161679_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02696.1|2161867_2164570_-	protein TraG	NA	NA	NA	NA	NA
VEE02697.1|2164577_2165951_-	protein TraH	NA	NA	NA	NA	NA
VEE02698.1|2165954_2166365_-	sex pilus assembly TraF, thiol-disulfide isomerase and thioredoxins	NA	NA	NA	NA	NA
VEE02699.1|2166354_2167116_-	pilus assembly protein TraF	NA	NA	NA	NA	NA
VEE02700.1|2167108_2168905_-	protein TraN	NA	NA	NA	NA	NA
VEE02701.1|2168908_2169445_-	putative conjugative transfer protein TrbC	NA	NA	NA	NA	NA
VEE02702.1|2169457_2170435_-	protein TraU	NA	NA	NA	NA	NA
VEE02703.1|2170431_2171040_-	protein TraW	NA	NA	NA	NA	NA
VEE02704.1|2171043_2171373_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA	NA
VEE02705.1|2171356_2173891_-	protein TraC	NA	NA	NA	NA	NA
VEE02706.1|2173895_2174174_-	conjugative transfer: assembly	NA	NA	NA	NA	NA
VEE02707.1|2174185_2175427_-	putative conjugative transfer protein TraB	NA	NA	NA	NA	NA
VEE02708.1|2175416_2176136_-	putative conjugative transfer protein TraK	NA	NA	NA	NA	NA
VEE02709.1|2176132_2176702_-	putative conjugative transfer protein TraE	NA	NA	NA	NA	NA
VEE02710.1|2176705_2176999_-	putative sex pilus assembly protein-like protein	NA	NA	NA	NA	NA
VEE02711.1|2176998_2177304_-	putative fimbrial protein precursor-like protein	NA	NA	NA	NA	NA
VEE02712.1|2177361_2177556_-	pleiotropic regulatory protein for carbon source metabolism (modular protein)	NA	J7I430	Pseudomonas_phage	54.9	3.8e-07
VEE02713.1|2177918_2178806_-	Legionella vir region protein	NA	NA	NA	NA	NA
VEE02714.1|2178913_2179639_+	phage repressor	NA	NA	NA	NA	NA
VEE02715.1|2180482_2183800_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02716.1|2183864_2183981_-	Uncharacterised protein	NA	NA	NA	NA	NA
2183927:2183945	attR	TTCCATTATTTTTTGAATT	NA	NA	NA	NA
VEE02717.1|2183989_2185183_-	transporter of the major facilitator superfamily (MFS)	NA	NA	NA	NA	NA
2183927:2183945	attR	TTCCATTATTTTTTGAATT	NA	NA	NA	NA
VEE02718.1|2185219_2187442_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02719.1|2187425_2188397_-	Malate dehydrogenase	NA	NA	NA	NA	NA
VEE02720.1|2188396_2189470_-	Cupin domain	NA	NA	NA	NA	NA
VEE02721.1|2190374_2190617_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02722.1|2190778_2192260_-	proton/peptide symporter family protein	NA	A0A0P0IY73	Acinetobacter_phage	25.7	1.4e-24
VEE02723.1|2192390_2193689_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02724.1|2193656_2194457_-	methylase	NA	NA	NA	NA	NA
VEE02725.1|2194459_2194612_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02726.1|2194629_2195211_+|transposase	transposase	transposase	A0A1V0E8E1	Vibrio_phage	33.3	4.1e-20
VEE02727.1|2195441_2195561_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE02728.1|2196442_2196985_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02729.1|2197530_2197833_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEE02730.1|2197825_2198215_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEE02731.1|2198414_2199422_-	Protein of uncharacterised function (DUF2971)	NA	NA	NA	NA	NA
VEE02732.1|2199510_2199741_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE02733.1|2200179_2200521_-|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	61.2	6.7e-23
VEE02734.1|2200681_2200894_-|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	62.3	8.1e-19
VEE02735.1|2200915_2201080_-	putative sodium/hydrogen exchanger family protein	NA	NA	NA	NA	NA
VEE02736.1|2201076_2203836_-	cation efflux transporter	NA	M1HLC0	Paramecium_bursaria_Chlorella_virus	27.6	1.2e-66
VEE02737.1|2203852_2204791_-	Universal stress protein E	NA	NA	NA	NA	NA
VEE02738.1|2204868_2205609_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA	NA
