The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	421952	434354	4778444	integrase	Enterobacteria_phage(62.5%)	12	415774:415788	439272:439286
415774:415788	attL	TTGCCGGATAGCCGA	NA	NA	NA	NA
VEB95321.1|421952_422531_-	Tellurite resistance protein TehB	NA	A0A2H4J5G6	uncultured_Caudovirales_phage	50.6	1.2e-16
VEB95322.1|422530_423538_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEB95323.1|424049_425312_+|integrase	Prophage CP4-57 integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.0	2.4e-73
VEB95324.1|425359_428113_-	cobalt transporter ATP-binding subunit	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	24.1	7.6e-24
VEB95325.1|428479_428992_-	Phage polarity suppression protein (Psu)	NA	Q7M2A1	Enterobacteria_phage	51.2	7.4e-34
VEB95326.1|429007_429253_-	DNA-binding transcriptional regulator	NA	Q7M294	Enterobacteria_phage	58.0	7.2e-19
VEB95327.1|429249_430092_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB95328.1|430692_430911_+	Predicted transcriptional regulator	NA	Q7M299	Enterobacteria_phage	75.0	1.1e-26
VEB95329.1|431270_431465_+	Uncharacterised protein	NA	Q7M2A7	Enterobacteria_phage	83.9	2.7e-21
VEB95330.1|431461_431689_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB95331.1|431685_432006_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB95332.1|432020_434354_+	DNA primase TraC	NA	Q7M2A8	Enterobacteria_phage	79.9	0.0e+00
439272:439286	attR	TTGCCGGATAGCCGA	NA	NA	NA	NA
>prophage 2
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	744172	751964	4778444	integrase	uncultured_Mediterranean_phage(33.33%)	6	748294:748306	754177:754189
VEB95632.1|744172_744934_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	45.5	3.7e-53
VEB95633.1|744927_745554_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	47.9	1.4e-34
VEB95634.1|745684_746827_+	Murein hydrolase activator NlpD precursor	NA	D7RWE0	Brochothrix_phage	35.6	6.6e-06
VEB95635.1|746883_747876_+	RNA polymerase sigma factor rpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
VEB95636.1|747945_750507_-	DNA mismatch repair protein mutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	21.0	1.6e-28
748294:748306	attL	TTTCTCCGGCAGC	NA	NA	NA	NA
VEB95637.1|750650_751964_+|integrase	Prophage CP4-57 integrase	integrase	I6R9B6	Salmonella_phage	26.5	1.5e-17
VEB95637.1|750650_751964_+|integrase	Prophage CP4-57 integrase	integrase	I6R9B6	Salmonella_phage	26.5	1.5e-17
754177:754189	attR	TTTCTCCGGCAGC	NA	NA	NA	NA
>prophage 3
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	916264	931787	4778444	lysis,tail	uncultured_Caudovirales_phage(33.33%)	24	NA	NA
VEB95777.1|916264_916525_-	Uncharacterized ferredoxin-like protein yfhL	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	51.2	5.5e-17
VEB95778.1|916786_917533_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	A0A2I6PIE7	Escherichia_phage	45.1	1.1e-46
VEB95779.1|917820_918156_+	36-mer N-terminal peptide of the N protein (N36)	NA	Q716D8	Shigella_phage	50.0	1.2e-16
VEB95780.1|918213_918513_+	Uncharacterised protein	NA	O64361	Escherichia_phage	48.0	8.8e-19
VEB95781.1|918512_919004_+	Phage-related lysozyme (muraminidase)	NA	A0A1R3Y5W5	Salmonella_virus	51.2	2.1e-41
VEB95782.1|919000_919459_+|lysis	Bacteriophage lysis protein	lysis	Q2A0C4	Sodalis_phage	44.9	1.2e-22
VEB95783.1|919508_920390_+	Lactonizing lipase precursor	NA	NA	NA	NA	NA
VEB95784.1|920435_920975_+	Uncharacterised protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	41.3	3.2e-35
VEB95785.1|920978_922118_+	Protein of uncharacterised function (DUF3383)	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	62.3	1.2e-129
