assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636215.1_39282_G02	LR134237	Escherichia coli strain NCTC9022 genome assembly, chromosome: 1	1	1734078-1734191	1	CRISPRCasFinder	no		WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	Orphan	TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	33	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	NA,NA	NA|268aa|up_9|LR134237.1_1723022_1723826_+	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional	NA|309aa|up_8|LR134237.1_1723866_1724793_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|LR134237.1_1724985_1726176_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|LR134237.1_1726172_1727432_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|LR134237.1_1727421_1729050_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|LR134237.1_1729322_1730681_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|LR134237.1_1730685_1731762_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|LR134237.1_1731964_1732615_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|LR134237.1_1732668_1732923_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|LR134237.1_1732922_1734053_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|LR134237.1_1734242_1736528_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1255aa|down_1|LR134237.1_1737203_1740968_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|LR134237.1_1741107_1741830_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|LR134237.1_1741976_1744604_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|LR134237.1_1744752_1746441_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|LR134237.1_1746437_1747061_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|LR134237.1_1747204_1751599_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|LR134237.1_1751599_1753249_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|LR134237.1_1753253_1754030_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|LR134237.1_1754103_1755288_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_900636215.1_39282_G02	LR134237	Escherichia coli strain NCTC9022 genome assembly, chromosome: 1	2	2469885-2470008	2	CRISPRCasFinder	no	DEDDh	WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	NA,NA	NA|79aa|up_9|LR134237.1_2458789_2459026_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|LR134237.1_2459336_2460749_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134237.1_2461306_2461516_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134237.1_2461971_2462598_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134237.1_2462618_2464721_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134237.1_2464733_2465372_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|LR134237.1_2465435_2466104_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|LR134237.1_2466100_2466886_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_1|LR134237.1_2466937_2467702_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|537aa|up_0|LR134237.1_2467707_2469318_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134237.1_2470322_2471579_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134237.1_2471619_2472993_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134237.1_2473207_2473849_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|262aa|down_3|LR134237.1_2473888_2474674_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|114aa|down_4|LR134237.1_2474694_2475036_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|344aa|down_5|LR134237.1_2475326_2476358_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|78aa|down_6|LR134237.1_2476303_2476537_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_7|LR134237.1_2476649_2477582_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_8|LR134237.1_2477578_2478604_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_9|LR134237.1_2479157_2480327_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCA_900636215.1_39282_G02	LR134237	Escherichia coli strain NCTC9022 genome assembly, chromosome: 1	4	4270796-4270928	1	PILER-CR	no		WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	NA,NA	NA|105aa|up_9|LR134237.1_4262195_4262510_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|LR134237.1_4262512_4262746_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|197aa|up_7|LR134237.1_4262831_4263422_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|LR134237.1_4263502_4265365_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|LR134237.1_4265357_4265888_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|LR134237.1_4265995_4267327_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|LR134237.1_4267385_4267673_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|LR134237.1_4267669_4268956_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|LR134237.1_4268978_4269920_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|LR134237.1_4269934_4270705_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|LR134237.1_4271177_4272692_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|LR134237.1_4272722_4273865_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|LR134237.1_4273992_4275210_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|LR134237.1_4275282_4276836_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|LR134237.1_4276944_4277730_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|LR134237.1_4277735_4278326_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|LR134237.1_4278444_4278840_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|LR134237.1_4279100_4282322_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|LR134237.1_4282339_4283488_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|LR134237.1_4283943_4284765_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCA_900636215.1_39282_G02	LR134237	Escherichia coli strain NCTC9022 genome assembly, chromosome: 1	5	4442420-4442559	4	CRISPRCasFinder	no		WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	Orphan	TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	44	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	NA,NA	NA|340aa|up_9|LR134237.1_4430630_4431650_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|LR134237.1_4431653_4432217_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|LR134237.1_4432433_4433465_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|LR134237.1_4433488_4434253_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|LR134237.1_4434317_4435637_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|LR134237.1_4435703_4436702_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|LR134237.1_4436779_4438282_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|LR134237.1_4438442_4439525_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|360aa|up_1|LR134237.1_4439524_4440604_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|LR134237.1_4440891_4442403_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|LR134237.1_4442660_4443104_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|LR134237.1_4443103_4445959_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|396aa|down_2|LR134237.1_4446005_4447193_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|LR134237.1_4447385_4447889_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|LR134237.1_4448066_4448483_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|LR134237.1_4448644_4449649_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|LR134237.1_4449693_4450146_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_7|LR134237.1_4450822_4452043_+	PRK01388, PRK01388, arginine deiminase; Provisional	NA|311aa|down_8|LR134237.1_4452053_4452986_+	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|335aa|down_9|LR134237.1_4453009_4454014_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated
