assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	1	1085594-1086720	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	29,29,29,28	0	0	NA	NA	I-E:I-E:I-E:I-E	16,18,18,16	18	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA|47aa|up_1|LR134228.1_1084303_1084444_-,NA	NA|434aa|up_9|LR134228.1_1075000_1076302_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|LR134228.1_1076349_1078584_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|LR134228.1_1078661_1078910_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|LR134228.1_1078909_1079245_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|LR134228.1_1079315_1080107_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|LR134228.1_1080334_1081972_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|LR134228.1_1082059_1083358_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|LR134228.1_1083417_1084290_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|LR134228.1_1084303_1084444_-	NA	NA|224aa|up_0|LR134228.1_1084582_1085254_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|LR134228.1_1087358_1088837_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|LR134228.1_1088863_1090141_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|LR134228.1_1090459_1091245_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|LR134228.1_1091314_1092769_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|LR134228.1_1092790_1094200_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|LR134228.1_1094177_1094957_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|LR134228.1_1094953_1095814_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|LR134228.1_1095961_1096537_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|LR134228.1_1096553_1096814_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|LR134228.1_1096804_1098076_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	2	1112925-1113868	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GNGTTCCCCGCGTCAGCGGGGATAAACCG,GTTCCCCGCGTCAGCGGGGATAAACCG	29,29,27	0	0	NA	NA	I-E:I-E:I-E	15,15,15	15	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|571aa|up_9|LR134228.1_1100633_1102346_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|LR134228.1_1102419_1103154_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|899aa|up_7|LR134228.1_1103634_1106331_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|521aa|up_6|LR134228.1_1106941_1108504_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|201aa|up_5|LR134228.1_1108493_1109096_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|353aa|up_4|LR134228.1_1109118_1110177_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|241aa|up_3|LR134228.1_1110189_1110912_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|236aa|up_2|LR134228.1_1110911_1111619_+	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|up_1|LR134228.1_1111615_1112533_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|LR134228.1_1112534_1112819_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|LR134228.1_1113949_1114987_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134228.1_1115238_1116147_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|LR134228.1_1116148_1117576_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LR134228.1_1117575_1118181_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134228.1_1118230_1118554_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134228.1_1118747_1119059_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134228.1_1119077_1119788_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134228.1_1119787_1120267_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134228.1_1120263_1121313_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LR134228.1_1121293_1122055_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	3	1614323-1614440	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|300aa|up_9|LR134228.1_1603806_1604706_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|LR134228.1_1604898_1606089_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|LR134228.1_1606085_1607345_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|LR134228.1_1607334_1608963_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|LR134228.1_1609235_1610594_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|LR134228.1_1610598_1611675_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|LR134228.1_1611716_1611923_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|LR134228.1_1612137_1612788_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|LR134228.1_1612841_1613096_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|LR134228.1_1613095_1614226_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|LR134228.1_1614459_1616745_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1235aa|down_1|LR134228.1_1617488_1621193_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|LR134228.1_1621320_1622043_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|LR134228.1_1622189_1624817_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|LR134228.1_1624965_1626654_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|LR134228.1_1626650_1627274_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|LR134228.1_1627417_1631812_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|LR134228.1_1631812_1633462_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|LR134228.1_1633466_1634243_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|LR134228.1_1634316_1635501_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	4	2265963-2266086	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|471aa|up_9|LR134228.1_2254105_2255518_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|LR134228.1_2256074_2256284_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|LR134228.1_2256738_2257365_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|LR134228.1_2257385_2259488_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|LR134228.1_2259500_2260139_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|LR134228.1_2260202_2260871_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|197aa|up_3|LR134228.1_2260867_2261458_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_2|LR134228.1_2261703_2262468_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|393aa|up_1|LR134228.1_2262479_2263658_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|112aa|up_0|LR134228.1_2265061_2265397_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134228.1_2266400_2267657_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134228.1_2267697_2269071_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134228.1_2269285_2269927_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134228.1_2269966_2271115_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134228.1_2271405_2272617_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134228.1_2272729_2273662_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134228.1_2273658_2274684_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134228.1_2275237_2276407_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134228.1_2276641_2277223_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|LR134228.1_2277350_2278166_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	