VEB95786.1|922128_922569_+	Protein of uncharacterised function (DUF3277)	NA	A0A0M5M1K6	Salmonella_phage	63.0	1.4e-44
VEB95787.1|922572_922986_+	Uncharacterised protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	58.9	1.4e-38
VEB95788.1|922985_923174_+	Uncharacterised protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	46.0	1.4e-06
VEB95789.1|923163_924915_+	Uncharacterised protein	NA	A0A0M4REK7	Salmonella_phage	34.4	3.8e-61
VEB95790.1|924914_925493_+	Uncharacterised protein	NA	A0A0M3ULD5	Salmonella_phage	46.1	8.4e-34
VEB95791.1|925502_925811_+	Uncharacterised protein	NA	A0A0M4R5B7	Salmonella_phage	55.0	5.5e-24
VEB95792.1|925820_926744_+	Uncharacterised protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	41.0	8.3e-68
VEB95793.1|926867_927551_+	Mu-like prophage protein gp45	NA	A0A0M5M1K7	Salmonella_phage	54.6	4.3e-61
VEB95794.1|927547_927898_+	Uncharacterised protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	55.6	3.8e-29
VEB95795.1|927898_929098_+	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0M4RD32	Salmonella_phage	71.4	3.3e-157
VEB95796.1|929094_929724_+	Protein of uncharacterised function (DUF2612)	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	66.2	7.2e-79
VEB95797.1|929723_930590_+	Uncharacterised protein	NA	A0A0M3ULD8	Salmonella_phage	52.7	1.1e-21
VEB95798.1|930853_931075_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB95799.1|931128_931230_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB95800.1|931247_931787_+|tail	Caudovirales tail fibre assembly protein	tail	F1BUK2	Cronobacter_phage	33.3	6.4e-20
>prophage 4
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	1540423	1551068	4778444		Enterobacteria_phage(25.0%)	12	NA	NA
VEB96352.1|1540423_1541848_+	putative colanic acid biosynthesis protein	NA	A0A291LBB9	Klebsiella_phage	29.9	8.5e-19
VEB96353.1|1542012_1542912_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.1	9.0e-51
VEB96354.1|1543320_1544406_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.5	2.2e-99
VEB96355.1|1544402_1545302_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.4	8.8e-30
VEB96356.1|1545349_1546225_+	Glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	64.5	6.0e-108
VEB96357.1|1546242_1546653_+	WxcM-like, C-terminal	NA	NA	NA	NA	NA
VEB96358.1|1546639_1547113_+	Putative acetyltransferase SA2342	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	43.9	1.9e-07
VEB96359.1|1547099_1548206_+	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	30.7	2.7e-41
VEB96360.1|1548205_1548835_+	O-antigen translocase	NA	NA	NA	NA	NA
VEB96361.1|1549186_1549477_+	O-antigen translocase	NA	NA	NA	NA	NA
VEB96362.1|1549487_1550393_+	Glycosyl transferases group 1	NA	NA	NA	NA	NA
VEB96363.1|1550534_1551068_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	56.2	5.3e-51
>prophage 5
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	1986757	1998210	4778444		uncultured_Caudovirales_phage(55.56%)	13	NA	NA
VEB97062.1|1986757_1987666_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	46.6	7.7e-58
VEB97064.1|1987868_1988882_-	response regulator of RpoS	NA	Q6XM27	Feldmannia_irregularis_virus	30.5	4.0e-07
VEB97066.1|1988963_1989872_-	NTE family protein rssA	NA	NA	NA	NA	NA
VEB97068.1|1989986_1990442_+	Predicted metal-binding protein related to the C-terminal domain of SecA	NA	NA	NA	NA	NA
VEB97070.1|1990505_1991348_+	Formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	46.3	2.4e-13
VEB97072.1|1992421_1992799_-	chromosome condensation membrane protein	NA	A0A2H4J148	uncultured_Caudovirales_phage	54.0	1.8e-24
