The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	20979	33791	403436	integrase,protease,transposase	uncultured_Caudovirales_phage(40.0%)	14	19230:19251	40523:40544
19230:19251	attL	GCGGAGTGTGGCTCGACGACTG	NA	NA	NA	NA
VEC46251.1|20979_22197_+|integrase	integrase core domain-containing protein	integrase	NA	NA	NA	NA
VEC46252.1|22080_22368_-	addiction module toxin, RelE/StbE family	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
VEC46253.1|22367_22607_-	bifunctional antitoxin/transcriptional repressor RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
VEC46254.1|22869_23625_-	cation efflux protein	NA	NA	NA	NA	NA
VEC46255.1|23686_23791_-	cation efflux protein	NA	NA	NA	NA	NA
VEC46256.1|25247_25889_-|transposase	transposase IS116/IS110/IS902 family protein	transposase	NA	NA	NA	NA
VEC46257.1|25968_26274_-|transposase	transposase IS116/IS110/IS902 family protein	transposase	NA	NA	NA	NA
VEC46258.1|26694_27360_-|transposase	transposase	transposase	NA	NA	NA	NA
VEC46259.1|27383_28034_-|transposase	transposase	transposase	NA	NA	NA	NA
VEC46260.1|28855_29731_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46261.1|29822_30824_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46262.1|30973_32014_-|protease	ATP-dependent metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	35.2	9.5e-20
VEC46263.1|32622_32925_+|transposase	transposase IS3/IS911 family protein	transposase	Q716C1	Shigella_phage	98.0	1.2e-44
VEC46264.1|33137_33791_+|integrase	integrase catalytic subunit	integrase	Q716C2	Shigella_phage	96.3	7.3e-127
40523:40544	attR	GCGGAGTGTGGCTCGACGACTG	NA	NA	NA	NA
>prophage 2
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	44822	103976	403436	integrase,transposase,tRNA	uncultured_Caudovirales_phage(27.59%)	67	89827:89841	110481:110495
VEC46279.1|44822_45524_-	DNA methylase family protein	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
VEC46280.1|45960_46191_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46281.1|46253_46925_-	Mediator of plasmid stability	NA	NA	NA	NA	NA
VEC46282.1|46927_47899_-	stable plasmid inheritance protein A	NA	A0A222YXF2	Escherichia_phage	46.5	2.4e-73
VEC46283.1|48131_48497_+	SOS mutagenesis and repair protein UmuD	NA	F1C5A6	Cronobacter_phage	54.5	2.0e-20
VEC46284.1|48563_49250_+	SOS mutagenesis and repair protein UmuC	NA	F1C5A5	Cronobacter_phage	61.6	1.9e-69
VEC46285.1|49909_50071_-	ParB family	NA	Q38420	Escherichia_phage	54.7	1.8e-10
VEC46286.1|50380_50884_-	parB-like partition protein	NA	Q38420	Escherichia_phage	52.1	4.1e-37
VEC46287.1|50883_51852_-	plasmid-partitioning protein SopA	NA	A0A077SL49	Escherichia_phage	73.7	4.3e-139
VEC46288.1|51808_52087_-	Plasmid partition protein A	NA	Q1MVJ3	Enterobacteria_phage	46.7	1.2e-06
VEC46289.1|52702_52993_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46290.1|53282_54038_-	Replication initiation protein	NA	I3WF20	Macacine_betaherpesvirus	96.0	2.0e-136
VEC46291.1|54686_54782_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46292.1|54910_55168_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46293.1|55225_56005_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
VEC46294.1|56312_57194_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46295.1|57379_57496_-	plasmid maintenance protein CcdB	NA	NA	NA	NA	NA
VEC46296.1|57495_57684_-	plasmid maintenance protein CcdB	NA	NA	NA	NA	NA
VEC46297.1|57720_57903_-	plasmid maintenance protein CcdA	NA	NA	NA	NA	NA
VEC46298.1|58463_59396_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46299.1|59640_59754_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46300.1|59915_60335_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46301.1|60706_60988_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46302.1|61150_61402_+|transposase	transposase IS3/IS911 family protein	transposase	Q716C1	Shigella_phage	80.3	1.0e-20
VEC46303.1|61691_61994_+|integrase	integrase catalytic subunit	integrase	Q716C2	Shigella_phage	98.0	1.0e-54
VEC46304.1|62321_62456_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46305.1|62731_62962_+	Virulence-associated protein vagC	NA	NA	NA	NA	NA
VEC46306.1|62973_63318_+|tRNA	tRNA(fMet)-specific endonuclease VapC	tRNA	NA	NA	NA	NA
VEC46307.1|63716_63935_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46308.1|65657_66524_+	secretion protein HlyD family protein	NA	NA	NA	NA	NA
VEC46309.1|66520_66910_+	secretion protein HlyD family protein	NA	NA	NA	NA	NA
VEC46310.1|66909_69075_+	ABC transporter-like protein	NA	W8CYL7	Bacillus_phage	26.1	4.9e-26
VEC46311.1|69128_69599_-|transposase	transposase IS4 family protein	transposase	NA	NA	NA	NA
VEC46312.1|70571_70814_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46313.1|71575_71728_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46314.1|71672_71873_-|transposase	IS3 family transposase orfA	transposase	NA	NA	NA	NA
VEC46315.1|72117_73476_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC46316.1|73524_73920_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC46317.1|74108_75506_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC46318.1|75745_76024_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46319.1|76443_76926_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46320.1|77050_78694_-	phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	25.0	1.5e-22