6	3175468-3175673	6,3,4	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAACG	28,28,29	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|431aa|up_9|LR134228.1_3160552_3161845_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|LR134228.1_3161935_3163279_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|LR134228.1_3163289_3163901_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1343aa|up_6|LR134228.1_3164055_3168084_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|LR134228.1_3168218_3168713_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|LR134228.1_3169257_3170223_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|LR134228.1_3170345_3172112_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|LR134228.1_3172112_3173834_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|LR134228.1_3173875_3174580_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|LR134228.1_3174864_3175083_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|LR134228.1_3175883_3178160_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|LR134228.1_3178190_3178511_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|LR134228.1_3178833_3179058_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|LR134228.1_3179130_3181077_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|LR134228.1_3181073_3182189_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|331aa|down_5|LR134228.1_3182303_3183296_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|LR134228.1_3183292_3184951_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|LR134228.1_3185374_3186070_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|LR134228.1_3186564_3187464_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|LR134228.1_3187607_3189260_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	7	3300575-3300714	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	47	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|303aa|up_9|LR134228.1_3289860_3290769_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_8|LR134228.1_3290960_3292982_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_7|LR134228.1_3293560_3294238_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_6|LR134228.1_3294230_3294986_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_5|LR134228.1_3294972_3296127_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_4|LR134228.1_3296123_3297164_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|114aa|up_3|LR134228.1_3297250_3297592_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|311aa|up_2|LR134228.1_3297606_3298539_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|LR134228.1_3298597_3299074_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|LR134228.1_3299225_3300509_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|LR134228.1_3300742_3303004_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|102aa|down_1|LR134228.1_3303186_3303492_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|327aa|down_2|LR134228.1_3303638_3304619_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_3|LR134228.1_3304694_3305747_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_4|LR134228.1_3305930_3306884_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_5|LR134228.1_3306924_3307920_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_6|LR134228.1_3308074_3308893_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_7|LR134228.1_3308893_3309952_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_8|LR134228.1_3309954_3310644_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_9|LR134228.1_3310643_3311417_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	8	3589827-3589923	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|231aa|up_9|LR134228.1_3581622_3582315_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|LR134228.1_3582534_3583077_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|LR134228.1_3583547_3584414_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|LR134228.1_3584415_3584628_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|LR134228.1_3584735_3585257_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|LR134228.1_3585292_3586678_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|LR134228.1_3586851_3587346_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|LR134228.1_3587348_3588071_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|LR134228.1_3588188_3588698_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|LR134228.1_3588694_3589762_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|LR134228.1_3589956_3590850_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|LR134228.1_3590846_3591662_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|LR134228.1_3591672_3592932_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|LR134228.1_3592941_3594609_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|LR134228.1_3594925_3595975_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|LR134228.1_3595996_3597232_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|LR134228.1_3597242_3598028_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|LR134228.1_3598255_3599401_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|LR134228.1_3599422_3600724_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|LR134228.1_3600780_3602142_-	PRK08044, PRK08044, allantoinase AllB
GCA_900636125.1_38977_C01	LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	9	4102231-4102372	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	NA,NA	NA|96aa|up_9|LR134228.1_4091222_4091510_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|LR134228.1_4091506_4092793_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|LR134228.1_4092843_4093785_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|LR134228.1_4093799_4094570_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|LR134228.1_4095042_4096557_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|LR134228.1_4096587_4097730_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|LR134228.1_4097858_4099076_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|LR134228.1_4099149_4100703_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|LR134228.1_4100811_4101597_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|LR134228.1_4101602_4102193_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|LR134228.1_4102401_4102797_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|LR134228.1_4103058_4106280_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|LR134228.1_4106297_4107446_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|LR134228.1_4107901_4108723_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|LR134228.1_4108889_4109804_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|LR134228.1_4109869_4110820_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|LR134228.1_4110821_4111271_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|LR134228.1_4111395_4111890_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|LR134228.1_4111889_4114706_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|LR134228.1_4114748_4115690_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