VEB97074.1|1993029_1993458_-	Arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	66.4	4.4e-48
VEB97076.1|1993468_1994059_-	Arsenic efflux pump protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	70.6	2.5e-73
VEB97078.1|1994033_1994759_-	Arsenic efflux pump protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	72.4	3.5e-85
VEB97080.1|1994813_1995155_-	HTH-type transcriptional repressor AseR	NA	A0A2H4J145	uncultured_Caudovirales_phage	56.0	9.7e-22
VEB97082.1|1995293_1995971_-	Respiratory nitrate reductase 1 gamma chain	NA	NA	NA	NA	NA
VEB97084.1|1995970_1996675_-	Redox enzyme maturation protein NarJ	NA	NA	NA	NA	NA
VEB97086.1|1996671_1998210_-	Respiratory nitrate reductase 1 beta chain	NA	A0A077SL61	Escherichia_phage	40.3	6.3e-20
>prophage 6
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	2087920	2137787	4778444	lysis,head,terminase,tail	Salmonella_phage(33.33%)	83	NA	NA
VEB97250.1|2087920_2089111_-	Uncharacterised protein	NA	A0A220NRP2	Escherichia_phage	41.8	6.4e-44
VEB97252.1|2089554_2090229_-	Uncharacterised protein	NA	K7PGV3	Enterobacterial_phage	40.4	1.1e-37
VEB97254.1|2090530_2094283_-	Domain of uncharacterised function (DUF1983)	NA	I6R9B3	Salmonella_phage	75.3	0.0e+00
VEB97256.1|2094324_2094849_-|tail	Phage-related protein, tail component	tail	H6WRW3	Salmonella_phage	58.0	2.5e-45
VEB97258.1|2094791_2095511_-	NlpC/P60 family	NA	A0A1V0E5M9	Salmonella_phage	69.5	1.8e-102
VEB97260.1|2095661_2096216_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	87.7	4.6e-90
VEB97262.1|2096250_2096601_-	Phage-related protein	NA	Q5G8W6	Enterobacteria_phage	79.3	7.3e-49
VEB97263.1|2096600_2099990_-|tail	Phage-related minor tail protein	tail	Q5G8W8	Enterobacteria_phage	40.0	5.7e-122
VEB97265.1|2100049_2100433_-	Uncharacterised protein	NA	A0A0M4QWT0	Salmonella_phage	60.3	3.5e-36
VEB97267.1|2100504_2101179_-	Uncharacterised protein	NA	G0ZNE7	Cronobacter_phage	53.6	1.2e-63
VEB97269.1|2101228_2101969_-	Bacterial Ig-like domain (group 2)	NA	G0ZNE6	Cronobacter_phage	66.3	3.1e-81
VEB97271.1|2102034_2102427_-	Uncharacterised protein	NA	G0ZNE4	Cronobacter_phage	52.3	1.4e-32
VEB97273.1|2102423_2102822_-	Uncharacterised protein	NA	A0A291AXD9	Shigella_phage	53.8	2.0e-34
VEB97275.1|2102823_2103171_-	Uncharacterised protein	NA	G0ZNE2	Cronobacter_phage	60.0	1.7e-34
VEB97277.1|2103357_2103525_-	Uncharacterised protein	NA	Q5G8X7	Enterobacteria_phage	55.6	2.1e-14
VEB97279.1|2103524_2103926_-	Uncharacterised protein	NA	G0ZNE1	Cronobacter_phage	82.7	4.7e-60
VEB97281.1|2103985_2104276_-	Uncharacterised protein	NA	A0A1V0E5P8	Salmonella_phage	77.3	1.9e-34
VEB97283.1|2104285_2105362_-	Uncharacterised protein	NA	A0A1V0E5P6	Salmonella_phage	77.9	4.0e-162
VEB97285.1|2105381_2105834_-	Uncharacterised protein	NA	A0A1V0E5Q8	Salmonella_phage	83.1	1.1e-62
VEB97287.1|2105833_2107108_-	Uncharacterised protein	NA	G0ZND7	Cronobacter_phage	78.0	3.1e-190
VEB97289.1|2107110_2108046_-|head	phage head morphogenesis protein, SPP1 gp7 family	head	H6WRT1	Salmonella_phage	60.8	3.8e-100
VEB97291.1|2108020_2109349_-	Protein of uncharacterised function (DUF1073)	NA	H6WRT0	Salmonella_phage	72.5	3.2e-185
VEB97293.1|2109370_2110624_-|terminase	phage terminase, large subunit, PBSX family	terminase	I6RSK1	Salmonella_phage	90.9	3.2e-203
VEB97295.1|2110620_2111040_-	Terminase small subunit	NA	A0A1V0E5Q4	Salmonella_phage	91.2	2.0e-61
VEB97297.1|2111043_2111352_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97299.1|2111932_2112424_-	Uncharacterized phage-encoded protein	NA	A0A0P0ZFJ1	Escherichia_phage	77.6	2.4e-66