VEC46321.1|78807_81255_-	glycogen/starch/alpha-glucan phosphorylase	NA	A0A140XAG6	Dickeya_phage	69.2	6.1e-25
VEC46322.1|81273_82680_-	Glycogen synthase, ADP-glucose transglucosylase	NA	NA	NA	NA	NA
VEC46323.1|82795_84079_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
VEC46324.1|84208_84502_-	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type	NA	NA	NA	NA	NA
VEC46325.1|84464_85907_-	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type	NA	NA	NA	NA	NA
VEC46326.1|85851_86403_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA	NA
VEC46327.1|86775_87744_+|transposase	transposase	transposase	A0A1B0VFY5	Salmonella_phage	99.1	1.0e-185
VEC46328.1|88621_89626_+	bifunctional antitoxin/transcriptional repressor RelB	NA	NA	NA	NA	NA
VEC46329.1|89622_89865_+	Uncharacterised protein	NA	NA	NA	NA	NA
89827:89841	attL	AAAAACCACGTTAAG	NA	NA	NA	NA
VEC46330.1|89836_91030_-|transposase	transposase	transposase	Q1MVP5	Enterobacteria_phage	76.1	1.0e-174
VEC46331.1|90998_92414_-|transposase	transposon Tn3 transposase	transposase	Q1MVP5	Enterobacteria_phage	51.7	1.1e-132
VEC46332.1|92376_92847_-|transposase	transposon Tn3 transposase	transposase	Q1MVP5	Enterobacteria_phage	62.3	6.2e-43
VEC46333.1|93007_93565_+|integrase	Resolvase/integrase Bin	integrase	Q1MVP4	Enterobacteria_phage	47.2	8.4e-39
VEC46334.1|93697_94045_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
VEC46335.1|94384_95566_-	putative sodium-proton antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	65.9	1.8e-123
VEC46336.1|95807_96182_-	putative CrcB-like protein	NA	A0A2H4J148	uncultured_Caudovirales_phage	56.0	4.5e-28
VEC46337.1|96710_97907_+	Arabinose efflux permease	NA	NA	NA	NA	NA
VEC46338.1|97978_98806_-	Universal stress protein family	NA	NA	NA	NA	NA
VEC46339.1|98824_99058_-	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	70.4	7.0e-24
VEC46340.1|99035_100304_-	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	75.6	6.8e-161
VEC46341.1|100788_101142_+	Arsenical resistance operon repressor	NA	A0A2H4J145	uncultured_Caudovirales_phage	57.1	5.9e-22
VEC46342.1|101237_102521_+	Arsenical pump membrane protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	74.6	2.9e-175
VEC46343.1|102570_102999_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	2.3e-52
VEC46344.1|103056_103359_-	putative arsenic resistance protein	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	84.0	6.3e-41
VEC46345.1|103418_103976_-	resolvase domain-containing protein	NA	A0A0C4UR34	Shigella_phage	63.2	3.3e-59
110481:110495	attR	CTTAACGTGGTTTTT	NA	NA	NA	NA
>prophage 3
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	169946	235336	403436	integrase,protease,transposase	Bacillus_phage(21.74%)	71	170226:170240	188996:189010
VEC46424.1|169946_171164_+|integrase	integrase core domain-containing protein	integrase	NA	NA	NA	NA
170226:170240	attL	ATCAAGGAAATCAGG	NA	NA	NA	NA
VEC46425.1|171047_171335_-	addiction module toxin, RelE/StbE family	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
VEC46426.1|171334_171574_-	bifunctional antitoxin/transcriptional repressor RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
VEC46427.1|171836_172760_-	cation efflux protein	NA	NA	NA	NA	NA
VEC46428.1|172959_173532_-	Cytochrome b(N-terminal)/b6/petB	NA	NA	NA	NA	NA
VEC46429.1|174007_175246_-|transposase	transposase IS116/IS110/IS902 family protein	transposase	A0A0U3ULR1	Bacillus_phage	22.4	2.4e-09
VEC46430.1|175666_177007_-|transposase	transposase	transposase	NA	NA	NA	NA
VEC46431.1|177459_178176_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46432.1|178349_179969_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46433.1|179946_180987_-|protease	ATP-dependent metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	35.2	9.5e-20
VEC46434.1|181595_181898_+|transposase	transposase IS3/IS911 family protein	transposase	Q716C1	Shigella_phage	98.0	1.2e-44
VEC46435.1|182110_182764_+|integrase	integrase catalytic subunit	integrase	Q716C2	Shigella_phage	96.3	7.3e-127
VEC46436.1|182760_183348_+|transposase	putative IS903 transposase	transposase	Q9MCT5	Escherichia_phage	97.4	1.1e-105
VEC46437.1|183373_183667_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46438.1|183680_184469_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46439.1|184468_184933_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46440.1|185525_185960_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46441.1|185977_186946_+|transposase	transposase	transposase	A0A1B0VFY5	Salmonella_phage	91.9	1.3e-172
VEC46442.1|187436_188351_+	HNH endonuclease	NA	NA	NA	NA	NA
VEC46443.1|188351_188477_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46444.1|188536_188887_-	Uncharacterized protein conserved in bacteria	NA	A0A218MND9	uncultured_virus	51.4	6.0e-19
VEC46445.1|189034_189466_-	silver binding protein SilE	NA	NA	NA	NA	NA
