The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	953928	1004181	4594692	tRNA,transposase	Hokovirus(14.29%)	46	NA	NA
VEC77894.1|953928_954711_+|tRNA	tRNA pseudouridine synthase C	tRNA	NA	NA	NA	NA
VEC77896.1|954728_955178_+	putative flavodoxin	NA	NA	NA	NA	NA
VEC77898.1|955612_956965_+	glucarate transporter	NA	NA	NA	NA	NA
VEC77900.1|956966_958307_+	glucarate dehydratase	NA	NA	NA	NA	NA
VEC77902.1|958327_959668_+	glucarate dehydratase	NA	NA	NA	NA	NA
VEC77904.1|959899_962656_-	two-component sensor kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	30.6	6.4e-55
VEC77906.1|962712_964014_+	23s rRNA (uracil-5-)-methyltransferase	NA	A0A2K5B251	Erysipelothrix_phage	27.9	5.2e-39
VEC77908.1|964061_966296_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
VEC77910.1|966373_966622_+	antitoxin MazE	NA	NA	NA	NA	NA
VEC77912.1|966621_966957_+	toxin ChpA	NA	NA	NA	NA	NA
VEC77914.1|967027_967819_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
VEC77916.1|968046_969684_+	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.4	1.8e-153
VEC77918.1|969771_971070_+	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	58.8	2.0e-131
VEC77920.1|971129_971615_-	protein	NA	NA	NA	NA	NA
VEC77922.1|971830_972130_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC77924.1|972126_972993_+|transposase	IS3 element transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
VEC77926.1|973020_973263_-	protein	NA	NA	NA	NA	NA
VEC77928.1|973276_973417_-	small protein involved in the cell envelope stress response	NA	NA	NA	NA	NA
VEC77930.1|973555_974227_+	7-carboxy-7-deazaguanine synthase; queosine biosynthesis	NA	A0A2I7S8X1	Vibrio_phage	25.0	1.7e-14
VEC77932.1|975599_977078_-	putative sugar kinase	NA	NA	NA	NA	NA
VEC77934.1|977104_978382_-	major facilitator superfamily protein	NA	NA	NA	NA	NA
VEC77936.1|978700_979486_+	putative short chain dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.1	6.5e-21
VEC77938.1|979555_981010_+	putative FAD-binding oxidoreductase	NA	NA	NA	NA	NA
VEC77940.1|981031_982441_+	major facilitator superfamily protein	NA	NA	NA	NA	NA
VEC77942.1|982418_983198_+	electron transfer flavoprotein subunit YgcR	NA	NA	NA	NA	NA
VEC77944.1|983194_984055_+	electron transfer flavoprotein subunit YgcQ	NA	NA	NA	NA	NA
VEC77946.1|984202_984778_-	glycerol antiterminator regulatory protein	NA	NA	NA	NA	NA
VEC77948.1|984794_985055_-	ferredoxin-like protein YgcO	NA	NA	NA	NA	NA
VEC77950.1|985045_986317_-	putative FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
VEC77952.1|986394_986760_-	6-pyruvoyl tetrahydrobiopterin synthase	NA	NA	NA	NA	NA
VEC77954.1|987075_988875_+	sulfite reductase (NADPH) flavoprotein alpha subunit	NA	NA	NA	NA	NA
VEC77956.1|988874_990587_+	sulfite reductase (NADPH) hemoprotein beta subunit	NA	NA	NA	NA	NA
VEC77958.1|990660_991395_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA	NA
VEC77960.1|991841_991982_-|transposase	transposase	transposase	NA	NA	NA	NA
VEC77962.1|992004_993117_-|transposase	IS186, transposase	transposase	NA	NA	NA	NA
VEC77964.1|993355_994489_+	CRISPR-associated helicase Cas3	NA	NA	NA	NA	NA
VEC77966.1|994488_996054_+	CRISPR-associated helicase Cas3	NA	NA	NA	NA	NA
VEC77968.1|996151_997714_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77970.1|997710_998247_+	CRISPR-associated Cse2 family protein	NA	NA	NA	NA	NA