VEE02739.1|2205661_2206816_-	sodium-proton antiporter	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	46.6	2.2e-78
VEE02740.1|2207008_2207752_+	putative amino acid ABC transporter, periplasmic binding protein	NA	NA	NA	NA	NA
VEE02741.1|2208170_2208854_+	Enhanced entry protein EnhA homolog	NA	NA	NA	NA	NA
VEE02742.1|2208911_2209361_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE02743.1|2209464_2209782_-|transposase	putative transposase	transposase	A0A218MNC9	uncultured_virus	39.6	6.0e-10
VEE02744.1|2210409_2210673_+	single strand binding protein	NA	A0A1W6DXL3	Salmonella_phage	66.7	4.1e-12
VEE02745.1|2210687_2210981_+	recombination associated protein	NA	NA	NA	NA	NA
VEE02746.1|2210981_2211338_+	recombination associated protein	NA	NA	NA	NA	NA
VEE02747.1|2211534_2212173_-	putative transcriptional regulator, TetR family	NA	NA	NA	NA	NA
VEE02748.1|2212368_2213910_+	putative regulatory protein (GGDEF domain)	NA	NA	NA	NA	NA
VEE02749.1|2214143_2214461_+|transposase	putative transposase	transposase	A0A218MNC9	uncultured_virus	39.6	6.0e-10
VEE02750.1|2214564_2214969_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE02751.1|2215333_2217781_+	SidC homolog	NA	NA	NA	NA	NA
VEE02752.1|2218908_2219814_+	putative exonuclease	NA	A0A223W0B0	Agrobacterium_phage	37.1	1.4e-30
VEE02753.1|2219877_2220135_+	Uncharacterised protein family (UPF0270)	NA	NA	NA	NA	NA
VEE02754.1|2220252_2221170_-	putative transcriptional regulator, MarR family	NA	NA	NA	NA	NA
VEE02755.1|2221346_2221460_-	putative DNA damage inducible protein P	NA	NA	NA	NA	NA
VEE02756.1|2221557_2221740_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02757.1|2221745_2222237_-	putative DNA damage inducible protein P	NA	A0A1W6JNT0	Morganella_phage	24.2	8.2e-06
VEE02758.1|2222215_2222437_-	DNA-damage inducible protein P	NA	NA	NA	NA	NA
VEE02759.1|2222444_2222804_-	DNA polymerase V, subunit C	NA	NA	NA	NA	NA
VEE02760.1|2222821_2223136_-	DNA polymerase V, subunit C	NA	A0A0P0I4F0	Acinetobacter_phage	32.3	8.1e-07
VEE02761.1|2223506_2224634_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02762.1|2225204_2225537_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02763.1|2226202_2227120_+	Uncharacterised protein	NA	A0A0F7LBR6	Escherichia_phage	35.0	3.7e-44
VEE02764.1|2227584_2228304_-	putative endonuclease-1	NA	NA	NA	NA	NA
VEE02765.1|2228455_2228557_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02766.1|2229157_2232469_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02767.1|2232700_2232871_-	HlyD family secretion protein	NA	NA	NA	NA	NA
VEE02768.1|2232879_2233944_-	HlyD family secretion protein	NA	NA	NA	NA	NA
VEE02769.1|2233946_2235170_-	toxin secretion ATP binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	28.3	7.3e-19
VEE02770.1|2235177_2236149_-	toxin secretion ATP-binding protein	NA	NA	NA	NA	NA
VEE02771.1|2236418_2236685_+|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	67.2	6.4e-21
VEE02772.1|2237327_2237834_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02773.1|2238221_2239082_-	acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
VEE02774.1|2239522_2240635_-	gamma-glutamyl:cysteine ligase	NA	NA	NA	NA	NA
VEE02775.1|2240653_2241826_-	Na+/H+ antiporters	NA	NA	NA	NA	NA
VEE02776.1|2242514_2243573_-	small-conductance mechanosensitive channel	NA	NA	NA	NA	NA
VEE02777.1|2243642_2244929_-	voltage-gated chloride channel protein (ClC-type)	NA	NA	NA	NA	NA
VEE02778.1|2245268_2246207_+	Dot/Icm secretion system substrate	NA	NA	NA	NA	NA
VEE02779.1|2246597_2247017_+	uncharacterized cyanobacterial protein	NA	NA	NA	NA	NA
VEE02780.1|2248218_2248413_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE02781.1|2248456_2248864_+	aminopeptidase	NA	NA	NA	NA	NA
VEE02782.1|2248960_2249254_+	aminopeptidase	NA	NA	NA	NA	NA
VEE02783.1|2250321_2253537_+	BNR/Asp-box repeat containing protein	NA	A0A0N9RV52	Escherichia_phage	40.2	6.2e-09
VEE02784.1|2254343_2256476_-	Prolyl endopeptidase	NA	A0A1V0SHT0	Klosneuvirus	33.6	5.1e-76
VEE02785.1|2257038_2260353_+	ankyrin repeat protein	NA	NA	NA	NA	NA
VEE02786.1|2260362_2260572_+|integrase	Prophage integrase	integrase	NA	NA	NA	NA
VEE02787.1|2260734_2261022_-|transposase	transposase, IS4 family TnpA	transposase	NA	NA	NA	NA
VEE02788.1|2261215_2262388_-|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
2274001:2274016	attR	CATCCCCACCGCCTAC	NA	NA	NA	NA
>prophage 5
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	2396699	2403516	4162813		Acinetobacter_phage(42.86%)	9	NA	NA
VEE02915.1|2396699_2397497_-	toluene transporter subunit: ATP-binding component of ABC superfamily	NA	G9BWD6	Planktothrix_phage	34.2	7.1e-23
VEE02916.1|2397630_2398593_+	arabinose 5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.1	4.2e-38
VEE02917.1|2398592_2399120_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	A0A140XBD6	Dickeya_phage	47.1	1.4e-24
VEE02918.1|2399116_2399689_+	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	NA	NA	NA	NA	NA
VEE02919.1|2399669_2400212_+	OstA family protein	NA	NA	NA	NA	NA
VEE02920.1|2400208_2400934_+	lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily	NA	A0A2H4PQG7	Staphylococcus_phage	26.0	7.3e-19
VEE02921.1|2401153_2401720_+	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.5e-56
VEE02922.1|2401709_2402744_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	45.9	4.6e-75
VEE02923.1|2402736_2403516_+	indole-3-glycerol phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	52.0	5.1e-58
>prophage 6
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	2563599	2618847	4162813	transposase	Lactococcus_phage(16.67%)	41	NA	NA
VEE03090.1|2563599_2563887_+|transposase	Putative transposase	transposase	NA	NA	NA	NA
VEE03091.1|2564535_2565249_+	nitroreductase	NA	NA	NA	NA	NA
VEE03092.1|2566040_2566250_+	DNA-binding transcriptional repressor	NA	A0A1X9IGI9	Lactococcus_phage	62.3	8.3e-16
VEE03093.1|2566335_2566608_+	RNA binding protein, cold-inducible rrm	NA	NA	NA	NA	NA
VEE03094.1|2566956_2568729_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03095.1|2568929_2569388_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03096.1|2569777_2570146_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03097.1|2570366_2572952_-	alanine racemase	NA	NA	NA	NA	NA
VEE03098.1|2573214_2573703_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEE03099.1|2574761_2574896_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03100.1|2575515_2578296_+	ankyrin repeat protein	NA	NA	NA	NA	NA
VEE03101.1|2578429_2578618_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03102.1|2578719_2579274_-	putative sporulation protein YtaF	NA	NA	NA	NA	NA
VEE03103.1|2580431_2582405_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03104.1|2582569_2585416_-	NAD dependent epimerase/dehydratase	NA	NA	NA	NA	NA
VEE03105.1|2585575_2586382_-	glutamine amidotransferase	NA	NA	NA	NA	NA
VEE03106.1|2586588_2587704_+	carboxylate-amine ligase	NA	NA	NA	NA	NA
VEE03107.1|2587790_2587940_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03108.1|2588004_2589036_-	LidE	NA	NA	NA	NA	NA
VEE03109.1|2589498_2591484_-	coiled-coil protein	NA	NA	NA	NA	NA
VEE03110.1|2592158_2593499_+	aminotransferase class-III	NA	A0A1V0SKB7	Klosneuvirus	25.9	8.2e-24
VEE03111.1|2593810_2593969_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03112.1|2594279_2594933_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03113.1|2595410_2595650_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03114.1|2596422_2598198_-	coiled-coil protein	NA	NA	NA	NA	NA