188996:189010	attR	ATCAAGGAAATCAGG	NA	NA	NA	NA
VEC46446.1|189703_191182_-	sensor kinase CusS	NA	W8CYF6	Bacillus_phage	28.6	6.7e-27
VEC46447.1|191174_191855_-	transcriptional regulatory protein CusR	NA	W8CYM9	Bacillus_phage	35.6	2.1e-31
VEC46448.1|192044_193430_+	Copper/silver efflux system outer membrane protein CusC	NA	NA	NA	NA	NA
VEC46449.1|193458_193812_+	copper/silver efflux system protein CusF	NA	NA	NA	NA	NA
VEC46450.1|193925_195218_+	copper/silver efflux system membrane fusion protein CusB	NA	NA	NA	NA	NA
VEC46451.1|195228_198375_+	cation efflux system protein SilA	NA	S5VTK5	Leptospira_phage	22.6	8.0e-62
VEC46452.1|198461_198902_+	Predicted metal-binding protein	NA	NA	NA	NA	NA
VEC46453.1|199028_201476_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.4	3.8e-83
VEC46454.1|201516_201714_+	Protein of uncharacterised function (DUF2933).	NA	NA	NA	NA	NA
VEC46455.1|201747_202485_-	putative peptidase	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	31.9	1.3e-10
VEC46456.1|202773_203223_-	copper-binding protein PcoE	NA	NA	NA	NA	NA
VEC46457.1|203457_204549_+	copper-resistance protein, CopA family	NA	NA	NA	NA	NA
VEC46458.1|204566_205274_+	copper-resistance protein, CopA family	NA	NA	NA	NA	NA
VEC46459.1|205273_206170_+	Uncharacterized protein involved in copper resistance	NA	NA	NA	NA	NA
VEC46460.1|206209_206590_+	copper resistance protein C	NA	NA	NA	NA	NA
VEC46461.1|206594_207524_+	copper resistance protein D	NA	NA	NA	NA	NA
VEC46462.1|207578_208259_+	two component heavy metal response transcriptional regulator	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
VEC46463.1|208255_209656_+	two-component system, OmpR family, heavy metal sensor histidine kinase CusS	NA	W8CYF6	Bacillus_phage	26.6	2.4e-18
VEC46464.1|210035_210305_+	copper-binding protein pcoE	NA	NA	NA	NA	NA
VEC46465.1|210601_211582_-|transposase	putative transposase	transposase	A0A077SK28	Escherichia_phage	98.8	8.9e-185
VEC46466.1|211578_211875_-	YagP	NA	NA	NA	NA	NA
VEC46467.1|211994_212384_+	Tautomerase enzyme	NA	NA	NA	NA	NA
VEC46468.1|212819_213566_+|transposase	transposase	transposase	Q1MVF0	Enterobacteria_phage	94.7	1.2e-130
VEC46469.1|213773_214781_+	Protein of uncharacterised function (DUF1611)	NA	NA	NA	NA	NA
VEC46470.1|214782_215511_+	L-alanine-DL-glutamate epimerase	NA	NA	NA	NA	NA
VEC46471.1|215507_215747_+	mandelate racemase/muconate lactonizing protein	NA	NA	NA	NA	NA
VEC46472.1|215762_217628_+	glutathione transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.5	1.3e-14
VEC46473.1|217650_218262_+	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein	NA	NA	NA	NA	NA
VEC46474.1|218299_218536_+	diguanylate cyclase	NA	NA	NA	NA	NA
VEC46475.1|218589_218985_+	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein	NA	NA	NA	NA	NA
VEC46476.1|219277_220210_+	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	NA	NA	NA	NA	NA
VEC46477.1|220206_221076_+	glutathione transport system permease protein gsiD	NA	NA	NA	NA	NA
VEC46478.1|221078_222122_+	L-aminopeptidase/D-esterase	NA	NA	NA	NA	NA
VEC46479.1|222118_222940_+	D-aminopeptidase	NA	NA	NA	NA	NA
VEC46480.1|223508_224297_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEC46481.1|224449_224671_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEC46482.1|224993_225134_-|transposase	putative transposase	transposase	Q9MCT5	Escherichia_phage	100.0	1.3e-17
VEC46483.1|226100_226253_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46484.1|226386_226596_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46485.1|226610_226880_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46486.1|227156_227372_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46487.1|227835_228102_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEC46488.1|228813_228954_-|transposase	putative transposase	transposase	Q9MCT5	Escherichia_phage	97.8	8.5e-17
VEC46489.1|229020_229737_-|transposase	transposase	transposase	Q9MCT5	Escherichia_phage	98.6	3.5e-122
VEC46490.1|229829_230609_+	Protein of uncharacterised function (DUF1173)	NA	NA	NA	NA	NA
VEC46491.1|232736_233063_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46492.1|233290_233824_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46493.1|234532_234694_-|transposase	putative transposase	transposase	Q9ZXG3	Shigella_phage	57.8	6.4e-08
VEC46494.1|235225_235336_-|transposase	IS2 transposase orfA	transposase	NA	NA	NA	NA
>prophage 4
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	247462	290019	403436	integrase,protease,transposase	Salmonella_phage(33.33%)	46	250925:250939	290569:290583
VEC46510.1|247462_247966_+|transposase	putative transposase	transposase	U5P0U6	Shigella_phage	97.0	5.9e-92
VEC46511.1|248817_248940_-	COG2801: Transposase and inactivated derivatives	NA	NA	NA	NA	NA
VEC46512.1|249864_250428_+	Cytosine/purine/uracil/thiamine/allantoin permease family protein	NA	NA	NA	NA	NA
VEC46513.1|250372_251272_+	Cytosine/purine/uracil/thiamine/allantoin permease family protein	NA	NA	NA	NA	NA
250925:250939	attL	GCTTTTTCTTCTTTT	NA	NA	NA	NA
VEC46514.1|251907_252087_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46515.1|252074_252605_+	long-chain-fatty-acid--CoA ligase	NA	Q75ZG1	Hepacivirus	33.6	1.2e-13