VEC77971.1|998258_999314_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77973.1|999324_1000071_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77975.1|1000052_1000703_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77977.1|1000699_1001623_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77979.1|1001619_1001913_+	CRISPR-associated protein	NA	NA	NA	NA	NA
VEC77981.1|1002905_1004018_+|transposase	IS186, transposase	transposase	NA	NA	NA	NA
VEC77983.1|1004040_1004181_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	1011910	1025092	4594692	tRNA	Escherichia_phage(50.0%)	13	NA	NA
VEC78006.1|1011910_1012672_+	stationary phase survival protein SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
VEC78008.1|1012665_1013292_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
VEC78010.1|1013431_1014571_+	lipoprotein NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
VEC78012.1|1014633_1014723_+	RNA polymerase sigma factor RpoS	NA	NA	NA	NA	NA
VEC78014.1|1014792_1015626_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	5.1e-32
VEC78016.1|1015719_1017084_-	inner membrane permease YgbN	NA	NA	NA	NA	NA
VEC78018.1|1017171_1017948_-	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
VEC78020.1|1017952_1018591_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
VEC78022.1|1018587_1019850_-|tRNA	paral putative tRNA synthase	tRNA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
VEC78024.1|1019846_1020755_-	oxidoreductase YgbJ	NA	A0A077SLF7	Escherichia_phage	76.5	3.0e-118
VEC78026.1|1020950_1021718_+	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
VEC78028.1|1021768_1022425_-	serine/threonine-specific protein phosphatase 2	NA	A0A222YWF0	Escherichia_phage	46.3	6.2e-49
VEC78030.1|1022530_1025092_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
>prophage 3
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	1627151	1638867	4594692		Enterobacteria_phage(85.71%)	10	NA	NA
VEC79101.1|1627151_1628078_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	1.7e-23
VEC79103.1|1628082_1628814_+	ABC transporter permease	NA	NA	NA	NA	NA
VEC79105.1|1628794_1628902_-	putative inner membrane protein	NA	NA	NA	NA	NA
VEC79107.1|1628961_1629693_-	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
VEC79109.1|1629914_1631600_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
VEC79111.1|1631596_1632316_+	two-component response-regulatory protein YehT	NA	NA	NA	NA	NA
VEC79113.1|1632362_1632833_+	conserved protein, DUF1456 family	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
VEC79115.1|1632873_1633335_-	lipoprotein yehR	NA	Q9EYF5	Enterobacteria_phage	98.0	3.5e-75
VEC79117.1|1633459_1635463_-	zinc finger SWIM domain-containing protein	NA	Q9EYF6	Enterobacteria_phage	96.3	0.0e+00
VEC79119.1|1635459_1638867_-	protein	NA	Q9EYF7	Enterobacteria_phage	97.7	2.5e-162
>prophage 4
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	2182782	2229884	4594692	tail,integrase,transposase,protease,lysis	Escherichia_phage(25.0%)	51	2211139:2211153	2214428:2214442
VEC80153.1|2182782_2183604_-|protease	putative protease	protease	NA	NA	NA	NA
VEC80155.1|2183879_2184188_-	acid shock protein	NA	NA	NA	NA	NA
VEC80157.1|2184611_2185865_-	major facilitator superfamily protein	NA	NA	NA	NA	NA
VEC80159.1|2185971_2186865_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEC80161.1|2186999_2188220_+	protein Mlc (making large colonies protein)	NA	NA	NA	NA	NA
VEC80163.1|2188344_2189040_+	dithiobiotin synthetase	NA	NA	NA	NA	NA
VEC80165.1|2188992_2190249_-	voltage-gated ClC-type chloride channel	NA	NA	NA	NA	NA
VEC80167.1|2190443_2191058_-	anaerobic dimethyl sulfoxide reductase maturation protein (twin-arginine leader-binding protein)	NA	A0A077SLS7	Escherichia_phage	36.3	8.7e-29
VEC80169.1|2191100_2191955_-	putative dimethyl sulfoxide reductase, anchor subunit	NA	NA	NA	NA	NA
VEC80171.1|2191956_2192574_-	anaerobic dimethyl sulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
VEC80173.1|2192584_2194981_-	putative dimethyl sulfoxide reductase, olydopterin dinucleotide binding subunit	NA	A0A077SK27	Escherichia_phage	48.6	4.8e-208
VEC80175.1|2195068_2197495_-	putative dimethyl sulfoxide reductase, oxidoreductase subunit	NA	A0A077SK27	Escherichia_phage	49.2	7.7e-214
VEC80177.1|2197693_2197999_-	protein	NA	NA	NA	NA	NA
VEC80179.1|2198070_2198817_+	lipoprotein	NA	NA	NA	NA	NA
VEC80181.1|2198819_2199380_-	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
VEC80183.1|2199414_2199756_-	protein	NA	NA	NA	NA	NA
VEC80185.1|2199890_2200217_+	inner membrane protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
VEC80187.1|2200422_2201637_+	starvation sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
VEC80189.1|2201648_2202668_+	dehydrogenase	NA	E3SJ82	Synechococcus_phage	26.2	4.3e-17
VEC80191.1|2202855_2204136_-|integrase	defective integrase; Qin prophage	integrase	B6DZ48	Enterobacteria_phage	62.1	3.3e-155
VEC80193.1|2204170_2204407_-	putative excisionase	NA	S4TND0	Salmonella_phage	50.7	6.1e-15
VEC80195.1|2204494_2206126_-	Exonuclease RNase T and DNA polymerase III	NA	A0A192Y6E0	Salmonella_phage	56.7	5.6e-59
VEC80197.1|2206164_2206533_+|transposase	transposase IS3/IS911 family protein	transposase	NA	NA	NA	NA
VEC80199.1|2206489_2207641_+|transposase	IS30 transposase encoded within prophage CP-933T	transposase	W5R8L2	Staphylococcus_phage	35.7	1.3e-41
VEC80201.1|2207725_2208544_+|transposase	IS600 orfAB' transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	45.2	1.2e-65
VEC80203.1|2208568_2208883_-	Exonuclease RNase T and DNA polymerase III	NA	NA	NA	NA	NA
VEC80205.1|2209204_2209561_+	putative methyltransferase	NA	H9C170	Pectobacterium_phage	69.6	1.6e-38
VEC80207.1|2210713_2210893_+	membrane protein	NA	NA	NA	NA	NA
2211139:2211153	attL	GGAGAAGCAGGCTAT	NA	NA	NA	NA
VEC80209.1|2211227_2212541_+|integrase,transposase	putative integrase/transposase	integrase,transposase	NA	NA	NA	NA
VEC80211.1|2212977_2213310_-	Qin prophage protein	NA	NA	NA	NA	NA
VEC80213.1|2213842_2214082_+	antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
VEC80215.1|2214081_2214369_+	toxin of the RelE-RelB toxin-antitoxin system	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
VEC80217.1|2214440_2214596_+	putative host cell-killing modulation protein	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
2214428:2214442	attR	GGAGAAGCAGGCTAT	NA	NA	NA	NA
VEC80219.1|2214812_2215064_+	putative prophage protein	NA	NA	NA	NA	NA
VEC80221.1|2215410_2216460_+	putative prophage protein	NA	A0A291AWV9	Escherichia_phage	57.3	1.3e-112
VEC80223.1|2216473_2217226_+	lambdoid prophage Qin antitermination protein Q-like protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
VEC80225.1|2217647_2217860_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
VEC80227.1|2218977_2219097_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC80229.1|2219138_2219345_+|lysis	phage lysis protein	lysis	A5LH82	Enterobacteria_phage	94.1	4.5e-30
VEC80231.1|2219349_2219661_+	Qin prophage protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
VEC80233.1|2219657_2220191_+	prophage lysozyme (endolysin)	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
VEC80235.1|2220187_2220685_+	Qin prophage protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
VEC80237.1|2221933_2222107_+	GnsA/GnsB family transcriptional regulator	NA	NA	NA	NA	NA
VEC80239.1|2222258_2222669_-	Qin prophage	NA	C6ZCX4	Enterobacteria_phage	79.4	2.5e-56
VEC80241.1|2223348_2223894_+	DNA packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.2	9.5e-88
VEC80243.1|2223890_2224178_+|tail	Putative tail component of prophage	tail	A0A291AWT4	Escherichia_phage	98.9	1.4e-42
VEC80245.1|2224174_2224453_+|tail	Prophage tail fiber domain protein	tail	NA	NA	NA	NA
VEC80247.1|2225125_2225716_-	putative DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	39.3	1.5e-25
VEC80249.1|2226032_2226266_-	Qin prophage DNA-binding transcriptional regulator	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
VEC80251.1|2227051_2228335_+	metabolite transport protein YdfJ	NA	NA	NA	NA	NA
VEC80253.1|2228423_2229884_+	putative sugar dehydrogenase	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	1.5e-42
>prophage 5
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	2427300	2459622	4594692	terminase,tail,integrase,transposase,tRNA,lysis	Escherichia_phage(54.55%)	43	2418472:2418486	2458783:2458797
2418472:2418486	attL	CAGAAAAAAGCGCGC	NA	NA	NA	NA
VEC80585.1|2427300_2428962_-|tail	phage tail domain-containing protein	tail	X2KTY7	Enterobacteria_phage	65.0	7.2e-171
VEC80587.1|2429167_2429782_-|terminase	terminase small subunit	terminase	A0A0U2RXW9	Escherichia_phage	82.4	2.8e-51
VEC80589.1|2429785_2429995_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC80591.1|2429972_2430905_-	Uncharacterised protein	NA	A0A1B1INP7	uncultured_Mediterranean_phage	54.9	1.4e-83
VEC80593.1|2430897_2431689_-	ParB-like nuclease	NA	R4TG31	Halovirus	40.2	2.8e-48
VEC80595.1|2431826_2433251_-	Rac prophage; potassium transporter subunit	NA	NA	NA	NA	NA
VEC80597.1|2433421_2433727_-|lysis	lysis protein	lysis	A0A0K2FJD0	Enterobacteria_phage	93.9	2.3e-43
VEC80599.1|2433753_2433885_-	Putative endopeptidase	NA	A0A2I6TCF9	Escherichia_phage	94.9	1.8e-13
VEC80601.1|2433881_2434358_-	phage endolysin	NA	K7PKV2	Enterobacteria_phage	96.2	2.3e-85
VEC80603.1|2434361_2434703_-	Holin	NA	Q8SBE1	Shigella_phage	90.1	6.2e-53
VEC80605.1|2434920_2435082_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC80607.1|2435050_2435620_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC80609.1|2435841_2436384_-	antitermination protein	NA	A0A0U2S606	Escherichia_phage	74.6	1.1e-75
VEC80611.1|2436380_2436671_-	phage protein	NA	A0A0U2KD41	Escherichia_phage	89.6	3.3e-47
VEC80613.1|2436670_2437270_-	phage protein	NA	A0A0U2RT94	Escherichia_phage	93.0	1.6e-107
VEC80615.1|2437735_2437888_-	regulatory protein MokC for HokC	NA	A0A0U2QV81	Escherichia_phage	83.7	5.6e-14
VEC80617.1|2438036_2439866_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEC80619.1|2439889_2440930_+	modification methylase	NA	A0A0R6PG08	Moraxella_phage	38.8	3.8e-61