VEE03115.1|2598825_2600436_+	coiled-coil protein	NA	NA	NA	NA	NA
VEE03116.1|2600702_2602529_+	coiled-coil protein	NA	NA	NA	NA	NA
VEE03117.1|2602563_2605749_-	ATPase involved in DNA repair	NA	NA	NA	NA	NA
VEE03118.1|2606502_2606907_-	transcriptional regulator, MerR family	NA	NA	NA	NA	NA
VEE03119.1|2606974_2607721_+	glutaredoxin	NA	A0A248SKD6	Salicola_phage	45.8	3.0e-07
VEE03120.1|2607793_2608615_+	secreted protein	NA	NA	NA	NA	NA
VEE03121.1|2608989_2609085_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03122.1|2609174_2609966_+	coiled-coil protein	NA	NA	NA	NA	NA
VEE03123.1|2609988_2611542_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
VEE03124.1|2611614_2611827_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03125.1|2612054_2612303_+|transposase	Putative transposase	transposase	NA	NA	NA	NA
VEE03126.1|2612482_2613658_+|transposase	transposase (IS652)	transposase	A9YX10	Burkholderia_phage	23.4	5.5e-16
VEE03127.1|2613690_2615109_-|transposase	transposase, IS4 family TnpA	transposase	Q9JMP3	Wolbachia_phage	33.1	2.7e-57
VEE03128.1|2615400_2616528_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03129.1|2617492_2618500_+|transposase	Putative transposase	transposase	A0A218MNE7	uncultured_virus	24.6	2.4e-12
VEE03130.1|2618454_2618847_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	2994036	3003286	4162813	protease	Bacillus_phage(16.67%)	6	NA	NA
VEE03437.1|2994036_2995719_-|protease	serine protease	protease	A0A1B0T6A2	Bacillus_phage	29.1	1.3e-18
VEE03438.1|2996052_2997378_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.9	2.8e-48
VEE03439.1|2997388_2998537_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	59.2	2.6e-127
VEE03440.1|2998645_2999758_-	carbamoyl-phosphate synthetase, glutamine (small subunit)	NA	R4TGJ8	Halovirus	35.3	1.7e-51
VEE03441.1|2999893_3001033_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	36.7	5.7e-26
VEE03442.1|3001336_3003286_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.4	1.5e-146
>prophage 8
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	3186980	3237464	4162813	transposase,protease,tRNA	Caldibacillus_phage(11.11%)	43	NA	NA
VEE03597.1|3186980_3187307_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE03598.1|3187401_3187806_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE03599.1|3188032_3189109_-	DNA damage inducible protein P	NA	A0A290GHP0	Caldibacillus_phage	32.2	1.6e-14
VEE03600.1|3189292_3189799_-	Peptidase S24 family protein	NA	A0A2H4J538	uncultured_Caudovirales_phage	41.9	3.9e-27
VEE03601.1|3190084_3191110_-	essential GTPase	NA	NA	NA	NA	NA
VEE03602.1|3191279_3191558_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
VEE03603.1|3191571_3191883_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
VEE03604.1|3192074_3192731_+	50S ribosomal protein L25	NA	NA	NA	NA	NA
VEE03605.1|3192889_3193459_+|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
VEE03606.1|3193515_3194607_+	GTP-binding protein	NA	NA	NA	NA	NA
VEE03607.1|3194685_3195654_+	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
VEE03608.1|3196327_3197959_+	Ankyrin repeat protein	NA	NA	NA	NA	NA
VEE03609.1|3198448_3201211_-	putative esterase with patatin domain	NA	NA	NA	NA	NA
VEE03610.1|3202267_3204121_+	thermolysin metallopeptidase	NA	NA	NA	NA	NA
VEE03611.1|3204377_3205121_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
VEE03612.1|3205921_3207091_+	oxidoreductase	NA	NA	NA	NA	NA
VEE03613.1|3207320_3207944_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
VEE03614.1|3208414_3209089_-	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA	NA
VEE03615.1|3209512_3210361_+	RNA-binding protein	NA	NA	NA	NA	NA