VEC46516.1|252585_252903_+	AMP-dependent synthetase and ligase	NA	A0A2H4PQM9	Staphylococcus_phage	32.2	5.3e-06
VEC46517.1|252899_253316_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46518.1|253581_253896_+	DSBA-like thioredoxin domain	NA	NA	NA	NA	NA
VEC46519.1|255960_256071_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46520.1|256054_256330_+	protein YaiN	NA	NA	NA	NA	NA
VEC46521.1|256744_257161_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
VEC46522.1|257273_257438_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46523.1|257515_257914_+	bleomycin resistance protein	NA	NA	NA	NA	NA
VEC46524.1|257964_258816_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
VEC46525.1|258843_259095_-	putative resolvase	NA	NA	NA	NA	NA
VEC46526.1|259153_260116_+|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	65.8	1.0e-113
VEC46527.1|260421_261081_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC46528.1|261500_262466_-	membrane protein	NA	NA	NA	NA	NA
VEC46529.1|262462_263281_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	37.8	7.5e-28
VEC46530.1|263285_263948_-	polar amino acid ABC transporter inner membrane subunit	NA	NA	NA	NA	NA
VEC46531.1|263944_264616_-	polar amino acid ABC transporter inner membrane subunit	NA	NA	NA	NA	NA
VEC46532.1|264639_265227_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEC46533.1|265198_265489_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46534.1|265645_266599_+	Glycine cleavage system transcriptional activator GcvA	NA	Q6JIH3	Burkholderia_virus	24.3	1.3e-10
VEC46535.1|266685_267126_+	Creatinase	NA	NA	NA	NA	NA
VEC46536.1|267142_267898_+	peptidase M24	NA	NA	NA	NA	NA
VEC46537.1|268352_269321_-|transposase	transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.4	5.7e-184
VEC46538.1|270911_272582_-	propionate/CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.8	1.5e-35
VEC46539.1|272562_273381_-	monooxygenase, putative	NA	NA	NA	NA	NA
VEC46540.1|273425_273842_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46541.1|274395_274680_-	Selenophosphate synthetase-related proteins	NA	NA	NA	NA	NA
VEC46542.1|274682_275111_-	thiamine monophosphate kinase	NA	NA	NA	NA	NA
VEC46543.1|275172_275667_-	putative N-acetyltransferase, MSMEG_0567 N-terminal domain family	NA	NA	NA	NA	NA
VEC46544.1|275681_276791_-	ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA	NA
VEC46545.1|276750_277752_-	N-carbamoylputrescine amidase	NA	NA	NA	NA	NA
VEC46546.1|277765_278248_-	MSMEG_0572 family protein	NA	NA	NA	NA	NA
VEC46547.1|278614_280015_+	protein YjiR	NA	NA	NA	NA	NA
VEC46548.1|280623_280938_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46549.1|281180_281663_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46550.1|282135_283071_-|protease	outer membrane protease	protease	NA	NA	NA	NA
VEC46551.1|286083_286983_-	initiator RepB protein	NA	A0A1B0VDL5	Salmonella_phage	49.0	6.9e-67
VEC46552.1|287303_288365_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46553.1|288450_288705_-	hemolysin expression-modulating protein	NA	NA	NA	NA	NA
VEC46554.1|288881_289310_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46555.1|289335_290019_+|integrase	Phage integrase family	integrase	NA	NA	NA	NA
290569:290583	attR	GCTTTTTCTTCTTTT	NA	NA	NA	NA
>prophage 5
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	294425	343924	403436	integrase,transposase	uncultured_Caudovirales_phage(14.81%)	55	321293:321352	351660:351908
VEC46565.1|294425_294710_+|transposase	transposase	transposase	U5P4I9	Shigella_phage	40.2	1.4e-10
VEC46566.1|294957_295170_+	ISEch12 OrfA	NA	NA	NA	NA	NA
VEC46567.1|295298_296315_-|transposase	transposase	transposase	NA	NA	NA	NA
VEC46568.1|297180_297486_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46569.1|297543_297894_+	SOS mutagenesis and repair protein UmuC	NA	F1C5A5	Cronobacter_phage	58.8	6.2e-32
VEC46570.1|297972_298125_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46571.1|299055_300027_-	plasmid-partitioning protein SopB	NA	I3WF22	Macacine_betaherpesvirus	86.9	7.0e-150
VEC46572.1|300026_301193_-	plasmid-partitioning protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	97.2	7.5e-223
VEC46573.1|301922_302933_+	initiator RepB protein	NA	J9Q7H0	Salmonella_phage	53.5	1.1e-86
VEC46574.1|303754_304042_-|integrase	integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	56.0	1.3e-19
VEC46575.1|304026_304395_-|integrase	integrase family protein	integrase	NA	NA	NA	NA
VEC46576.1|305777_305894_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46577.1|306048_306468_-|transposase	IS3 family element, transposase orfB	transposase	S5WIU1	Leptospira_phage	50.7	6.7e-33
VEC46578.1|307040_307307_+|transposase	transposase	transposase	NA	NA	NA	NA
VEC46579.1|307662_307929_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46580.1|308749_309694_-	ectoine utilization protein EutC	NA	A0A1V0SL93	Klosneuvirus	23.0	7.8e-13
VEC46581.1|309690_310710_-	pyridoxal-5'-phosphate-dependent protein subunit beta	NA	NA	NA	NA	NA