VEB97301.1|2112603_2113041_-|lysis	Bacteriophage lysis protein	lysis	M9NYX9	Enterobacteria_phage	59.9	2.8e-42
VEB97303.1|2113037_2113526_-	Phage-related lysozyme (muraminidase)	NA	A0A2H4FND7	Salmonella_phage	79.6	3.0e-69
VEB97305.1|2113528_2113744_-	Lysis protein S	NA	Q9ZWW2	Enterobacteria_phage	64.8	6.7e-21
VEB97307.1|2113945_2114428_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97309.1|2114797_2115457_-	Antitermination protein	NA	K7PKS8	Enterobacteria_phage	58.9	5.9e-76
VEB97311.1|2115558_2115735_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97313.1|2115731_2115911_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97315.1|2115907_2116087_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97317.1|2116083_2116482_-	Crossover junction endodeoxyribonuclease rusA	NA	A0A1V0E5J0	Salmonella_phage	82.4	6.8e-59
VEB97319.1|2116478_2116769_-	82 prophage-derived uncharacterized protein ybcO	NA	A0A220NQY2	Salmonella_phage	70.8	1.2e-33
VEB97321.1|2116761_2117061_-	Uncharacterised protein	NA	A0A220NQY7	Salmonella_phage	37.1	5.0e-06
VEB97323.1|2117053_2117224_-	NinF protein	NA	NA	NA	NA	NA
VEB97325.1|2117217_2117997_-	Modification methylase HhaI	NA	W0LM09	Edwardsiella_phage	67.0	1.7e-69
VEB97327.1|2117993_2118194_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97329.1|2118201_2118651_-	Protein of uncharacterised function (DUF1367)	NA	A0A2R2Z328	Escherichia_phage	61.1	3.6e-48
VEB97331.1|2118659_2118857_-	Uncharacterised protein	NA	A0A2H4FUS3	Salmonella_phage	80.6	8.9e-20
VEB97333.1|2118849_2119155_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97335.1|2119165_2119390_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97337.1|2119416_2119590_-	Uncharacterised protein	NA	A0A076G6T8	Escherichia_phage	45.6	3.9e-11
VEB97339.1|2119586_2119676_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97341.1|2119672_2120170_-	GTP pyrophosphokinase rsh	NA	A0A218M393	Acidovorax_phage	45.5	3.3e-26
VEB97348.1|2120166_2120553_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97354.1|2120549_2121245_-	Replication protein P	NA	A0A077KCC8	Edwardsiella_phage	53.1	8.2e-60
VEB97359.1|2121241_2122189_-	Uncharacterised protein	NA	F1C5C3	Cronobacter_phage	66.7	4.3e-51
VEB97360.1|2122185_2122983_-	ParB/RepB/Spo0J family partition protein	NA	A0A2H4J902	uncultured_Caudovirales_phage	67.6	5.0e-93
VEB97361.1|2123021_2123360_-	Uncharacterised protein	NA	A0A1W6JNY4	Morganella_phage	52.6	5.8e-19
VEB97362.1|2123486_2123672_-	DNA-binding transcriptional regulator DicC	NA	A5VW97	Enterobacteria_phage	91.8	7.3e-24
VEB97363.1|2123753_2124449_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	Q76H56	Enterobacteria_phage	41.8	1.0e-33
VEB97364.1|2124533_2124965_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97365.1|2124961_2125573_+	Baculovirus polyhedron envelope protein, PEP, C terminus	NA	NA	NA	NA	NA
VEB97366.1|2125629_2125863_+	Uncharacterised protein	NA	A0A192Y6D5	Salmonella_phage	57.9	2.2e-17
VEB97367.1|2125971_2126145_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97368.1|2126723_2127053_+	36-mer N-terminal peptide of the N protein (N36)	NA	Q716D8	Shigella_phage	54.5	5.5e-22
VEB97369.1|2127538_2128168_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97370.1|2128254_2128485_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97371.1|2128594_2128876_+	Uncharacterised protein	NA	A0A0A0P241	Enterobacteria_phage	36.6	4.2e-07
VEB97372.1|2128925_2129132_+	Uncharacterised protein	NA	A0A2D1GLS1	Escherichia_phage	86.4	1.6e-27