VEE03616.1|3210530_3210758_-	cation transport regulator	NA	A5IZT6	Spodoptera_litura_granulovirus	42.7	1.3e-09
VEE03617.1|3210935_3211220_-	Protein of uncharacterised function (DUF3175)	NA	A0A0F6TH17	Sinorhizobium_phage	66.3	4.7e-22
VEE03618.1|3211518_3212016_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
VEE03619.1|3212150_3213779_-	rod shape-determining protein MreB	NA	NA	NA	NA	NA
VEE03620.1|3214084_3214855_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03621.1|3214897_3216184_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.2	1.6e-96
VEE03622.1|3216376_3217147_-	UDP-N-acetylglucosamine acyltransferase	NA	NA	NA	NA	NA
VEE03623.1|3217143_3217596_-	(3R)-hydroxymyristoyl-ACP dehydratase	NA	NA	NA	NA	NA
VEE03624.1|3217751_3218795_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
VEE03625.1|3218809_3219310_-	outer membrane protein OmpH	NA	NA	NA	NA	NA
VEE03626.1|3219477_3221790_-	outer membrane protein assembly factor	NA	NA	NA	NA	NA
VEE03627.1|3221924_3223277_-|protease	membrane-associated Zn-dependent protease EcfE	protease	NA	NA	NA	NA
VEE03628.1|3223440_3224223_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
VEE03629.1|3224251_3225010_-	UDP pyrophosphate synthetase	NA	R9W0U9	Flavobacterium_phage	40.3	2.0e-22
VEE03630.1|3225382_3226924_+	phosphoglycerate mutases	NA	NA	NA	NA	NA
VEE03631.1|3226916_3228140_+	peptidase, M23 family	NA	NA	NA	NA	NA
VEE03632.1|3228230_3229583_+|protease	carboxy-terminal protease	protease	A0A0R6PIZ1	Moraxella_phage	26.3	3.6e-19
VEE03633.1|3229772_3230615_+|protease	protease heat shock protein	protease	NA	NA	NA	NA
VEE03634.1|3230728_3231304_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
VEE03635.1|3231435_3232101_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03636.1|3232260_3232989_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEE03637.1|3233183_3234668_+	adenosine deaminase	NA	NA	NA	NA	NA
VEE03638.1|3235164_3236463_-	adenylosuccinate synthetase	NA	A0A285PX35	Cedratvirus	34.1	5.3e-68
VEE03639.1|3236549_3237464_-|protease	membrane protease subunit HflC	protease	R4VJU7	Alteromonas_phage	26.3	1.5e-05
>prophage 9
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	3427718	3505090	4162813	integrase,protease,transposase	Staphylococcus_phage(22.22%)	60	3429159:3429173	3439465:3439479
VEE03830.1|3427718_3428948_-|integrase	phage integrase	integrase	A0A0P0IKP2	Acinetobacter_phage	32.1	2.6e-48
3429159:3429173	attL	CACCAATAAAATCAA	NA	NA	NA	NA
VEE03831.1|3429777_3429993_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03832.1|3430280_3431699_+|transposase	transposase, IS4 family TnpA	transposase	Q9JMP3	Wolbachia_phage	33.1	1.6e-57
VEE03833.1|3431554_3431887_-	universal stress protein family	NA	NA	NA	NA	NA
VEE03834.1|3431954_3432227_-	universal stress protein family	NA	NA	NA	NA	NA
VEE03835.1|3432753_3433611_+	universal stress protein family	NA	NA	NA	NA	NA
VEE03836.1|3434323_3434554_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
VEE03837.1|3434704_3435331_+	HipA protein, DNA binding regulator	NA	NA	NA	NA	NA
VEE03838.1|3435327_3435747_+	HipA protein	NA	NA	NA	NA	NA
VEE03839.1|3436112_3436670_-|integrase	phage integrase	integrase	NA	NA	NA	NA
VEE03840.1|3437268_3439002_-|protease	thiol protease	protease	NA	NA	NA	NA
VEE03841.1|3440011_3441355_-	coiled-coil protein	NA	NA	NA	NA	NA
3439465:3439479	attR	CACCAATAAAATCAA	NA	NA	NA	NA
VEE03842.1|3442002_3443238_-	transporter of the major facilitator superfamily (MFS)	NA	NA	NA	NA	NA
VEE03843.1|3443652_3444180_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03844.1|3444337_3446953_-	acetyltransferase	NA	A0A2H4PQU7	Staphylococcus_phage	25.5	3.2e-24