VEC46582.1|310804_311563_-	Glutamate transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.6	1.2e-32
VEC46583.1|311686_312418_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	1.6e-29
VEC46584.1|312432_313089_-	cysteine ABC transporter permease	NA	NA	NA	NA	NA
VEC46585.1|313085_313775_-	polar amino acid ABC transporter inner membrane subunit	NA	NA	NA	NA	NA
VEC46586.1|313869_314478_-	ABC transporter arginine-binding protein 1	NA	NA	NA	NA	NA
VEC46587.1|314425_314725_-	ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB	NA	NA	NA	NA	NA
VEC46588.1|314916_316326_+	protein YjiR	NA	A0A1X9I5H2	Streptococcus_phage	24.5	7.6e-12
VEC46589.1|316819_318010_+	peptidase M24	NA	NA	NA	NA	NA
VEC46590.1|318133_318433_+	ectoine utilization protein EutE	NA	NA	NA	NA	NA
VEC46591.1|318423_319020_+	ectoine utilization protein EutE	NA	NA	NA	NA	NA
VEC46592.1|319066_320245_+	Cystathionine gamma-lyase	NA	A0A1V0SL56	Klosneuvirus	23.5	1.5e-16
VEC46593.1|320381_320528_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46594.1|320755_321013_+|transposase	transposase mutator type	transposase	A0A218MNI5	uncultured_virus	40.3	1.6e-08
321293:321352	attL	CGGTGGTGATGGCGAGATCAGAATAGCGCTGAGGTCTTCCCCGTGATGAAGGCGTTGCCG	NA	NA	NA	NA
VEC46595.1|322225_322405_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46596.1|322430_322874_+	TIGR02293 family toxin-antitoxin system antitoxin component	NA	NA	NA	NA	NA
VEC46597.1|322870_323341_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEC46598.1|323450_323711_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46599.1|324522_325176_-|integrase	integrase catalytic subunit	integrase	Q716C2	Shigella_phage	96.3	7.3e-127
VEC46600.1|325388_325691_-|transposase	transposase IS3/IS911 family protein	transposase	Q716C1	Shigella_phage	98.0	1.2e-44
VEC46601.1|325659_325914_-	gene expression modulator	NA	NA	NA	NA	NA
VEC46602.1|325965_326229_+	EAL domain-containing protein	NA	NA	NA	NA	NA
VEC46603.1|326193_326499_-|transposase	transposase Tn3 family protein	transposase	A0A1B0V7H9	Salmonella_phage	61.8	2.9e-25
VEC46604.1|326845_327349_+|transposase	putative transposase	transposase	Q71TF0	Escherichia_phage	96.4	1.1e-90
VEC46605.1|327569_327929_-	galactoside permease	NA	NA	NA	NA	NA
VEC46606.1|327972_328758_-	galactoside permease	NA	NA	NA	NA	NA
VEC46607.1|328876_331951_-	beta-D-galactosidase	NA	L0N6M2	Herpes_simplex_virus	96.4	0.0e+00
VEC46608.1|332072_333221_-	lac repressor	NA	C6ZCU4	Enterobacteria_phage	96.9	3.2e-186
VEC46609.1|333993_334518_+	NADPH:quinone reductase and related Zn-dependent oxidoreductases	NA	NA	NA	NA	NA
VEC46610.1|334792_336604_-|transposase	transposase Tn3 family protein	transposase	A0A1B0V7H9	Salmonella_phage	45.1	1.1e-140
VEC46611.1|336762_337341_+	resolvase domain-containing protein	NA	A0A0F7LA37	Escherichia_phage	37.7	3.9e-23
VEC46612.1|337516_338722_+	chromate ion transporter family chromate transporter	NA	NA	NA	NA	NA
VEC46613.1|338732_339038_+	transcriptional regulator, Acidobacterial, PadR-family	NA	NA	NA	NA	NA
VEC46614.1|339166_339865_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.9	5.0e-89
VEC46615.1|339949_340270_+	DNA-binding transcriptional repressor ArsR	NA	A0A2H4J145	uncultured_Caudovirales_phage	44.8	2.9e-20
VEC46616.1|340236_341604_+	arsenical pump membrane protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	71.4	2.1e-168
VEC46617.1|341616_342042_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	72.1	1.9e-51
VEC46618.1|342776_343058_-	Transposase and inactivated derivatives	NA	A0A0P0ZDM8	Stx2-converting_phage	94.5	1.8e-45
VEC46619.1|343156_343924_-	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	NA	G3M9Y6	Bacillus_virus	25.2	9.8e-14
351660:351908	attR	CGGCAACGCCTTCATCACGGGGAAGACCTCAGCGCTATTCTGATCTCGCCATCACCACCGTTCTGGTCATTAAACGCGTGTTCAGGTTGACCCTGCGCGCTGCACAGGGTTTTATTGATTCCATTTTTACACTGATGAATGTTCCGTTGCGCTGCCCGGATTACACCAGTGTCAGCAAGCGCGCAAAGTCGGTTAATGTCAGTTTCAAAACGTTCACCCGGGGTGAAATCGCGCATCTGGTGATTGATT	NA	NA	NA	NA
>prophage 6
LR134223	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 1	403436	351180	394413	403436	integrase,protease,transposase	Escherichia_phage(26.09%)	49	351471:351530	393484:393686
VEC46627.1|351180_351285_-	Transposase and inactivated derivatives	NA	U5N3F9	Enterobacteria_phage	93.5	1.5e-10
351471:351530	attL	TTTGTTGAATAAATCGAACTTTTGCTGAGTTGAAGGATCAGATCACGCATCTTCCCGACA	NA	NA	NA	NA
VEC46628.1|351499_352468_+|transposase	transposase	transposase	A0A1B0VFY5	Salmonella_phage	96.6	2.5e-179
VEC46629.1|352605_353037_+	Transposase and inactivated derivatives	NA	A0A0P0ZEB3	Stx2-converting_phage	91.6	6.4e-71
VEC46630.1|353183_353561_+|transposase	IS1 transposase orfB	transposase	Q71TF0	Escherichia_phage	99.2	8.4e-67
VEC46631.1|353777_354497_-|integrase	putative integrase	integrase	A0A1B1P773	Bacillus_phage	42.2	6.3e-47
VEC46632.1|354499_354805_-	Transposase and inactivated derivatives	NA	NA	NA	NA	NA
VEC46633.1|355119_356082_-|protease	Zn-dependent protease with chaperone function	protease	NA	NA	NA	NA
VEC46634.1|356068_356818_-	diguanylate cyclase	NA	NA	NA	NA	NA