VEC80621.1|2440963_2441395_-	putative prophage protein	NA	A0A0U2QQN3	Escherichia_phage	89.1	5.4e-62
VEC80623.1|2441410_2442172_-	transcription regulatory protein	NA	A0A0U2SAW4	Escherichia_phage	87.7	2.0e-115
VEC80625.1|2442194_2442941_-	putative phage DNA replication protein	NA	V5UQI5	Shigella_phage	78.9	3.8e-111
VEC80627.1|2442947_2443700_-	phage protein	NA	A0A0U2RT81	Escherichia_phage	81.0	4.4e-51
VEC80629.1|2443771_2444071_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC80632.1|2444067_2444934_+|transposase	IS3 element transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
VEC80634.1|2445078_2445501_-	Protein of uncharacterised function (DUF1019)	NA	A0A0U2RXZ9	Escherichia_phage	95.0	1.5e-69
VEC80636.1|2445523_2445820_-	Rac prophage; putative DNA-binding transcriptional regulator	NA	A0A0R6PH31	Moraxella_phage	44.9	9.6e-10
VEC80638.1|2445943_2446420_+	Rac prophage; putative DNA-binding transcriptional regulator	NA	A0A2D1GNH0	Pseudomonas_phage	53.4	2.2e-11
VEC80640.1|2446728_2446863_+	Rac prophage protein	NA	NA	NA	NA	NA
VEC80642.1|2446873_2447029_+	Rac prophage; predicted protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
VEC80644.1|2447025_2447637_-	prophage CP-933R superinfection exclusion protein	NA	NA	NA	NA	NA
VEC80646.1|2447955_2448177_+	FtsZ inhibitor protein	NA	A0A0U2RTC4	Escherichia_phage	98.6	2.0e-36
VEC80648.1|2448176_2448347_+	Rac prophage; zinc-binding protein	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
VEC80650.1|2448421_2448697_+	putative bacteriophage protein	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
VEC80652.1|2448798_2451399_+	exonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	63.5	3.9e-248
VEC80654.1|2451391_2452201_+	recombination and repair protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.1	4.4e-105
VEC80656.1|2452444_2452654_+	gydaC	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
VEC80658.1|2452732_2452948_+	excisionase	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
VEC80660.1|2452949_2454185_+|integrase	phage integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.8	5.5e-240
VEC80662.1|2454236_2455172_+|tRNA	C32 tRNA thiolase	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
VEC80664.1|2455300_2456674_-	ATP-independent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
VEC80666.1|2456703_2456877_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC80668.1|2457151_2458135_-	zinc transport protein	NA	NA	NA	NA	NA
VEC80670.1|2458389_2459622_+	putative signaling protein	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
2458783:2458797	attR	GCGCGCTTTTTTCTG	NA	NA	NA	NA
>prophage 6
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	2652236	2663554	4594692	integrase	Phage_21(27.27%)	13	2654635:2654648	2668897:2668910
VEC81035.1|2652236_2652389_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.0	1.4e-20
VEC81037.1|2653101_2654223_-	5-methylcytosine-specific restriction enzyme McrBC subunit McrC	NA	NA	NA	NA	NA
VEC81039.1|2654219_2656175_-	5-methylcytosine-specific restriction enzyme subunit McrB	NA	K4I1H4	Acidithiobacillus_phage	28.6	9.8e-26
2654635:2654648	attL	ATTTTTTCATCAGC	NA	NA	NA	NA
VEC81041.1|2657042_2657339_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	100.0	1.6e-49
VEC81043.1|2657344_2658130_+	bacteriophage recombination protein	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