VEE03845.1|3446934_3447147_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03846.1|3447513_3448053_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEE03847.1|3448139_3448418_+	phosphatidylethanolamine-binding protein	NA	NA	NA	NA	NA
VEE03848.1|3448333_3449098_-	ABC transporter permease	NA	NA	NA	NA	NA
VEE03849.1|3449105_3449795_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.0	7.0e-11
VEE03850.1|3449992_3450178_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03851.1|3450240_3451497_-	transmembrane protein	NA	NA	NA	NA	NA
VEE03852.1|3451735_3452227_+	small heat shock protein	NA	NA	NA	NA	NA
VEE03853.1|3452376_3453774_-	oxydoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	36.6	1.2e-81
VEE03854.1|3453977_3455846_-	cation transport ATPase	NA	E4ZFI9	Streptococcus_phage	26.9	2.1e-49
VEE03855.1|3456331_3457108_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03856.1|3457278_3457791_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
VEE03857.1|3457921_3458500_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03858.1|3459525_3460290_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
VEE03859.1|3460464_3461211_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03860.1|3461540_3462377_-	protein kinase	NA	NA	NA	NA	NA
VEE03861.1|3462785_3464657_-	coiled-coil protein	NA	NA	NA	NA	NA
VEE03862.1|3465232_3467548_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
VEE03863.1|3467614_3468130_-	transmembrane protein	NA	NA	NA	NA	NA
VEE03864.1|3468214_3468541_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03865.1|3468825_3469659_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03866.1|3469895_3470852_-	xylene monooxygenase	NA	NA	NA	NA	NA
VEE03867.1|3470848_3471220_-	hemoglobin (protozoan/cyanobacterial globin family)	NA	NA	NA	NA	NA
VEE03868.1|3471299_3471746_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
VEE03869.1|3471814_3473371_-	amino acid transport protein	NA	NA	NA	NA	NA
VEE03870.1|3473550_3474945_-	glutamate decarboxylase B, PLP-dependent	NA	NA	NA	NA	NA
VEE03871.1|3474956_3475625_-	Multiple antibiotic resistance (MarC)-related protein	NA	NA	NA	NA	NA
VEE03872.1|3475727_3477626_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03873.1|3477702_3478893_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03874.1|3479015_3481043_-|protease	serine protease, subtilase family	protease	NA	NA	NA	NA
VEE03875.1|3481062_3482493_-	NHL repeat protein	NA	NA	NA	NA	NA
VEE03876.1|3482841_3483678_+	formyltetrahydrofolate hydrolase	NA	M4QRX9	Synechococcus_phage	45.6	4.1e-13
VEE03877.1|3483907_3484603_-	Aspartyl/Asparaginyl beta-hydroxylase	NA	NA	NA	NA	NA
VEE03878.1|3484949_3494939_-	transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat)	NA	NA	NA	NA	NA
VEE03879.1|3495501_3496248_+	oxidoreductase, short-chain dehydrogenase/reductase	NA	A0A167REC2	Powai_lake_megavirus	24.9	6.4e-10
VEE03880.1|3496485_3497361_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03881.1|3497425_3498286_-	HAD phosphatase, family IIIC	NA	NA	NA	NA	NA
VEE03882.1|3498376_3498946_+	transcriptional regulator	NA	NA	NA	NA	NA
VEE03883.1|3499103_3500057_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE03884.1|3500488_3500920_-	major facilitator superfamily (MFS) transporter	NA	NA	NA	NA	NA
VEE03885.1|3501047_3502640_-	transporter fused subunits of ABC superfamily: ATP-binding components	NA	A0A1V0SKJ1	Klosneuvirus	27.6	4.8e-55
VEE03886.1|3502636_3503338_-	peptide synthetase, non-ribosomal	NA	NA	NA	NA	NA
VEE03887.1|3503345_3503702_-	peptide synthetase, non-ribosomal	NA	NA	NA	NA	NA
VEE03888.1|3503810_3504077_-	polyketide synthase	NA	NA	NA	NA	NA
VEE03889.1|3504115_3505090_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 10