VEC46635.1|357055_357253_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46636.1|357252_357675_-	ATPase	NA	A0A1S6UBG5	Serratia_phage	32.2	2.5e-11
VEC46637.1|357725_359894_-	ATPase	NA	K4FB40	Cronobacter_phage	41.0	3.9e-76
VEC46638.1|360154_360724_-	heat shock protein Hsp20	NA	NA	NA	NA	NA
VEC46639.1|361286_361805_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46640.1|363101_363392_+|integrase	integrase catalytic subunit	integrase	Q716C2	Shigella_phage	95.3	1.3e-43
VEC46641.1|363399_363606_+|transposase	IS911 transposase orfB	transposase	Q716C2	Shigella_phage	92.6	1.3e-32
VEC46642.1|363602_363986_+|transposase	putative IS903 transposase	transposase	Q9MCT5	Escherichia_phage	93.7	7.0e-37
VEC46643.1|363982_364192_+|transposase	putative transposase	transposase	Q9MCT5	Escherichia_phage	100.0	6.3e-32
VEC46644.1|364217_364511_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46645.1|364524_365313_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46646.1|365508_365775_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46647.1|366867_367224_+|transposase	putative transposase	transposase	Q9MCT5	Escherichia_phage	85.5	1.4e-47
VEC46648.1|367220_367478_+|transposase	putative IS903 transposase	transposase	Q9MCT5	Escherichia_phage	91.2	5.0e-31
VEC46649.1|368282_369197_+	HNH endonuclease	NA	NA	NA	NA	NA
VEC46650.1|369197_369323_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC46651.1|369382_369733_-	Uncharacterized protein conserved in bacteria	NA	A0A218MND9	uncultured_virus	51.4	6.0e-19
VEC46652.1|369880_370312_-	silver binding protein SilE	NA	NA	NA	NA	NA
VEC46653.1|370549_372028_-	sensor kinase CusS	NA	W8CYF6	Bacillus_phage	28.6	6.7e-27
VEC46654.1|372020_372701_-	transcriptional regulatory protein CusR	NA	W8CYM9	Bacillus_phage	35.6	2.1e-31
VEC46655.1|372890_374276_+	Copper/silver efflux system outer membrane protein CusC	NA	NA	NA	NA	NA
VEC46656.1|374304_374658_+	copper/silver efflux system protein CusF	NA	NA	NA	NA	NA
VEC46657.1|374771_376064_+	copper/silver efflux system membrane fusion protein CusB	NA	NA	NA	NA	NA
VEC46658.1|376074_379221_+	cation efflux system protein SilA	NA	S5VTK5	Leptospira_phage	22.6	8.0e-62
VEC46659.1|379307_379748_+	Predicted metal-binding protein	NA	NA	NA	NA	NA
VEC46660.1|379874_382322_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.4	3.8e-83
VEC46661.1|382362_382560_+	Protein of uncharacterised function (DUF2933).	NA	NA	NA	NA	NA
VEC46662.1|382593_383331_-	putative peptidase	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	31.9	1.3e-10
VEC46663.1|383619_384069_-	copper-binding protein PcoE	NA	NA	NA	NA	NA
VEC46664.1|384303_385395_+	copper-resistance protein, CopA family	NA	NA	NA	NA	NA
VEC46665.1|385412_386120_+	copper-resistance protein, CopA family	NA	NA	NA	NA	NA
VEC46666.1|386119_387016_+	Uncharacterized protein involved in copper resistance	NA	NA	NA	NA	NA
VEC46667.1|387055_387436_+	copper resistance protein C	NA	NA	NA	NA	NA
VEC46668.1|387440_388370_+	copper resistance protein D	NA	NA	NA	NA	NA
VEC46669.1|388424_389105_+	two component heavy metal response transcriptional regulator	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
VEC46670.1|389101_390502_+	two-component system, OmpR family, heavy metal sensor histidine kinase CusS	NA	W8CYF6	Bacillus_phage	26.6	2.4e-18
VEC46671.1|390717_391152_+	copper-binding protein pcoE	NA	NA	NA	NA	NA
VEC46672.1|391448_392429_-|transposase	putative transposase	transposase	A0A077SK28	Escherichia_phage	98.8	8.9e-185
VEC46673.1|392425_392722_-	YagP	NA	NA	NA	NA	NA
VEC46674.1|392841_393231_+	Tautomerase enzyme	NA	NA	NA	NA	NA
VEC46675.1|393666_394413_+|transposase	transposase	transposase	Q1MVF0	Enterobacteria_phage	94.7	1.2e-130
393484:393686	attR	TTTGTTGAATAAATCGAACTTTTGCTGAGTTGAAGGATCAGATCACGCATCTTCCCGACAACGCAGACCGTTCCGTGGCAAAGCAAAAGTTCAAAATCACCAACTGGCCCACCTACAATAAAGCCCTCATCAACCGTGGCTCCATAACTTTCTGGCTGGATGATGAAGCTATTCAGGCCTGGTATGAGTCGGCAACGCCTTCA	NA	NA	NA	NA
>prophage 1
LR134224	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 2	5172599	1766135	1808497	5172599	tail,terminase,protease,portal,head,integrase,capsid	Klebsiella_phage(39.22%)	59	1765962:1766021	1803971:1804034
1765962:1766021	attL	CGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGC	NA	NA	NA	NA
VEC52634.1|1766135_1767128_-|integrase	Putative integrase	integrase	A0A192Y7M7	Salmonella_phage	87.2	4.9e-175
VEC52637.1|1767129_1767357_-	Uncharacterised protein	NA	Q8HAA9	Salmonella_phage	78.4	1.1e-29
VEC52639.1|1767664_1768093_-	Uncharacterised protein	NA	A0A077K9V6	Edwardsiella_phage	37.3	1.2e-08
VEC52642.1|1768089_1768383_-	Uncharacterised protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
VEC52645.1|1768382_1768910_-	Phage EaD protein	NA	A0A2H4A316	Salmonella_phage	46.1	9.1e-19
VEC52648.1|1768906_1769308_-	Uncharacterised protein	NA	S4TTI6	Salmonella_phage	78.9	1.6e-55
VEC52651.1|1769279_1769543_-	Uncharacterised protein	NA	S5MQM0	Escherichia_phage	97.0	2.8e-29
VEC52654.1|1769535_1769739_-	Uncharacterised protein	NA	A0A2R2Z313	Escherichia_phage	92.5	2.6e-30
VEC52657.1|1769735_1770521_-	PRTRC system ParB family protein	NA	C7BGF1	Burkholderia_phage	53.3	8.1e-64