VEB97373.1|2129144_2129372_+	Uncharacterised protein	NA	B5WZV1	Pseudomonas_phage	40.3	1.4e-05
VEB97374.1|2129387_2129501_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97375.1|2129599_2130574_+	Uncharacterised protein	NA	A0A1P8CWZ3	Bacillus_phage	32.9	1.0e-39
VEB97376.1|2130657_2130795_+	Lambda Phage CIII	NA	NA	NA	NA	NA
VEB97377.1|2130797_2130986_+	Uncharacterised protein	NA	A0A075B8F9	Enterobacteria_phage	69.4	1.1e-19
VEB97378.1|2130975_2131119_+	Uncharacterised protein	NA	A0A1R3Y5R4	Salmonella_virus	59.6	1.3e-07
VEB97379.1|2131118_2131787_+	Exodeoxyribonuclease 10	NA	A0A218M4G8	Erwinia_phage	29.8	3.7e-09
VEB97380.1|2131792_2132659_+	phage nucleotide-binding protein	NA	A0A1B1P9H8	Acinetobacter_phage	48.8	1.4e-56
VEB97381.1|2132658_2132847_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97382.1|2132860_2133160_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97383.1|2133170_2133455_+	Uncharacterised protein	NA	K7P7M4	Enterobacteria_phage	61.1	6.6e-24
VEB97384.1|2133447_2133633_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97385.1|2133629_2134226_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97386.1|2134222_2134708_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB97387.1|2134704_2135277_+	Uncharacterised protein	NA	Q5G8U8	Enterobacteria_phage	39.6	6.4e-10
VEB97388.1|2135273_2135501_+	Uncharacterised protein	NA	K7P6F8	Enterobacteria_phage	68.9	2.1e-17
VEB97389.1|2135501_2135921_+	Uncharacterised protein	NA	C6ZR29	Salmonella_phage	68.8	4.2e-51
VEB97390.1|2135917_2136379_+	Uncharacterised protein	NA	H6WRY2	Salmonella_phage	64.3	1.2e-19
VEB97391.1|2136452_2136692_+	Uncharacterised protein	NA	I6PD82	Cronobacter_phage	62.0	3.6e-23
VEB97392.1|2137547_2137787_-	Uncharacterized HTH-type transcriptional regulator YddM	NA	A0A2L1IV52	Escherichia_phage	42.5	1.3e-09
>prophage 7
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	2965187	2973332	4778444	lysis	Shigella_phage(38.46%)	14	NA	NA
VEB98954.1|2965187_2965670_-|lysis	Bacteriophage lysis protein	lysis	Q8HA85	Salmonella_phage	53.9	1.0e-32
VEB98956.1|2965648_2966134_-	Phage-related lysozyme (muraminidase)	NA	A0A1R3Y5W5	Salmonella_virus	57.2	4.3e-47
VEB98958.1|2966105_2966375_-	Uncharacterised protein	NA	K7P6H9	Enterobacteria_phage	75.0	6.2e-32
VEB98960.1|2966767_2966971_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB98962.1|2967402_2968446_-	Modification methylase RsrI	NA	Q8SBE2	Shigella_phage	75.9	2.3e-159
VEB98964.1|2968595_2968787_-	Uncharacterised protein	NA	Q8SBE3	Shigella_phage	79.4	7.8e-21
VEB98966.1|2969016_2970039_+	Uncharacterised protein	NA	S5FNT5	Shigella_phage	67.9	2.4e-132
VEB98968.1|2970046_2970625_+	Uncharacterised protein	NA	S5FXQ0	Shigella_phage	66.1	4.4e-67
VEB98970.1|2970629_2970980_-	Phage antitermination protein Q	NA	A0A0P0ZCW0	Stx2-converting_phage	77.9	3.9e-50
VEB98972.1|2971238_2972027_-	Protein of uncharacterised function (DUF968)	NA	S5FV02	Shigella_phage	48.0	2.7e-59
VEB98974.1|2972011_2972383_-	Holliday junction resolvase	NA	K7P6W0	Enterobacteria_phage	68.6	5.7e-44
VEB98975.1|2972382_2972586_-	Uncharacterised protein	NA	K7PJT9	Enterobacteria_phage	52.3	4.1e-12
VEB98977.1|2972582_2972990_-	LexA repressor	NA	K7PHB4	Enterobacterial_phage	42.7	1.5e-16
VEB98979.1|2973029_2973332_-	Uncharacterised protein	NA	H6WRY6	Salmonella_phage	74.7	1.9e-29
>prophage 8
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	3095432	3104833	4778444	protease,tRNA	Organic_Lake_phycodnavirus(16.67%)	8	NA	NA
VEB99191.1|3095432_3097163_+	Lipid A export ATP-binding/permease protein MsbA	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.5	5.1e-18