VEC81045.1|2658126_2658807_+	exonuclease	NA	A0A0N6WET1	Escherichia_phage	99.6	3.5e-132
VEC81047.1|2658803_2658962_+	phage protein	NA	M1FJ61	Enterobacteria_phage	88.5	6.4e-21
VEC81049.1|2658958_2660023_+	DNA thiolation protein; phage protein	NA	T1SBJ4	Salmonella_phage	65.1	2.0e-134
VEC81051.1|2660176_2660395_+	ybl16	NA	M1FQT7	Enterobacteria_phage	95.8	1.8e-34
VEC81053.1|2660442_2660682_+	bacteriophage protein	NA	M1FPC8	Enterobacteria_phage	94.9	3.9e-38
VEC81055.1|2660821_2661058_+	excisionase	NA	NA	NA	NA	NA
VEC81057.1|2661047_2662190_+|integrase	prophage lambda integrase	integrase	O21929	Phage_21	99.7	6.9e-205
VEC81059.1|2662303_2663554_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
2668897:2668910	attR	GCTGATGAAAAAAT	NA	NA	NA	NA
>prophage 7
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	3050993	3071393	4594692	terminase,integrase,lysis	Enterobacteria_phage(68.0%)	31	3044098:3044112	3079879:3079893
3044098:3044112	attL	CAGGCCATCTTCCAG	NA	NA	NA	NA
VEC82214.1|3050993_3051347_+	IS2 ORF2	NA	Q9ZXG3	Shigella_phage	69.0	2.4e-39
VEC82217.1|3051388_3052132_-	putative AraC-type regulatory protein encoded in prophage CP-933H	NA	NA	NA	NA	NA
VEC82220.1|3054217_3055402_-	Phage protein	NA	K7PHC9	Enterobacteria_phage	71.4	2.3e-38
VEC82223.1|3055403_3056465_-|terminase	terminase GpA	terminase	A0A0K2FJ14	Enterobacteria_phage	98.9	1.7e-213
VEC82226.1|3056439_3056985_-	prophage qsr' DNA packaging protein NU1-like protein	NA	A0A0K2FIG2	Enterobacteria_phage	99.4	4.7e-95
VEC82229.1|3057732_3057939_-	DLP12 prophage; predicted protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
VEC82232.1|3058224_3058635_+	putative envelope protein	NA	C6ZCX4	Enterobacteria_phage	99.3	9.4e-72
VEC82235.1|3058925_3059219_+	lambdoid prophage DLP12 Bor-like protein	NA	K7PL54	Enterobacteria_phage	100.0	4.0e-48
VEC82238.1|3059250_3059712_-	Rz endopeptidase from lambdoid prophage DLP12	NA	A0A0K2FJD0	Enterobacteria_phage	98.7	4.6e-75
VEC82241.1|3059708_3060206_-	phage lysozome	NA	M1FJA0	Enterobacteria_phage	97.6	1.9e-90
VEC82244.1|3060205_3060421_-|lysis	phage lysis protein	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
VEC82247.1|3061008_3062091_+	outer membrane porin protein NmpC	NA	Q1MVN1	Enterobacteria_phage	76.3	8.9e-154
VEC82250.1|3062279_3062663_-	lambdoid prophage DLP12 antitermination protein Q	NA	A0A088CD47	Shigella_phage	83.3	4.4e-55
VEC82253.1|3062885_3063248_-	endodeoxyribonuclease RUS	NA	K7PM48	Enterobacteria_phage	96.5	7.3e-60
VEC82255.1|3063244_3063535_-	DLP12 prophage	NA	K7PGZ6	Enterobacteria_phage	93.8	4.3e-47
VEC82258.1|3063527_3063698_-	prophage protein NinE	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
VEC82261.1|3063697_3064153_-	DLP12 prophage; DNA base-flipping protein	NA	I6PD71	Cronobacter_phage	67.5	1.4e-60
VEC82264.1|3064343_3064796_-	17 kDa surface antigen	NA	NA	NA	NA	NA
VEC82267.1|3064792_3065353_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC82270.1|3065609_3065801_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC82273.1|3066107_3066632_+	exonuclease	NA	A0A0P0ZCD4	Stx2-converting_phage	99.4	6.8e-99
VEC82276.1|3066628_3066811_+	phage protein	NA	A0A1U8QQC1	Enterobacteria_phage	100.0	1.6e-28
VEC82279.1|3066783_3066975_+	phage protein	NA	A0A0P0ZC67	Stx2-converting_phage	96.8	2.8e-26
VEC82282.1|3066985_3067267_+	ybl17	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