VEC52659.1|1770520_1770820_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52662.1|1770907_1771831_-	DNA recombinase	NA	S4TWL4	Salmonella_phage	63.2	3.8e-105
VEC52665.1|1772112_1772757_-	SOS-response transcriptional repressors (RecA-mediated autopeptidases)	NA	A0A1I9KG86	Aeromonas_phage	40.2	5.3e-37
VEC52668.1|1773086_1773548_+	Uncharacterised protein	NA	K7PJS5	Enterobacterial_phage	88.2	1.7e-69
VEC52671.1|1773954_1774800_+	PaaX family transcriptional regulator	NA	H2DE83	Erwinia_phage	57.3	2.2e-30
VEC52676.1|1774866_1775676_+	DMT family permease	NA	A0A1C9II58	Salmonella_phage	69.3	1.2e-110
VEC52679.1|1775685_1776063_+	crossover junction endodeoxyribonuclease	NA	A0A1C9IIA0	Salmonella_phage	73.6	5.1e-48
VEC52681.1|1776075_1777056_+	Putative cytoplasmic protein	NA	A0A291AWV9	Escherichia_phage	67.8	1.5e-136
VEC52684.1|1777069_1777648_+	Protein of uncharacterised function (DUF1133)	NA	A0A0U2S606	Escherichia_phage	57.8	2.0e-51
VEC52687.1|1777799_1778039_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52690.1|1778196_1778508_+	Uncharacterised protein	NA	A0A286N2Q5	Klebsiella_phage	83.5	1.1e-40
VEC52693.1|1778504_1779044_+	Predicted lysozyme (DUF847)	NA	A0A286N2Q6	Klebsiella_phage	99.4	1.1e-101
VEC52696.1|1779040_1779388_+	Uncharacterised protein	NA	A0A286N2Q7	Klebsiella_phage	81.7	1.8e-39
VEC52699.1|1779384_1779660_+	Uncharacterised protein	NA	A0A286N2Q8	Klebsiella_phage	84.6	7.8e-06
VEC52702.1|1779604_1779808_+	Uncharacterised protein	NA	A0A286SGR9	Klebsiella_phage	90.2	7.2e-25
VEC52705.1|1779906_1780215_+	Uncharacterised protein	NA	Q5QF73	Pseudomonas_virus	55.1	4.2e-16
VEC52708.1|1780211_1780478_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52711.1|1780648_1780882_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52714.1|1781377_1781875_+|terminase	Phage terminase small subunit	terminase	K7PHI2	Enterobacteria_phage	71.3	9.7e-63
VEC52717.1|1781878_1783630_+|terminase	terminase	terminase	A0A1P8DTK0	Proteus_phage	72.2	6.7e-252
VEC52720.1|1783626_1783788_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52723.1|1783777_1785004_+|portal	HK97 family phage portal protein	portal	Q8SBI0	Shigella_phage	85.3	1.9e-208
VEC52726.1|1784996_1785596_+|head,protease	HK97 family phage prohead protease	head,protease	Q8SBH9	Shigella_phage	82.0	5.0e-90
VEC52729.1|1785605_1786844_+|capsid	HK97 family phage major capsid protein	capsid	Q8SBH8	Shigella_phage	69.2	6.8e-158
VEC52733.1|1786921_1787239_+	phage protein DNA packaging protein	NA	A0A1W6JNZ5	Morganella_phage	52.0	1.5e-21
VEC52737.1|1787308_1787506_+	Uncharacterised protein	NA	A0A286S2A5	Klebsiella_phage	96.9	2.4e-25
VEC52740.1|1787507_1787840_+|head,tail	phage head-tail adaptor	head,tail	A0A286S2A2	Klebsiella_phage	98.2	7.6e-56
VEC52743.1|1787832_1788372_+	phage protein, HK97 gp10 family	NA	A0A286S249	Klebsiella_phage	98.9	1.1e-93
VEC52746.1|1788368_1788734_+	Protein of uncharacterised function (DUF3168)	NA	A0A286S1R1	Klebsiella_phage	94.2	7.1e-63
VEC52749.1|1788790_1789282_+	Uncharacterised protein	NA	A0A286S1Q8	Klebsiella_phage	98.8	9.5e-87
VEC52753.1|1789325_1789679_+	Uncharacterised protein	NA	A0A286S1N4	Klebsiella_phage	98.3	1.4e-60
VEC52756.1|1789711_1789975_+	Uncharacterised protein	NA	A0A286S1P2	Klebsiella_phage	98.9	6.9e-44
VEC52759.1|1790500_1792936_+|tail	prophage tail length tape measure	tail	A0A286S1S3	Klebsiella_phage	89.0	0.0e+00
VEC52762.1|1793402_1793879_+	Domain of uncharacterised function (DUF1833)	NA	A0A286S2B1	Klebsiella_phage	98.7	1.9e-84
VEC52765.1|1793896_1794130_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52768.1|1794109_1794988_-	Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain	NA	S6BFN8	Thermus_phage	42.3	7.5e-26
VEC52771.1|1795102_1795483_+	COG2116: Formate/nitrite family of transporters	NA	A0A286S2A6	Klebsiella_phage	92.1	1.1e-66
VEC52774.1|1795479_1796730_+	Uncharacterised protein	NA	A0A286S259	Klebsiella_phage	96.7	2.1e-207
VEC52777.1|1796753_1798040_+	putative kinase	NA	A0A286S259	Klebsiella_phage	96.5	2.2e-239
VEC52780.1|1798039_1798546_+	putative kinase	NA	A0A286S259	Klebsiella_phage	97.6	2.5e-90
VEC52783.1|1798624_1800487_+	Uncharacterised protein	NA	A0A286S1P0	Klebsiella_phage	77.4	9.6e-47
VEC52786.1|1800486_1801254_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC52789.1|1801391_1801682_+	Uncharacterised protein	NA	K7PGV5	Enterobacterial_phage	41.2	3.2e-10
VEC52792.1|1801681_1802407_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	75.1	1.5e-83
VEC52795.1|1802458_1802947_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	84.4	6.8e-69
VEC52798.1|1802939_1803611_-	Gifsy-2 prophage protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.9	6.9e-80
VEC52801.1|1804304_1805450_-	Outer membrane protein N precursor	NA	Q1MVN1	Enterobacteria_phage	58.7	1.1e-117
1803971:1804034	attR	CGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGCCACT	NA	NA	NA	NA
VEC52804.1|1805988_1806270_+	putative outer membrane protein N	NA	NA	NA	NA	NA
VEC52807.1|1806312_1807020_+	metal-dependent phosphohydrolase	NA	S4W232	Pandoravirus	27.7	2.8e-07
