assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636405.1_41767_E01	LR134270	Escherichia coli strain NCTC8196 genome assembly, chromosome: 1	2	1739296-1741008	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	Type I-F	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	27,28,28	28	TypeI-F	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	NA,NA	NA|551aa|up_9|LR134270.1_1726046_1727699_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|LR134270.1_1727841_1728741_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|LR134270.1_1728881_1729577_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|LR134270.1_1730001_1731660_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|331aa|up_5|LR134270.1_1731656_1732649_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|LR134270.1_1732765_1733881_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|LR134270.1_1733877_1735824_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|LR134270.1_1735896_1736121_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|LR134270.1_1736443_1736764_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|LR134270.1_1736794_1739071_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	cas1|328aa|down_0|LR134270.1_1741179_1742163_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|down_1|LR134270.1_1742159_1745393_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|436aa|down_2|LR134270.1_1745718_1747026_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|308aa|down_3|LR134270.1_1747022_1747946_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|334aa|down_4|LR134270.1_1747956_1748958_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|LR134270.1_1748968_1749523_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|183aa|down_6|LR134270.1_1749908_1750457_+	PRK15220, PRK15220, fimbrial protein YehD	NA|227aa|down_7|LR134270.1_1750510_1751191_+	PRK15218, PRK15218, fimbrial assembly chaperone	NA|829aa|down_8|LR134270.1_1751205_1753692_+	PRK15217, PRK15217, fimbrial outer membrane usher protein; Provisional	NA|338aa|down_9|LR134270.1_1753703_1754717_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]
GCA_900636405.1_41767_E01	LR134270	Escherichia coli strain NCTC8196 genome assembly, chromosome: 1	3	1755267-1755595	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	Type I-F	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,5,5	5	TypeI-F	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	NA,NA	cas1|328aa|up_9|LR134270.1_1741179_1742163_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|up_8|LR134270.1_1742159_1745393_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|436aa|up_7|LR134270.1_1745718_1747026_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|308aa|up_6|LR134270.1_1747022_1747946_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|334aa|up_5|LR134270.1_1747956_1748958_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_4|LR134270.1_1748968_1749523_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|183aa|up_3|LR134270.1_1749908_1750457_+	PRK15220, PRK15220, fimbrial protein YehD	NA|227aa|up_2|LR134270.1_1750510_1751191_+	PRK15218, PRK15218, fimbrial assembly chaperone	NA|829aa|up_1|LR134270.1_1751205_1753692_+	PRK15217, PRK15217, fimbrial outer membrane usher protein; Provisional	NA|338aa|up_0|LR134270.1_1753703_1754717_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|73aa|down_0|LR134270.1_1755702_1755921_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|LR134270.1_1756205_1756910_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|LR134270.1_1756954_1758676_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|LR134270.1_1758676_1760443_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|LR134270.1_1760565_1761531_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|LR134270.1_1762075_1762570_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1371aa|down_6|LR134270.1_1762704_1766817_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|LR134270.1_1766971_1767583_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|LR134270.1_1767592_1768936_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|LR134270.1_1769026_1770319_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
GCA_900636405.1_41767_E01	LR134270	Escherichia coli strain NCTC8196 genome assembly, chromosome: 1	4	2322660-2322783	4	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	NA,NA	NA|249aa|up_9|LR134270.1_2312519_2313266_+	PRK09580, sufC, cysteine desulfurase ATPase component; Reviewed	NA|424aa|up_8|LR134270.1_2313240_2314512_+	PRK10948, PRK10948, Fe-S cluster assembly protein SufD	NA|407aa|up_7|LR134270.1_2314508_2315729_+	PRK09295, PRK09295, cysteine desulfurase SufS	NA|139aa|up_6|LR134270.1_2315741_2316158_+	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|335aa|up_5|LR134270.1_2316306_2317311_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|79aa|up_4|LR134270.1_2317374_2317611_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_3|LR134270.1_2317921_2319334_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_2|LR134270.1_2319874_2320084_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|51aa|up_1|LR134270.1_2320323_2320476_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_0|LR134270.1_2320487_2322092_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134270.1_2323097_2324354_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134270.1_2324394_2325768_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|209aa|down_2|LR134270.1_2325983_2326610_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134270.1_2326669_2327818_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134270.1_2328108_2329320_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134270.1_2329432_2330365_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134270.1_2330361_2331387_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134270.1_2331940_2333110_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134270.1_2333256_2333838_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|276aa|down_9|LR134270.1_2333965_2334793_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900636405.1_41767_E01	LR134270	Escherichia coli strain NCTC8196 genome assembly, chromosome: 1	5	3471744-3471887	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	Orphan	GCACTTGTAAGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCAATGACTGT	52	1	2	3471796-3471835|3471796-3471835	LR134270.1_3576938-3576899|LR134270.1_3577028-3576989	NA	1	1	Orphan	cas3,DEDDh,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,csa3	NA,NA	NA|282aa|up_9|LR134270.1_3462456_3463302_+	PRK11493, sseA, 3-mercaptopyruvate sulfurtransferase; Provisional	NA|428aa|up_8|LR134270.1_3464586_3465870_-	PRK05015, PRK05015, aminopeptidase B; Provisional	NA|67aa|up_7|LR134270.1_3465928_3466129_-	PRK10721, PRK10721, hypothetical protein; Provisional	NA|112aa|up_6|LR134270.1_3466140_3466476_-	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|617aa|up_5|LR134270.1_3466477_3468328_-	PRK05183, hscA, chaperone protein HscA; Provisional	NA|172aa|up_4|LR134270.1_3468344_3468860_-	PRK05014, hscB, co-chaperone HscB; Provisional	NA|108aa|up_3|LR134270.1_3468955_3469279_-	PRK09502, iscA, iron-sulfur cluster assembly protein IscA	NA|129aa|up_2|LR134270.1_3469295_3469682_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_1|LR134270.1_3469709_3470924_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|163aa|up_0|LR134270.1_3471035_3471524_-	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR	NA|268aa|down_0|LR134270.1_3472745_3473549_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|283aa|down_1|LR134270.1_3473693_3474542_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|425aa|down_2|LR134270.1_3474738_3476013_+	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional	NA|380aa|down_3|LR134270.1_3476013_3477153_-	PRK11128, PRK11128, 3-phenylpropionate MFS transporter	NA|141aa|down_4|LR134270.1_3477389_3477812_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|289aa|down_5|LR134270.1_3477897_3478764_-	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB	NA|354aa|down_6|LR134270.1_3478775_3479837_-	cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like	NA|333aa|down_7|LR134270.1_3479902_3480901_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|504aa|down_8|LR134270.1_3480925_3482437_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|328aa|down_9|LR134270.1_3482459_3483443_-	cd06317, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems
