The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	454871	510453	2377048	tRNA,transposase,head,tail	Mannheimia_phage(64.29%)	69	NA	NA
VEB25716.1|454871_456176_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.5	6.6e-95
VEB25717.1|456293_456773_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	44.8	2.0e-25
VEB25718.1|456906_458316_-	Predicted ATPase	NA	NA	NA	NA	NA
VEB25719.1|458382_459222_+	adenylate cyclase	NA	NA	NA	NA	NA
VEB25720.1|459264_459714_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25721.1|459710_459875_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEB25722.1|459876_460620_-|tRNA	tRNA pseudouridine synthase C	tRNA	NA	NA	NA	NA
VEB25723.1|460620_460932_-	Domain of uncharacterised function, DUF446	NA	NA	NA	NA	NA
VEB25724.1|460934_461693_-	filamentation induced by cAMP protein Fic-like protein	NA	D7RWK9	Brochothrix_phage	25.2	7.5e-06
VEB25725.1|461777_463187_+	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	NA	A0A0P0IR83	Acinetobacter_phage	36.8	1.2e-30
VEB25726.1|463402_465406_+|tRNA	bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase	tRNA	NA	NA	NA	NA
VEB25727.1|465701_467081_-	L-serine dehydratase	NA	NA	NA	NA	NA
VEB25728.1|467176_468406_-	serine transporter	NA	NA	NA	NA	NA
VEB25729.1|468762_470358_+	heme-binding protein A	NA	NA	NA	NA	NA
VEB25730.1|470452_471334_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
VEB25731.1|471561_472710_+	methionine synthase II (cobalamin-independent)	NA	A0A218MNE0	uncultured_virus	64.3	3.1e-144
VEB25732.1|472938_473658_-	putative phage repressor	NA	F6MII3	Haemophilus_phage	60.7	9.4e-67
VEB25733.1|473834_474113_+	putative transcriptional regulator, Nlp	NA	F6MII4	Haemophilus_phage	61.2	2.0e-17
VEB25734.1|474157_476128_+|transposase	phage transposase	transposase	A0A0M3LPN5	Mannheimia_phage	58.0	3.8e-211
VEB25735.1|476140_477022_+	Helix-turn-helix	NA	A0A0M3LP72	Mannheimia_phage	67.9	3.9e-107
VEB25736.1|477033_477231_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25737.1|477227_477539_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25738.1|477559_477847_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25739.1|477818_478037_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25740.1|478046_478664_+	Protein of uncharacterised function (DUF3164)	NA	A0A0M3LQ92	Mannheimia_phage	82.3	5.0e-93
VEB25741.1|478734_478935_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25742.1|478955_479192_+	Protein of uncharacterised function (DUF2786)	NA	NA	NA	NA	NA
VEB25743.1|479430_479649_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25744.1|479638_480190_+	Uncharacterised protein	NA	A0A0M3LP85	Mannheimia_phage	38.1	2.9e-28
VEB25745.1|480191_480431_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25746.1|480503_481070_+	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	72.9	1.2e-72
VEB25747.1|481053_481482_+	Mu-like prophage protein gp16	NA	F6MIJ6	Haemophilus_phage	66.7	4.2e-46
VEB25748.1|481690_481873_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25749.1|481957_482335_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25750.1|482453_482879_+	Uncharacterized conserved protein	NA	A0A0M3LRS6	Mannheimia_phage	48.2	2.3e-33
VEB25751.1|482964_483510_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.3	9.9e-69
VEB25752.1|483512_483734_+	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	88.6	4.9e-27
VEB25753.1|483733_484123_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
VEB25754.1|484198_484477_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25755.1|484473_484728_+	Uncharacterised protein	NA	A0A0M3LP87	Mannheimia_phage	57.1	3.7e-18