VEC52810.1|1807096_1808497_+	DNA-cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	53.0	3.9e-101
>prophage 2
LR134224	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 2	5172599	1852485	1861712	5172599	tRNA	Tupanvirus(16.67%)	11	NA	NA
VEC52972.1|1852485_1854273_+|tRNA	aspartyl-tRNA synthetase	tRNA	A0A2K9L3L6	Tupanvirus	27.2	1.3e-11
VEC52975.1|1854274_1854718_+	Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB)	NA	NA	NA	NA	NA
VEC52978.1|1854745_1855486_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA	NA
VEC52981.1|1855520_1856042_+	Crossover junction endodeoxyribonuclease ruvC	NA	G3MA90	Bacillus_virus	35.1	3.4e-10
VEC52984.1|1856121_1856733_+	Holliday junction DNA helicase subunit RuvA	NA	NA	NA	NA	NA
VEC52987.1|1856741_1857752_+	Holliday junction DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	24.3	1.8e-07
VEC52990.1|1857815_1858601_-	high-affinity zinc transporter membrane protein	NA	NA	NA	NA	NA
VEC52993.1|1858600_1859080_-	Zinc ABC transporter, ATP-binding protein ZnuC	NA	R4TX06	Phaeocystis_globosa_virus	36.8	7.3e-07
VEC52996.1|1859060_1859354_-	high-affinity zinc transporter ATPase	NA	M1HS04	Acanthocystis_turfacea_Chlorella_virus	29.9	4.9e-06
VEC52999.1|1859432_1860377_+	Zinc ABC transporter, periplasmic-binding protein ZnuA	NA	NA	NA	NA	NA
VEC53002.1|1860392_1861712_+	Cell wall endopeptidase, family M23/M37	NA	A8ATH6	Listeria_phage	38.2	5.3e-15
>prophage 3
LR134224	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 2	5172599	2670148	2681033	5172599		Escherichia_phage(87.5%)	9	NA	NA
VEC55773.1|2670148_2673256_+	Beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
VEC55776.1|2673310_2674576_+	Lactose permease	NA	NA	NA	NA	NA
VEC55779.1|2674606_2675695_-	putative RecF protein	NA	A0A077SLJ9	Escherichia_phage	99.7	3.0e-210
VEC55782.1|2675780_2676041_-	Uncharacterised protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
VEC55786.1|2676337_2677198_+	Beta-lactamase	NA	A0A077SL40	Escherichia_phage	99.7	4.4e-156
VEC55789.1|2677218_2677980_-	DeoR-family trancriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
VEC55792.1|2678240_2679143_+	2-hydroxy-3-oxopropionate reductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
VEC55795.1|2679154_2680420_+	Predicted pyridoxine biosynthesis protein (probably from glycolaldehide)	NA	A0A077SLJ7	Escherichia_phage	99.5	3.9e-233
VEC55798.1|2680412_2681033_+	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 4
LR134224	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 2	5172599	3821308	3834628	5172599	tRNA,integrase	Morganella_phage(22.22%)	17	3809388:3809407	3831568:3831587
3809388:3809407	attL	TACCCCCAAATGTACCCCCA	NA	NA	NA	NA
VEC59129.1|3821308_3822010_+	putative antirepressor protein	NA	A0A0P0IDX3	Acinetobacter_phage	34.6	1.2e-29
VEC59131.1|3822071_3823049_-	Uncharacterised protein	NA	F1C596	Cronobacter_phage	56.3	2.4e-81
VEC59133.1|3823069_3823513_-	Helix-destabilizing protein	NA	NA	NA	NA	NA
VEC59135.1|3823694_3825809_-	zinc-binding domain of primase-helicase family protein	NA	A0A1W6JPG0	Morganella_phage	61.6	9.1e-211
VEC59137.1|3825805_3826021_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59139.1|3826017_3826281_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59141.1|3826277_3826595_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59143.1|3826591_3826771_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59145.1|3827491_3827671_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59147.1|3827663_3828143_-	COG3617: Prophage antirepressor	NA	Q5G8R0	Enterobacteria_phage	32.5	1.7e-08
VEC59149.1|3828219_3828474_-	COG3617: Prophage antirepressor	NA	A0A0R6PJV6	Moraxella_phage	54.5	2.2e-07
VEC59151.1|3828487_3828919_-	Uncharacterised protein	NA	A0A1W6JPH9	Morganella_phage	49.6	8.2e-26
VEC59153.1|3829243_3830176_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC59155.1|3830320_3831550_-|integrase	prophage CPS-53 integrase	integrase	Q7M297	Enterobacteria_phage	53.6	6.2e-127
VEC59157.1|3832116_3832983_+	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	34.8	1.3e-30
3831568:3831587	attR	TACCCCCAAATGTACCCCCA	NA	NA	NA	NA
VEC59159.1|3832984_3833197_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
VEC59161.1|3833242_3834628_-|tRNA	cysteinyl-tRNA synthetase	tRNA	M1PG92	Moumouvirus	35.4	3.5e-46
>prophage 5
LR134224	Klebsiella aerogenes strain NCTC9652 genome assembly, chromosome: 2	5172599	4981282	4986830	5172599		Enterobacteria_phage(50.0%)	6	NA	NA
VEC61744.1|4981282_4981861_-	4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase	NA	A0A0F7LAY0	uncultured_marine_virus	48.2	2.8e-13
VEC61745.1|4982154_4982865_-	Glucose-1-phosphate thymidylyltransferase	NA	A0A291LA53	Escherichia_phage	59.8	2.2e-23
VEC61746.1|4982861_4982990_-	Glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	71.8	4.1e-10
VEC61747.1|4982989_4983226_-	Glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	60.0	2.3e-14
VEC61748.1|4983576_4985748_-	UDP-glucose dehydrogenase	NA	I7HTA3	Enterobacteria_phage	56.4	2.4e-81
VEC61749.1|4985744_4986830_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A1V0SAG5	Catovirus	33.2	9.3e-26