VEB99193.1|3097215_3097911_+|tRNA	Leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
VEB99195.1|3098196_3098415_+	Translation initiation factor IF-1	NA	NA	NA	NA	NA
VEB99197.1|3098513_3100787_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	5.6e-166
VEB99199.1|3100814_3101099_-|protease	ATP-dependent Clp protease adapter protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	46.7	1.2e-14
VEB99201.1|3101459_3101681_+	Cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
VEB99203.1|3101774_3103721_-	Macrolide export ATP-binding/permease protein MacB	NA	G9BWD6	Planktothrix_phage	41.4	1.7e-38
VEB99205.1|3103717_3104833_-	Macrolide-specific efflux protein macA precursor	NA	A0A140XAI1	Dickeya_phage	39.8	2.8e-09
>prophage 9
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	3484307	3531838	4778444	tRNA,terminase	Edwardsiella_phage(22.41%)	87	NA	NA
VEB99908.1|3484307_3484640_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	1.7e-10
VEB99910.1|3484661_3485789_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.8	8.0e-89
VEB99912.1|3486039_3486204_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99914.1|3486907_3487420_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99916.1|3487429_3488404_-	Uncharacterised protein	NA	A0A077KC23	Edwardsiella_phage	65.4	2.9e-42
VEB99918.1|3488403_3489051_-	Protein of uncharacterised function (DUF2612)	NA	A0A077K9U8	Edwardsiella_phage	66.4	3.3e-79
VEB99920.1|3489047_3490283_-	Uncharacterized homolog of phage Mu protein gp47	NA	A0A077KGW9	Edwardsiella_phage	58.9	1.8e-134
VEB99922.1|3490291_3490651_-	Uncharacterised protein	NA	A0A077KCA1	Edwardsiella_phage	43.6	5.6e-20
VEB99924.1|3490922_3491639_-	Mu-like prophage protein gp45	NA	A0A077KAY0	Edwardsiella_phage	41.0	1.5e-32
VEB99926.1|3491613_3492492_-	Uncharacterised protein	NA	A0A077KC17	Edwardsiella_phage	32.2	2.5e-37
VEB99928.1|3492488_3492794_-	Uncharacterised protein	NA	A0A077K9U4	Edwardsiella_phage	42.4	2.1e-20
VEB99930.1|3492793_3493600_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99932.1|3493603_3495550_-	Membrane-bound lytic murein transglycosylase D precursor	NA	A0A0M4REK7	Salmonella_phage	75.6	6.1e-52
VEB99934.1|3495594_3496041_-	Uncharacterised protein	NA	H9C0W9	Aeromonas_phage	32.0	1.9e-09
VEB99936.1|3496040_3496238_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99938.1|3496252_3496657_-	Uncharacterised protein	NA	H9C0W7	Aeromonas_phage	42.4	2.1e-15
VEB99940.1|3496666_3497110_-	Uncharacterised protein	NA	A0A077K9T0	Edwardsiella_phage	37.4	9.3e-17
VEB99942.1|3497110_3498589_-	Protein of uncharacterised function (DUF3383)	NA	H9C0W5	Aeromonas_phage	36.9	1.2e-76
VEB99944.1|3498589_3499141_-	Uncharacterised protein	NA	A0A077KC88	Edwardsiella_phage	28.1	6.6e-12
VEB99946.1|3499137_3499506_-	Uncharacterised protein	NA	A6N3B2	Burkholderia_virus	40.0	1.0e-16
VEB99948.1|3499505_3499949_-	Uncharacterised protein	NA	A0A077KC03	Edwardsiella_phage	61.4	1.0e-39
VEB99950.1|3499941_3500346_-	Uncharacterised protein	NA	Q2NPC6	Xanthomonas_phage	37.6	4.4e-13
VEB99952.1|3500349_3500676_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99954.1|3500675_3501695_-	Uncharacterised protein	NA	A0A219YBB0	Aeromonas_phage	38.9	1.1e-57
VEB99956.1|3501694_3502192_-	Uncharacterised protein	NA	A0A077KAW3	Edwardsiella_phage	42.6	1.9e-26
VEB99958.1|3502193_3503375_-	Uncharacterized protein conserved in bacteria	NA	A0A219YBB9	Aeromonas_phage	37.0	6.9e-59
VEB99960.1|3503436_3504246_-	Phage Mu protein F like protein	NA	A0A2R3UAK2	Myoviridae_environmental_samples	39.9	1.0e-45