VEB25756.1|484740_485241_+	Protein of uncharacterised function (DUF1804)	NA	A0A0M3LQI8	Mannheimia_phage	92.2	3.1e-77
VEB25757.1|485240_485342_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25758.1|485338_486964_+	phage uncharacterized protein, C-terminal domain	NA	A0A0M3LQB7	Mannheimia_phage	92.8	1.7e-302
VEB25759.1|487007_488648_+	Mu-like prophage protein gp29	NA	A0A0M3LRU4	Mannheimia_phage	86.8	3.6e-279
VEB25760.1|488634_489924_+|head	phage head morphogenesis protein, SPP1 gp7 family	head	B7SDN5	Haemophilus_phage	83.2	3.1e-214
VEB25761.1|490071_490488_+	Mu-like prophage protein gpG	NA	A0A0M3LSP9	Mannheimia_phage	84.7	2.6e-61
VEB25762.1|490756_491821_+	Mu-like prophage I protein	NA	A0A0M3LPA7	Mannheimia_phage	88.9	3.7e-176
VEB25763.1|491820_492738_+|head	Mu-like prophage major head subunit gpT	head	B7SDP1	Haemophilus_phage	85.5	5.1e-150
VEB25764.1|492783_493158_+	Uncharacterised protein	NA	B7SDP3	Haemophilus_phage	53.5	1.9e-23
VEB25765.1|493157_493583_+	Mu-like prophage protein gp36	NA	A0A0M3LP98	Mannheimia_phage	80.9	3.6e-58
VEB25766.1|493579_494221_+	Mu-like prophage protein gp37	NA	A0A0M3LQJ7	Mannheimia_phage	87.3	6.1e-102
VEB25767.1|494221_494401_+	Uncharacterised protein	NA	A0A0M3LQM9	Mannheimia_phage	88.1	3.0e-22
VEB25768.1|494400_495813_+|tail	Mu-like prophage tail sheath protein gpL	tail	A0A0M3LQC3	Mannheimia_phage	90.6	5.1e-234
VEB25769.1|495822_496197_+	Uncharacterised protein	NA	A0A0M3LRV6	Mannheimia_phage	78.2	5.8e-52
VEB25770.1|496196_496565_+	Uncharacterised protein	NA	A0A0M3LSI2	Mannheimia_phage	76.2	3.9e-45
VEB25771.1|496642_496789_+	Uncharacterised protein	NA	A0A0M3LSQ8	Mannheimia_phage	80.4	7.8e-13
VEB25772.1|496842_499023_+|tail	Phage-related minor tail protein	tail	A0A0M3LPB6	Mannheimia_phage	41.3	4.1e-105
VEB25773.1|499022_500315_+	Mu-like prophage DNA circulation protein	NA	A0A0M3LQ21	Mannheimia_phage	87.7	5.7e-216
VEB25774.1|500318_501482_+|tail	Mu-like prophage tail protein gpP	tail	A0A0M3LPS4	Mannheimia_phage	92.5	5.7e-199
VEB25775.1|501478_502141_+	Mu-like prophage protein gp45	NA	A0A0M3LPA3	Mannheimia_phage	73.5	4.6e-84
VEB25776.1|502239_502590_+	Phage protein GP46	NA	A0A0M3LQK5	Mannheimia_phage	92.2	2.1e-56
VEB25777.1|502601_503663_+	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0M3LQN4	Mannheimia_phage	87.0	2.4e-175
VEB25778.1|503662_504229_+	Uncharacterized protein conserved in bacteria (DUF2313)	NA	A0A0M3LQE1	Mannheimia_phage	67.9	3.9e-68
VEB25779.1|504225_506685_+	Uncharacterised protein	NA	A0A0M3LRW6	Mannheimia_phage	42.7	8.3e-30
VEB25780.1|506687_507302_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25781.1|507302_507758_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	55.6	1.6e-43
VEB25782.1|507997_508867_-	FAD flavoprotein oxidase	NA	NA	NA	NA	NA
VEB25783.1|508842_509595_-	FAD flavoprotein oxidase	NA	NA	NA	NA	NA
VEB25784.1|509646_510453_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	1.6e-19
>prophage 2
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	586208	679810	2377048	head,plate,integrase,tRNA,protease,terminase,capsid,holin,portal,tail	Mannheimia_phage(49.12%)	111	665225:665244	686311:686330
VEB25848.1|586208_586301_-|holin	choline/carnitine/betaine transporter	holin	NA	NA	NA	NA
VEB25849.1|586633_587608_-	dioxygenase	NA	NA	NA	NA	NA
VEB25850.1|587713_588601_+	transcriptional regulator	NA	NA	NA	NA	NA
VEB25851.1|588901_589999_+	ATPase	NA	NA	NA	NA	NA
VEB25852.1|590263_592177_+	type I modification enzyme	NA	A0A1W6JNK1	Staphylococcus_phage	46.6	4.0e-157
VEB25853.1|592169_593300_+	Restriction enzyme BgcI subunit beta	NA	A0A1W6JNN3	Staphylococcus_phage	26.8	2.0e-31
VEB25854.1|593380_593815_+	Restriction enzyme BgcI subunit beta	NA	NA	NA	NA	NA
VEB25855.1|594108_594927_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25856.1|595096_595621_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	57.2	1.1e-43
VEB25857.1|595771_598600_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.4	0.0e+00
VEB25858.1|598736_598949_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25859.1|599069_600992_+	ATP-dependent helicase	NA	A0A127AW80	Bacillus_phage	31.3	4.1e-93
VEB25860.1|601058_601418_+	putative effector of murein hydrolase LrgA	NA	NA	NA	NA	NA
VEB25861.1|601427_602114_+	putative effector of murein hydrolase	NA	NA	NA	NA	NA
VEB25862.1|602218_603967_+	lipid transporter ATP-binding/permease	NA	W8CYL7	Bacillus_phage	29.9	1.5e-57
VEB25863.1|604095_604728_+	outer membrane lipoprotein LolB	NA	NA	NA	NA	NA
VEB25864.1|604737_605595_+	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
VEB25865.1|605606_606557_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.4	8.1e-42
VEB25866.1|606630_607638_+	dihydroorotate dehydrogenase 2	NA	NA	NA	NA	NA
VEB25867.1|607992_610647_+	pyruvate dehydrogenase subunit E1	NA	NA	NA	NA	NA
VEB25868.1|610706_612605_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
VEB25869.1|612700_614125_+	dihydrolipoamide dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.7	2.9e-43
VEB25870.1|614717_615926_+|integrase	Prophage CP4-57 integrase	integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	33.0	1.3e-47
VEB25871.1|616019_616181_-	prophage CP4-57 regulatory protein	NA	NA	NA	NA	NA
VEB25872.1|616177_616633_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25873.1|616642_617026_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25874.1|617031_617226_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25875.1|617237_617672_-	Uncharacterized protein conserved in bacteria	NA	S5M9Z4	Pseudoalteromonas_phage	56.0	6.7e-36
VEB25876.1|617765_618224_-	single-strand binding protein	NA	F8TUL2	EBPR_podovirus	49.7	5.4e-36
VEB25877.1|618240_620532_-	Bacteriophage replication gene A protein (GPA)	NA	Q1I108	Pasteurella_virus	47.7	1.6e-168
VEB25878.1|620528_620708_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25879.1|620685_620826_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25880.1|620822_621278_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25881.1|621280_621610_-	Uncharacterised protein	NA	Q19UT2	Mannheimia_phage	59.8	3.5e-21
VEB25882.1|622047_622260_-	Uncharacterized protein conserved in bacteria, prophage-related	NA	Q19UN8	Mannheimia_phage	68.9	7.6e-17
VEB25883.1|622374_623064_+	putative phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	64.6	1.1e-77
VEB25884.1|623092_623476_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25885.1|623621_623804_+	YcfA-like protein	NA	D6R431	Bacillus_phage	73.3	3.4e-18
VEB25886.1|623827_624235_+	Uncharacterised protein family (UPF0150)	NA	Q775F5	Haemophilus_virus	65.9	2.0e-45
VEB25887.1|624246_624639_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25888.1|624635_624983_-	Phage protein D	NA	Q19UP4	Mannheimia_phage	68.7	6.8e-39
VEB25889.1|625090_625861_-	Phage protein D	NA	A0A0M3LPR9	Mannheimia_phage	68.4	6.9e-92
VEB25890.1|625860_626298_-	Phage protein U	NA	A0A0M3LQ18	Mannheimia_phage	68.3	2.1e-53
VEB25891.1|626304_626472_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25892.1|626686_626983_-|tail	Phage tail protein E	tail	Q19UP7	Mannheimia_phage	60.0	1.8e-24
VEB25893.1|627039_627546_-|tail	phage major tail tube protein	tail	Q19UP8	Mannheimia_phage	69.6	1.2e-65
VEB25894.1|627551_628745_-|tail	Phage tail sheath protein	tail	A0A0M3LPE9	Mannheimia_phage	80.7	1.3e-185
VEB25895.1|628849_629104_-	Uncharacterised protein	NA	A0A0M3LNN9	Mannheimia_phage	70.0	6.3e-26