VEC82285.1|3067365_3067587_+	putative C4-type zinc finger protein	NA	A0A0N7C211	Escherichia_phage	98.6	6.4e-35
VEC82288.1|3067583_3067835_+	putative bacteriophage protein	NA	A0A0K2FJF6	Enterobacteria_phage	92.3	1.3e-31
VEC82291.1|3068133_3068748_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC82294.1|3069041_3069161_+	phage protein	NA	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	79.5	8.0e-08
VEC82297.1|3069408_3069837_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC82300.1|3069919_3070087_+	Uncharacterised protein	NA	A0A0K2FJ46	Enterobacteria_phage	98.2	1.3e-27
VEC82303.1|3070322_3071393_+|integrase	putative integrase	integrase	K7P6P6	Enterobacteria_phage	99.4	3.3e-201
3079879:3079893	attR	CAGGCCATCTTCCAG	NA	NA	NA	NA
>prophage 8
LR134231	Escherichia coli strain NCTC9087 genome assembly, chromosome: 1	4594692	3959637	3980763	4594692	integrase,transposase	Shigella_phage(36.36%)	23	3973537:3973564	3980851:3980878
VEC84453.1|3959637_3959847_-|transposase	IS1 transposase	transposase	U5P0U6	Shigella_phage	98.6	2.2e-32
VEC84455.1|3960626_3961148_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
VEC84457.1|3961144_3962098_+	iron(III) dicitrate sensor protein	NA	NA	NA	NA	NA
VEC84459.1|3962184_3964509_+	iron(III) dicitrate TonB-dependent receptor	NA	NA	NA	NA	NA
VEC84461.1|3964553_3965456_+	iron-dicitrate transporter substrate-binding subunit	NA	NA	NA	NA	NA
VEC84463.1|3965452_3966451_+	iron(III) dicitrate transport system, permease protein	NA	NA	NA	NA	NA
VEC84465.1|3966447_3967404_+	iron-dicitrate transporter subunit FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.1	1.1e-17
VEC84467.1|3967404_3968172_+	iron(III) dicitrate transport system, ATP-binding protein	NA	G3M9Y6	Bacillus_virus	24.8	6.4e-13
VEC84469.1|3968729_3968987_-	KpLE2 phage-like element	NA	NA	NA	NA	NA
VEC84471.1|3969069_3969312_-|transposase	putative transposase	transposase	Q716C2	Shigella_phage	92.4	4.7e-39
VEC84473.1|3969308_3969722_-|transposase	transposase ORF B (fragment), IS911	transposase	Q716C2	Shigella_phage	95.6	1.5e-61
VEC84475.1|3970038_3971190_+|transposase	IS30 transposase encoded within prophage CP-933T	transposase	W5R8L2	Staphylococcus_phage	36.0	2.6e-42
VEC84477.1|3971109_3971460_-|transposase	transposase ORF A, IS3 family	transposase	Q716C1	Shigella_phage	97.7	8.9e-39
VEC84479.1|3971560_3972133_+	lysogenic conversion protein from Bacteriophage P2-EC53	NA	Q858R9	Enterobacteria_phage	69.0	2.2e-71
VEC84481.1|3972181_3973006_-	Uncharacterised protein	NA	L7TR00	Rhizobium_phage	35.5	3.0e-16
3973537:3973564	attL	ACTTGGTGCCGAAGGCCGGACTCGAACC	NA	NA	NA	NA
VEC84483.1|3974043_3974601_-	transcriptional regulator	NA	NA	NA	NA	NA
VEC84485.1|3974748_3975243_+	putative transmembrane protein	NA	NA	NA	NA	NA
VEC84487.1|3975303_3976149_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC84489.1|3976162_3976723_-	resolvase	NA	A0A219Y912	Aeromonas_phage	39.9	4.2e-22
VEC84491.1|3976915_3977008_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC84493.1|3977052_3977382_+	Uncharacterized protein conserved in bacteria	NA	A0A1V0EBT6	Caulobacter_phage	35.4	2.0e-11
VEC84495.1|3978387_3978720_+	nipsnap family protein	NA	NA	NA	NA	NA
VEC84497.1|3978852_3980763_-|integrase	phage integrase site specific recombinase	integrase	NA	NA	NA	NA
3980851:3980878	attR	ACTTGGTGCCGAAGGCCGGACTCGAACC	NA	NA	NA	NA