VEB99962.1|3504202_3505633_-	phage-associated protein, HI1409 family	NA	A0A077KC81	Edwardsiella_phage	36.1	1.4e-77
VEB99964.1|3505629_3506820_-|terminase	phage terminase, large subunit, PBSX family	terminase	A0A220NQL3	Acinetobacter_phage	56.7	1.1e-120
VEB99966.1|3506985_3507567_-	Terminase small subunit	NA	I3PUX8	Vibrio_phage	50.3	4.6e-40
VEB99968.1|3507619_3507817_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99970.1|3507817_3507985_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99972.1|3507987_3508206_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99974.1|3508207_3508693_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99976.1|3508831_3509245_-	Uncharacterised protein	NA	F1C5D3	Cronobacter_phage	53.7	9.9e-29
VEB99978.1|3509241_3509868_-	Predicted chitinase	NA	F1C5D2	Cronobacter_phage	74.9	9.9e-89
VEB99980.1|3509860_3510175_-	Uncharacterised protein	NA	F1C5D1	Cronobacter_phage	76.0	5.6e-40
VEB99982.1|3510478_3510697_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99984.1|3511489_3512251_-	Antitermination protein	NA	K7PKS8	Enterobacteria_phage	61.6	2.6e-91
VEB99986.1|3512247_3512454_-	Phage NinH protein	NA	Q5G8R8	Enterobacteria_phage	56.7	2.7e-11
VEB99988.1|3512450_3512630_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB99990.1|3512802_3513201_-	Crossover junction endodeoxyribonuclease rusA	NA	A0A1V0E5J0	Salmonella_phage	81.7	2.0e-58
VEB99992.1|3513197_3513488_-	82 prophage-derived uncharacterized protein ybcO	NA	A0A220NQY2	Salmonella_phage	71.9	9.4e-34
VEB99994.1|3513480_3513780_-	Uncharacterised protein	NA	A0A220NQY7	Salmonella_phage	37.1	5.0e-06
VEB99996.1|3513772_3513943_-	NinF protein	NA	NA	NA	NA	NA
VEB99998.1|3513936_3514716_-	Modification methylase HhaI	NA	W0LM09	Edwardsiella_phage	67.0	1.7e-69
VEC00001.1|3514712_3514913_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00003.1|3514920_3515370_-	Protein of uncharacterised function (DUF1367)	NA	A0A2R2Z328	Escherichia_phage	61.1	1.2e-48
VEC00005.1|3515373_3515562_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00006.1|3515554_3515863_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00008.1|3515892_3516114_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00010.1|3516103_3516271_-	Uncharacterised protein	NA	A0A193GYX5	Enterobacter_phage	84.8	1.9e-18
VEC00012.1|3516297_3516471_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00014.1|3516556_3516775_-	Uncharacterised protein	NA	A0A192Y6R5	Salmonella_phage	61.4	6.4e-19
VEC00016.1|3516771_3516993_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00018.1|3516989_3517265_-	Uncharacterised protein	NA	Q5G8S7	Enterobacteria_phage	63.2	5.6e-28
VEC00020.1|3517245_3517617_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00022.1|3517629_3518394_-	Replication protein P	NA	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	62.7	4.6e-88
VEC00024.1|3518390_3519146_-	Uncharacterised protein	NA	G8C7U5	Escherichia_phage	39.9	1.4e-49
VEC00026.1|3519145_3519817_-	Uncharacterized phage-encoded protein	NA	G0ZND1	Cronobacter_phage	56.8	3.0e-59
VEC00028.1|3519828_3520125_-	Bacteriophage CII protein	NA	A2SY75	Escherichia_phage	69.4	4.6e-28
VEC00030.1|3520241_3520457_-	transcriptional repressor DicA	NA	Q716D6	Shigella_phage	71.8	2.3e-21
VEC00032.1|3520558_3521191_+	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	A0A1I9KG86	Aeromonas_phage	36.9	6.6e-32
VEC00034.1|3521602_3521872_+	Uncharacterised protein	NA	K7PKE4	Enterobacteria_phage	44.4	1.8e-07
VEC00036.1|3521890_3522118_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00038.1|3522222_3522504_+	Uncharacterised protein	NA	A0A0A0P241	Enterobacteria_phage	35.6	2.1e-06