VEB25896.1|629093_629732_-	Uncharacterised protein	NA	A0A0M3LRX2	Mannheimia_phage	68.4	2.6e-60
VEB25897.1|629733_632412_-	Uncharacterised protein	NA	A0A0M3LS19	Mannheimia_phage	59.4	5.4e-83
VEB25898.1|632408_632957_-|tail	Bacteriophage P2-related tail formation protein	tail	Q19UQ4	Mannheimia_phage	60.1	2.8e-55
VEB25899.1|632943_633861_-	Uncharacterized homolog of phage Mu protein gp47	NA	Q19UQ5	Mannheimia_phage	64.6	1.0e-105
VEB25900.1|633857_634196_-	Gene 25-like lysozyme	NA	Q19UQ6	Mannheimia_phage	58.2	4.0e-28
VEB25901.1|634192_634795_-|plate	Phage P2 baseplate assembly protein gpV	plate	A0A0M3LPY9	Mannheimia_phage	52.9	3.6e-35
VEB25902.1|634924_637471_-|tail	putative tail protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	34.5	8.4e-94
VEB25903.1|637474_637933_-	Mu-like prophage protein gpG	NA	Q19UR2	Mannheimia_phage	45.2	3.0e-26
VEB25904.1|637916_638423_-|tail	P2 phage tail completion protein R (GpR)	tail	Q19UR3	Mannheimia_phage	57.6	1.9e-42
VEB25905.1|638419_638638_-	conjugal transfer protein TraR	NA	A0A0M3LS11	Mannheimia_phage	71.2	6.2e-22
VEB25906.1|638832_639219_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25907.1|639203_639722_-	endolysin	NA	A0A0M3LPQ1	Mannheimia_phage	48.3	3.3e-37
VEB25908.1|639708_639912_-	Uncharacterised protein	NA	Q19UR7	Mannheimia_phage	54.2	1.2e-06
VEB25909.1|639916_640129_-	Phage Tail Protein X	NA	A0A0M3LPY0	Mannheimia_phage	58.6	5.4e-15
VEB25910.1|640137_640650_-|head	Phage head completion protein (GPL)	head	A0A0M3LNL8	Mannheimia_phage	71.0	4.2e-61
VEB25911.1|640770_641451_-|terminase	Phage small terminase subunit	terminase	A0A0M3LP11	Mannheimia_phage	52.3	9.2e-56
VEB25912.1|641450_642491_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M3LPD2	Mannheimia_phage	64.1	7.3e-121
VEB25913.1|642535_643360_-|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	A0A0M3LSA0	Mannheimia_phage	46.6	3.5e-57
VEB25914.1|643528_645337_+	Uncharacterized conserved protein	NA	Q19UT5	Mannheimia_phage	78.8	3.2e-281
VEB25915.1|645412_646345_+|portal	phage portal protein, PBSX family	portal	Q19UT6	Mannheimia_phage	65.6	2.3e-121
VEB25916.1|647021_647327_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25917.1|647405_649049_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic	NA	NA	NA	NA	NA
VEB25918.1|649129_649492_-	diacylglycerol kinase	NA	NA	NA	NA	NA
VEB25919.1|649740_650955_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
VEB25920.1|651054_652908_+	recombination protein 2	NA	NA	NA	NA	NA
VEB25921.1|653381_654467_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
VEB25922.1|654514_655444_-	Uncharacterised protein family UPF0052	NA	A1IMD5	Streptococcus_phage	29.3	3.2e-27
VEB25923.1|655496_656558_-	putative permease	NA	NA	NA	NA	NA
VEB25924.1|656616_657372_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
VEB25925.1|657539_657782_+	Alternative ribosome-rescue factor A	NA	NA	NA	NA	NA
VEB25926.1|658259_658658_+|tail	Minor tail protein U	tail	NA	NA	NA	NA
VEB25927.1|658667_659855_+|capsid	phage major capsid protein, HK97 family	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	65.6	8.3e-137
VEB25928.1|659928_660501_+|head,protease	prohead protease (GP4)	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	55.3	2.4e-49
VEB25929.1|660502_661735_+	Portal protein (GP3)	NA	A0A2H4JFJ9	uncultured_Caudovirales_phage	58.5	2.6e-133
VEB25930.1|661718_662066_+|head,tail	phage head-tail adaptor	head,tail	NA	NA	NA	NA
VEB25931.1|662055_662364_+	bacteriophage protein	NA	A0A2D1GNK0	Pseudomonas_phage	34.0	8.5e-09
VEB25932.1|662378_662729_+	phage associated protein	NA	NA	NA	NA	NA