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	3772557	3821849	4162813	transposase,tRNA,holin,integrase	Vibrio_phage(12.5%)	49	3787007:3787024	3824249:3824266
VEE04093.1|3772557_3773706_-|tRNA	multifunctional tRNA nucleotidy	tRNA	A0A2I7SAR1	Vibrio_phage	39.7	1.8e-51
VEE04094.1|3774026_3775430_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04095.1|3775703_3776645_+	dehydrogenase	NA	NA	NA	NA	NA
VEE04096.1|3776692_3777070_-	membrane-associated, metal-dependent hydrolase	NA	NA	NA	NA	NA
VEE04097.1|3777012_3777318_-	membrane-associated, metal-dependent hydrolase	NA	NA	NA	NA	NA
VEE04098.1|3777812_3778403_-	Heat shock hsp20	NA	NA	NA	NA	NA
VEE04099.1|3778425_3779424_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04100.1|3779914_3780685_-	methyltransferases	NA	NA	NA	NA	NA
VEE04101.1|3780711_3781638_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
VEE04102.1|3781627_3782086_-	Predicted DNA-binding protein with PD1-like DNA-binding motif	NA	NA	NA	NA	NA
VEE04103.1|3782298_3783390_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04104.1|3783493_3783661_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04105.1|3783915_3785679_-	citrate transporter	NA	Q6A201	Oenococcus_phage	25.8	5.8e-09
VEE04106.1|3786073_3787105_-	Uncharacterized conserved protein, contains double-stranded beta-helix domain	NA	NA	NA	NA	NA
3787007:3787024	attL	TATTTCAATTCCTTCATT	NA	NA	NA	NA
VEE04107.1|3787465_3789004_+	glycosyltransferase	NA	NA	NA	NA	NA
VEE04108.1|3789097_3790033_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04109.1|3790042_3792325_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04110.1|3792451_3793339_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.3	2.7e-15
VEE04111.1|3793444_3793834_+|holin	holin-like protein	holin	NA	NA	NA	NA
VEE04112.1|3793811_3794519_+	inner membrane protein, LrgB family protein	NA	NA	NA	NA	NA
VEE04113.1|3794632_3795544_-	cation efflux protein	NA	NA	NA	NA	NA
VEE04114.1|3795614_3797027_-	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.0	1.2e-57
VEE04115.1|3797199_3797604_+	outer membrane lipoprotein	NA	NA	NA	NA	NA
VEE04116.1|3797873_3798863_+	Ca2+/Na+ antiporter	NA	NA	NA	NA	NA
VEE04117.1|3798894_3800136_+	major facilitator superfamily transporter	NA	NA	NA	NA	NA
VEE04118.1|3800359_3800605_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04119.1|3800621_3800852_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04120.1|3801591_3801870_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04121.1|3802430_3805355_+	regulatory protein (GGDEF, EAL, PAS and PAC domains)	NA	G3MA91	Bacillus_virus	37.9	9.5e-25
VEE04122.1|3805393_3805576_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04123.1|3806036_3807479_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04124.1|3807587_3807851_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE04125.1|3807950_3808256_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE04126.1|3808172_3808400_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04127.1|3808371_3808875_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04128.1|3809063_3810314_+	lipoprotein	NA	NA	NA	NA	NA
VEE04129.1|3811036_3811651_-	24 kDa macrophage-induced major protein	NA	NA	NA	NA	NA
VEE04130.1|3812054_3812237_-	Transposase IS3/IS911 family protein	NA	NA	NA	NA	NA
VEE04131.1|3812506_3813154_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04132.1|3813178_3814798_-	protein containing FG-GAP repeats (motif found in alpha integrins)	NA	NA	NA	NA	NA
VEE04133.1|3815180_3815324_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04134.1|3815320_3815548_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE04135.1|3815849_3816146_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04136.1|3816394_3817753_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04137.1|3817869_3818250_-|transposase	transposase	transposase	A0A077SL39	Escherichia_phage	42.3	2.0e-20