VEC00240.1|3522553_3522748_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00242.1|3522782_3523040_+	Protein of uncharacterised function (DUF551)	NA	A0A2I7S3U0	Vibrio_phage	56.2	1.2e-21
VEC00244.1|3523137_3524112_+	Uncharacterised protein	NA	A0A1P8CWZ3	Bacillus_phage	32.9	1.0e-39
VEC00245.1|3524195_3524333_+	Lambda Phage CIII	NA	NA	NA	NA	NA
VEC00247.1|3524335_3524524_+	Uncharacterised protein	NA	A0A075B8F9	Enterobacteria_phage	69.4	1.1e-19
VEC00249.1|3524513_3524657_+	Uncharacterised protein	NA	A0A1R3Y5R4	Salmonella_virus	63.6	1.6e-07
VEC00251.1|3524653_3525259_+	ERF superfamily	NA	A0A088CQ15	Enterobacteria_phage	76.1	7.6e-78
VEC00253.1|3525258_3525711_+	Helix-destabilizing protein	NA	A0A0A0P1Q9	Enterobacteria_phage	87.3	5.2e-55
VEC00255.1|3525719_3526268_+	Uncharacterised protein	NA	C6ZR35	Salmonella_phage	81.3	4.5e-85
VEC00257.1|3526287_3526593_+	Protein of uncharacterised function (DUF2856)	NA	NA	NA	NA	NA
VEC00259.1|3526603_3526864_+	Uncharacterised protein	NA	K7P7M4	Enterobacteria_phage	64.6	1.5e-22
VEC00261.1|3527038_3527260_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00263.1|3527259_3527361_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00265.1|3527375_3528050_+	Uncharacterised protein	NA	Q5G8U6	Enterobacteria_phage	72.6	2.6e-26
VEC00267.1|3528046_3528532_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00269.1|3528528_3529149_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00271.1|3529148_3529406_+	Uncharacterised protein	NA	A0A1B1W289	Salmonella_phage	58.8	6.8e-20
VEC00273.1|3529398_3529830_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00275.1|3529899_3530445_+	Uncharacterised protein	NA	E5AGD3	Erwinia_phage	34.3	1.9e-27
VEC00277.1|3530588_3530915_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC00279.1|3530974_3531838_+	site-specific tyrosine recombinase XerC	NA	G8C7S0	Escherichia_phage	33.2	3.9e-43
>prophage 10
LR134201	Cedecea lapagei strain NCTC11466 genome assembly, chromosome: 1	4778444	4566613	4576181	4778444	integrase	Morganella_phage(50.0%)	15	4561617:4561630	4577694:4577707
4561617:4561630	attL	ACTTTCCGGCAAGA	NA	NA	NA	NA
VEC01994.1|4566613_4567873_+|integrase	Prophage CP4-57 integrase	integrase	A0A1W6JPG6	Morganella_phage	76.0	1.3e-188
VEC01995.1|4567960_4568914_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC01996.1|4569029_4569233_+	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEC01997.1|4569232_4569664_+	Uncharacterised protein	NA	A0A1W6JPH9	Morganella_phage	51.1	2.0e-27
VEC01998.1|4569677_4570481_+	Phage anti-repressor protein	NA	A0A0R6PJV6	Moraxella_phage	44.9	3.9e-29
VEC02000.1|4570480_4570660_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02001.1|4570656_4571373_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02002.1|4571365_4571545_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02004.1|4571541_4571730_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02006.1|4571726_4571972_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02008.1|4571968_4572148_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02010.1|4572144_4572432_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEC02012.1|4572428_4573070_+	Uncharacterised protein	NA	A0A286S1S7	Klebsiella_phage	48.0	1.7e-43
VEC02014.1|4573078_4573429_+	Uncharacterised protein	NA	A0A1B5FPL8	Escherichia_phage	52.3	1.1e-25
VEC02016.1|4573421_4576181_+	DNA primase TraC	NA	A0A1W6JPG0	Morganella_phage	56.8	2.5e-301
4577694:4577707	attR	ACTTTCCGGCAAGA	NA	NA	NA	NA