VEB25933.1|662898_663258_+	bacteriophage protein	NA	A0A2H4JHS3	uncultured_Caudovirales_phage	68.7	1.3e-40
VEB25934.1|663254_664925_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	70.4	1.4e-243
VEB25935.1|664924_665176_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25936.1|665172_665640_+	HK97 family phage protein	NA	NA	NA	NA	NA
665225:665244	attL	TAGAAAAACAGTTGCAAAAA	NA	NA	NA	NA
VEB25937.1|665704_665905_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25938.1|666000_666969_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25939.1|667103_667301_+	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEB25940.1|667312_667675_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25941.1|667820_667985_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25942.1|668460_668625_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25943.1|668617_668842_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25944.1|668851_669193_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25945.1|669185_669374_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25946.1|669366_669792_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB25947.1|669778_670309_+	primase	NA	NA	NA	NA	NA
VEB25948.1|670317_671580_+	primase	NA	Q7M2A8	Enterobacteria_phage	38.4	9.3e-78
VEB25949.1|671750_672410_-|integrase	Prophage CP4-57 integrase	integrase	A0A1V0E8G8	Vibrio_phage	40.0	1.2e-39
VEB25950.1|672390_672954_-|integrase	Prophage CP4-57 integrase	integrase	A0A1B5FPC6	Escherichia_phage	33.9	1.1e-25
VEB25951.1|673296_674109_-	diadenosine tetraphosphatase	NA	S4TT53	Salmonella_phage	35.6	1.2e-09
VEB25952.1|674133_674820_-	putative effector of murein hydrolase	NA	NA	NA	NA	NA
VEB25953.1|674816_675188_-	putative effector of murein hydrolase LrgA	NA	NA	NA	NA	NA
VEB25954.1|675262_677239_-	exoribonuclease II	NA	Q0GXV6	Lactococcus_phage	27.6	6.6e-30
VEB25955.1|677370_677649_-	Uncharacterized protein conserved in bacteria	NA	K4NZP3	Burkholderia_phage	40.5	2.3e-05
VEB25956.1|677623_677902_-	Protein of uncharacterised function (DUF497)	NA	NA	NA	NA	NA
VEB25957.1|678096_678885_-	enoyl-(acyl carrier protein) reductase	NA	NA	NA	NA	NA
VEB25958.1|679084_679810_-	S-adenosyl-L-methionine-dependent methyltransferase	NA	F5B419	Synechococcus_phage	29.6	2.1e-21
686311:686330	attR	TAGAAAAACAGTTGCAAAAA	NA	NA	NA	NA
>prophage 3
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	830455	912020	2377048	integrase,tRNA,protease,terminase,holin,tail	Mannheimia_phage(32.65%)	106	825107:825125	865671:865689
825107:825125	attL	TTTTAACCGCTTGTTTTTC	NA	NA	NA	NA
VEB26110.1|830455_831319_-|protease	Predicted metalloprotease	protease	A0A1I9SA48	Rhodococcus_phage	35.8	1.8e-32
VEB26111.1|831503_834374_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	41.0	3.3e-78
VEB26112.1|834385_834868_-	leucine-responsive transcriptional regulator	NA	NA	NA	NA	NA
VEB26113.1|834952_836068_-	ribonuclease D	NA	NA	NA	NA	NA
VEB26114.1|836246_837437_+	transcriptional regulator/sugar kinase	NA	NA	NA	NA	NA
VEB26115.1|837490_838210_+	dithiobiotin synthetase	NA	NA	NA	NA	NA
VEB26116.1|838638_839286_+	Transposase and inactivated derivatives	NA	NA	NA	NA	NA
VEB26117.1|839566_840091_-	lipoprotein	NA	A0A217EQL1	Bacillus_phage	38.1	1.6e-15
VEB26118.1|840150_840447_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	41.1	7.1e-13
VEB26119.1|840464_842852_-|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	25.5	1.8e-05
VEB26120.1|842949_843936_-|tRNA	phenylalanyl-tRNA synthetase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	37.1	4.6e-32
VEB26121.1|844217_844880_+	putative NAD(P)H nitroreductase	NA	NA	NA	NA	NA
VEB26122.1|844981_846307_-	proton glutamate symport protein	NA	NA	NA	NA	NA