VEE04138.1|3819048_3819363_-	putative transcriptional regulator	NA	NA	NA	NA	NA
VEE04139.1|3819355_3819697_-	Addiction module killer protein HI1419	NA	A0A141GEX6	Brucella_phage	45.1	1.1e-14
VEE04140.1|3819798_3820578_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04141.1|3820643_3821849_-|integrase	putative lambdoid prophage Rac integrase	integrase	A0A1W6JTA0	Pseudomonas_phage	47.2	4.5e-90
3824249:3824266	attR	AATGAAGGAATTGAAATA	NA	NA	NA	NA
>prophage 11
LR134286	Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1	4162813	3835823	3866361	4162813	transposase,integrase	Bacillus_phage(28.57%)	34	3826229:3826244	3858726:3858741
3826229:3826244	attL	ATCATTTTCTTTCATA	NA	NA	NA	NA
VEE04159.1|3835823_3836300_-|transposase	ISSod6 transposase	transposase	NA	NA	NA	NA
VEE04160.1|3836292_3836604_-|transposase	ISSod6 transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	41.0	8.8e-14
VEE04161.1|3836807_3838256_+	Sensor protein	NA	NA	NA	NA	NA
VEE04162.1|3838795_3840094_-	cyanophycin synthetase	NA	NA	NA	NA	NA
VEE04163.1|3840523_3842140_-	Sensor protein	NA	NA	NA	NA	NA
VEE04164.1|3842142_3842835_-	two component system DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	32.3	1.1e-24
VEE04165.1|3843075_3845190_+	Beta-lactamase	NA	NA	NA	NA	NA
VEE04166.1|3845245_3846070_-	Streptomycin 3''-adenylyltransferase	NA	NA	NA	NA	NA
VEE04167.1|3846050_3846488_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04168.1|3846474_3847053_-	nucleotidyltransferase	NA	NA	NA	NA	NA
VEE04169.1|3847131_3847446_-	Uncharacterised ACR, YggU family COG1872	NA	NA	NA	NA	NA
VEE04170.1|3847612_3848590_+	Phosphotransferase enzyme family	NA	NA	NA	NA	NA
VEE04171.1|3848698_3849391_+	transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	29.1	6.1e-15
VEE04172.1|3849681_3850050_+	glyoxalase family protein superfamily	NA	NA	NA	NA	NA
VEE04173.1|3850046_3850481_+	EVE domain	NA	NA	NA	NA	NA
VEE04174.1|3850503_3850965_+	Transcription activator, effector binding	NA	NA	NA	NA	NA
VEE04175.1|3850986_3851535_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
VEE04176.1|3851811_3851982_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
VEE04177.1|3852011_3852983_-	spectinomycin phosphotransferase	NA	NA	NA	NA	NA
VEE04178.1|3852999_3853725_-	Acetyltransferase (GNAT) family	NA	NA	NA	NA	NA
VEE04179.1|3853751_3854264_-	Domain of Uncharacterised Function (DUF1543)	NA	NA	NA	NA	NA
VEE04180.1|3854270_3854654_-	AIG2-like family	NA	NA	NA	NA	NA
VEE04181.1|3854806_3857704_+|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	22.2	1.8e-44
VEE04182.1|3857703_3858405_+|integrase	phage integrase	integrase	A0A1B1P7C7	Bacillus_phage	24.8	1.8e-09
VEE04183.1|3858422_3858740_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04184.1|3859114_3859564_+	Uncharacterised protein	NA	NA	NA	NA	NA
3858726:3858741	attR	ATCATTTTCTTTCATA	NA	NA	NA	NA
VEE04185.1|3859610_3859772_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04186.1|3860014_3860839_-	Protein of uncharacterised function (Hypoth_ymh)	NA	NA	NA	NA	NA
VEE04187.1|3861276_3861444_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04188.1|3861534_3862611_-	Putative cytoplasmic protein	NA	Q9JMP5	Wolbachia_phage	31.0	3.1e-37
VEE04189.1|3862763_3863888_-	phosphohydrolase	NA	A0A1V0SLI6	Klosneuvirus	26.5	8.2e-17
VEE04190.1|3863996_3864377_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE04191.1|3864379_3864730_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE04192.1|3864726_3866361_-|transposase	Putative transposase	transposase	NA	NA	NA	NA
