assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635855.1_35605_D01	LR134187	Salmonella enterica subsp. enterica serovar Havana strain NCTC6086 genome assembly, chromosome: 1	2	3900298-3901060	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,csa3,DinG,cas3,RT,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	11,12,12	12	TypeI-E	DEDDh,csa3,DinG,cas3,RT,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|49aa|up_0|LR134187.1_3900031_3900178_+,NA	NA|162aa|up_9|LR134187.1_3889379_3889865_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|167aa|up_8|LR134187.1_3889864_3890365_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_7|LR134187.1_3890390_3891164_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|882aa|up_6|LR134187.1_3891176_3893822_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_5|LR134187.1_3893955_3894543_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_4|LR134187.1_3895147_3895948_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|LR134187.1_3896175_3897813_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|LR134187.1_3897895_3899194_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_1|LR134187.1_3899329_3900001_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|49aa|up_0|LR134187.1_3900031_3900178_+	NA	NA|266aa|down_0|LR134187.1_3901157_3901955_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|LR134187.1_3902042_3902405_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|LR134187.1_3902830_3904630_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|LR134187.1_3904629_3906342_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|LR134187.1_3906417_3907152_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|140aa|down_5|LR134187.1_3907364_3907784_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|188aa|down_6|LR134187.1_3907755_3908319_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|751aa|down_7|LR134187.1_3909175_3911428_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|down_8|LR134187.1_3911439_3912996_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|down_9|LR134187.1_3912992_3913553_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2
GCA_900635855.1_35605_D01	LR134187	Salmonella enterica subsp. enterica serovar Havana strain NCTC6086 genome assembly, chromosome: 1	3	3917322-3919061	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,csa3,DinG,cas3,RT,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	28,28,28	28	TypeI-E	DEDDh,csa3,DinG,cas3,RT,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|188aa|up_9|LR134187.1_3907755_3908319_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|751aa|up_8|LR134187.1_3909175_3911428_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_7|LR134187.1_3911439_3912996_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|up_6|LR134187.1_3912992_3913553_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|128aa|up_5|LR134187.1_3913566_3913950_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas7|241aa|up_4|LR134187.1_3913903_3914626_+	cd09646, Cas7_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|249aa|up_3|LR134187.1_3914636_3915383_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|LR134187.1_3915364_3916015_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|LR134187.1_3916011_3916932_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LR134187.1_3916931_3917225_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|LR134187.1_3919075_3920122_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134187.1_3920372_3921281_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|LR134187.1_3921290_3922730_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|158aa|down_3|LR134187.1_3922716_3923190_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134187.1_3923373_3923697_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134187.1_3923887_3924199_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134187.1_3924217_3924928_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134187.1_3924927_3925407_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134187.1_3925403_3926453_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|416aa|down_9|LR134187.1_3926433_3927681_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