VEB26123.1|846405_847176_-	Zn-ribbon-containing, possibly nucleic-acid-binding protein	NA	NA	NA	NA	NA
VEB26124.1|847156_848080_-	cation-efflux pump FieF	NA	NA	NA	NA	NA
VEB26125.1|848105_848651_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26126.1|848650_849433_-	Protein of uncharacterised function (DUF328)	NA	NA	NA	NA	NA
VEB26127.1|849554_849950_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
VEB26128.1|849966_850395_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
VEB26129.1|850699_851098_+	Putative cytochrome d ubiquinol oxidase subunit 3	NA	NA	NA	NA	NA
VEB26130.1|851130_853683_-	PII uridylyl-transferase	NA	NA	NA	NA	NA
VEB26131.1|853789_854599_-	tyrosine-specific transport protein 2	NA	NA	NA	NA	NA
VEB26132.1|854637_855006_-	tyrosine-specific transport protein 2	NA	NA	NA	NA	NA
VEB26133.1|855181_856315_-	tyrosine-specific transporter	NA	NA	NA	NA	NA
VEB26134.1|856552_857902_-|protease	cell division protease FtsH-like protein	protease	M4QMW8	Micromonas_pusilla_virus	49.0	1.8e-95
VEB26135.1|857901_858483_-|protease	cell division protease FtsH-like protein	protease	E4WLN5	Ostreococcus_tauri_virus	36.8	3.2e-09
VEB26136.1|858577_859204_-	23S rRNA methyltransferase J	NA	NA	NA	NA	NA
VEB26137.1|859457_860921_+	inosine 5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.2	4.8e-94
VEB26138.1|861030_861999_+	Protein of uncharacterised function (DUF2806)	NA	NA	NA	NA	NA
VEB26139.1|862010_863582_+	GMP synthase	NA	NA	NA	NA	NA
VEB26140.1|863784_864984_+|integrase	integrase	integrase	G9L697	Escherichia_phage	57.5	2.9e-129
VEB26141.1|865034_865283_-	Uncharacterised protein	NA	A0A0M3LNN9	Mannheimia_phage	64.9	2.7e-21
VEB26142.1|865272_865911_-	Uncharacterised protein	NA	A0A0M3LRX2	Mannheimia_phage	68.4	2.6e-60
865671:865689	attR	TTTTAACCGCTTGTTTTTC	NA	NA	NA	NA
VEB26143.1|865912_868420_-	Uncharacterised protein	NA	A0A0M3LS19	Mannheimia_phage	63.6	2.7e-28
VEB26144.1|868422_869031_-	Protein of uncharacterised function (DUF2612)	NA	NA	NA	NA	NA
VEB26145.1|869039_870479_-	Uncharacterized homolog of phage Mu protein gp47	NA	M4SNA9	Psychrobacter_phage	28.4	6.8e-16
VEB26146.1|870478_870841_-	Uncharacterised protein	NA	A0A0A1IWV2	Pseudomonas_phage	40.2	1.0e-13
VEB26147.1|870837_871461_-	Mu-like prophage protein gp45	NA	A0A2H4YGW5	Raoultella_phage	27.3	1.2e-06
VEB26148.1|871500_872478_-	Uncharacterised protein	NA	M1F267	Cronobacter_phage	22.9	8.7e-15
VEB26149.1|872610_872931_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26150.1|872932_873556_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26151.1|873603_874281_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26152.1|874326_876474_-|tail	putative tail protein	tail	H9EB42	Vibrio_phage	32.4	1.3e-31
VEB26153.1|876530_876674_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26154.1|876724_877171_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26155.1|877160_877295_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26156.1|877267_877594_-	Protein of uncharacterised function (DUF3277)	NA	A0A142IE16	Pseudomonas_phage	43.8	1.5e-08
VEB26157.1|877661_879002_-	Protein of uncharacterised function (DUF3383)	NA	A0A0N9SJA3	Pseudomonas_phage	39.6	2.2e-77
VEB26158.1|878994_879498_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26159.1|879481_879838_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26160.1|879837_880281_-	Uncharacterised protein	NA	A0A2K9V3I1	Faecalibacterium_phage	33.1	4.3e-14
VEB26161.1|880267_880621_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26162.1|880623_880782_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26163.1|880784_881732_-	Uncharacterized protein conserved in bacteria	NA	A0A0N9SG07	Pseudomonas_phage	38.3	4.6e-53
VEB26164.1|881811_882255_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26165.1|882265_883321_-	Uncharacterized protein conserved in bacteria	NA	E5AGA6	Erwinia_phage	36.8	4.3e-52
VEB26166.1|883622_884099_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26167.1|884073_885345_-	phage-associated protein, HI1409 family	NA	A0A291LBE2	Klebsiella_phage	26.6	5.8e-27
VEB26168.1|885346_886696_-	Uncharacterized conserved protein	NA	A0A220NQL3	Acinetobacter_phage	59.2	2.9e-146
VEB26169.1|886676_887207_-|terminase	phage small subunit terminase	terminase	A0A1X9SFE5	Acinetobacter_phage	48.6	1.5e-21
VEB26170.1|887220_887331_-	Uncharacterised protein	NA	A0A0M3LPX2	Mannheimia_phage	83.3	4.3e-08
VEB26171.1|887509_888163_-	DNA adenine methyltransferase YhdJ	NA	A0A1P8CMS8	Staphylococcus_phage	34.4	8.6e-35
VEB26172.1|888363_888726_-	Protein of uncharacterised function (DUF2570)	NA	NA	NA	NA	NA
VEB26173.1|888727_889345_-	chitinase	NA	Q7Y5V0	Haemophilus_phage	55.7	2.0e-57
VEB26174.1|889346_889517_-|holin	phage holin	holin	NA	NA	NA	NA
VEB26175.1|889500_889722_-|holin	phage holin	holin	NA	NA	NA	NA
VEB26176.1|890007_890652_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26177.1|890658_892248_+	ATP-dependent DNA helicase RecG	NA	A0A2H4JBR2	uncultured_Caudovirales_phage	28.6	4.7e-26
VEB26178.1|892244_893165_+	putative methyltransferase	NA	A0A0M3LSW2	Mannheimia_phage	51.6	8.7e-25
VEB26179.1|893296_893701_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26180.1|893748_894123_-	Phage antitermination protein Q	NA	NA	NA	NA	NA
VEB26181.1|894138_894456_-	Holliday junction resolvase	NA	K7P6W0	Enterobacteria_phage	64.7	1.3e-36
VEB26182.1|894490_894787_-	82 prophage-derived uncharacterized protein ybcO	NA	A0A0M3LQ97	Mannheimia_phage	65.3	2.7e-28
VEB26183.1|894817_894916_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26184.1|894912_895056_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26185.1|895294_895519_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26186.1|895533_895971_-	Protein of uncharacterised function (DUF1367)	NA	A0A0M3LR84	Mannheimia_phage	65.5	5.5e-54
VEB26187.1|895984_896932_-	type I restriction enzyme EcoR124II M protein	NA	A0A0M3LQ47	Mannheimia_phage	64.1	1.2e-106
VEB26188.1|897089_898499_-	replicative DNA helicase	NA	Q7Y5V9	Haemophilus_phage	56.6	2.8e-147
VEB26189.1|898495_899377_-	phage replication protein O, N-terminal domain	NA	A0A0N7KZ97	Stx2-converting_phage	33.2	6.6e-30
VEB26190.1|899345_899531_-	Uncharacterised protein	NA	A0A0M3LPV5	Mannheimia_phage	69.4	4.2e-11
VEB26191.1|899691_900063_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26192.1|900087_900333_-	Uncharacterised protein	NA	A0A0M3LTF5	Mannheimia_phage	80.6	5.3e-22
VEB26193.1|900353_900560_-	HTH-type transcriptional regulator	NA	A0A0M3LSY2	Mannheimia_phage	63.2	1.1e-17
VEB26194.1|900690_900960_+	Helix-turn-helix domain	NA	A0A0M3LSL8	Mannheimia_phage	53.4	2.5e-17
VEB26195.1|901082_901346_+	LexA repressor	NA	A0A0M3LSL8	Mannheimia_phage	92.0	1.9e-41
VEB26196.1|901443_901818_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26197.1|901970_902711_+	Abortive infection bacteriophage resistance protein	NA	NA	NA	NA	NA
VEB26198.1|902742_902892_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26199.1|903180_903408_+	Uncharacterised protein	NA	A0A0M3LQL0	Mannheimia_phage	62.7	3.2e-21
VEB26200.1|903824_904055_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26201.1|904396_904627_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26202.1|904630_905122_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26203.1|905125_906082_+	phage recombinase	NA	A0A0M3LNU3	Mannheimia_phage	78.8	8.5e-132
VEB26204.1|906065_906755_+	YqaJ-like viral recombinase domain	NA	A0A0M3LP90	Mannheimia_phage	67.9	5.2e-83
VEB26205.1|906758_906959_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26206.1|907006_907576_+	recombination associated protein	NA	S4TWL4	Salmonella_phage	44.9	5.9e-32
VEB26207.1|907712_907910_+	recombination associated protein	NA	Q71TA1	Escherichia_phage	49.1	7.1e-09
VEB26208.1|908205_908445_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26209.1|908560_908650_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26210.1|908630_909086_+	Uncharacterized protein conserved in bacteria	NA	S5M9Z4	Pseudoalteromonas_phage	51.4	1.1e-31
VEB26211.1|909078_909279_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26212.1|909600_909741_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26213.1|909876_910734_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB26214.1|910763_910925_+	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEB26215.1|911132_912020_-	phosphomannomutase	NA	A0A1X9I671	Streptococcus_phage	33.9	4.0e-43
>prophage 4
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	1109252	1115898	2377048		Staphylococcus_phage(50.0%)	7	NA	NA
VEB26400.1|1109252_1110545_+	aminopeptidase B	NA	Q6GYZ8	Mycoplasma_phage	33.2	1.8e-31
VEB26401.1|1110672_1111608_+	phosphosugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.0	7.0e-38
VEB26402.1|1111617_1112106_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
VEB26403.1|1112196_1112658_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.5	7.9e-43
VEB26404.1|1112768_1113974_-	riboflavin biosynthesis protein ribA	NA	A0A2H4PQS2	Staphylococcus_phage	46.7	5.0e-97
VEB26405.1|1114034_1114682_-	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	43.7	9.1e-45
VEB26406.1|1114803_1115898_-	riboflavin biosynthesis protein	NA	A0A1V0SE20	Indivirus	33.9	3.3e-47
>prophage 5
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	1386476	1395591	2377048		uncultured_Caudovirales_phage(16.67%)	9	NA	NA
VEB26651.1|1386476_1387109_+	LexA repressor	NA	A0A2H4JG58	uncultured_Caudovirales_phage	48.5	1.2e-09
VEB26652.1|1387168_1387849_+	DNA mismatch repair protein MutH	NA	NA	NA	NA	NA
VEB26653.1|1387934_1388666_+	integral membrane protein, YkoY family	NA	A0A0R6PEZ3	Moraxella_phage	48.0	8.1e-42
VEB26654.1|1388780_1389818_+	beta-hexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.9	6.8e-18
VEB26655.1|1389898_1391074_+	23S rRNA methyluridine methyltransferase	NA	A0A2P1ELP3	Moumouvirus	32.1	8.0e-15
VEB26656.1|1391280_1392591_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	59.4	1.2e-131
VEB26657.1|1392669_1393299_+	NUDIX hydrolase	NA	NA	NA	NA	NA
VEB26658.1|1393313_1393724_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEB26659.1|1393782_1395591_-	ATP-dependent DNA helicase	NA	A0A1V0SBK0	Catovirus	37.5	1.7e-85
>prophage 6
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	2377048	1715805	1723426	2377048		Enterobacteria_phage(50.0%)	7	NA	NA
VEB26983.1|1715805_1717665_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.1	2.2e-35
VEB26984.1|1717770_1719513_-	DNA primase	NA	A0A1B0WMR3	Flavobacterium_phage	29.2	7.4e-33
VEB26985.1|1719689_1719905_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
VEB26986.1|1720025_1720568_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	6.9e-54
VEB26987.1|1720567_1721443_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.2	2.3e-43
VEB26988.1|1721442_1722321_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	65.6	2.7e-108
VEB26989.1|1722361_1723426_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.2	3.3e-100
