The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	423986	483397	4687913	transposase,tRNA,protease,coat	Tupanvirus(16.67%)	53	NA	NA
VEB09300.1|423986_426374_-|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
VEB09301.1|426387_427371_-|tRNA	phenylalanyl-tRNA synthetase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	7.6e-35
VEB09302.1|427869_428226_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
VEB09303.1|428263_428461_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
VEB09304.1|428557_428908_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	31.0	5.0e-05
VEB09305.1|429112_431041_-|tRNA	threonyl-tRNA synthetase	tRNA	A0A2K9L297	Tupanvirus	37.1	1.1e-127
VEB09306.1|431431_431644_+	Uncharacterised protein	NA	A0A0K1LMB5	Caulobacter_phage	42.0	9.9e-09
VEB09307.1|432402_432654_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB09308.1|432972_433656_+	multiple drug resistance protein MarC	NA	NA	NA	NA	NA
VEB09309.1|433777_434440_-	putative membrane-bound lytic murein transglycosylase	NA	NA	NA	NA	NA
VEB09310.1|434651_435620_+	periplasmic-binding protein	NA	NA	NA	NA	NA
VEB09311.1|435616_436507_+	ATP-binding transport protein	NA	A0A1V0SKJ1	Klosneuvirus	27.5	2.9e-09
VEB09312.1|436506_437391_+	chelated iron transport system membrane protein	NA	NA	NA	NA	NA
VEB09313.1|437387_438281_+	chelated iron transport system membrane protein	NA	NA	NA	NA	NA
VEB09314.1|438585_439461_+	putative phosphotransferase/kinase	NA	NA	NA	NA	NA
VEB09315.1|439589_440144_-	putative yfeABCD locus regulator	NA	NA	NA	NA	NA
VEB09316.1|440554_441220_+	2-deoxyglucose-6-phosphatase	NA	NA	NA	NA	NA
VEB09317.1|441421_441754_-	pectin degradation protein	NA	NA	NA	NA	NA
VEB09318.1|442089_442926_+	5-keto-4-deoxyuronate isomerase	NA	NA	NA	NA	NA
VEB09319.1|443017_443779_+	2-deoxy-D-gluconate 3-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.9	3.1e-20
VEB09320.1|444123_445791_+	exopolygalacturonate lyase	NA	NA	NA	NA	NA
VEB09321.1|445831_446722_+	putative ABC sugar transporter (permease)	NA	NA	NA	NA	NA
VEB09322.1|446714_447635_+	inner membrane permease of oligogalacturonide ABC transporter	NA	NA	NA	NA	NA
VEB09323.1|447648_448776_+	putative sugar ABC transporter	NA	W5SAS9	Pithovirus	26.5	1.6e-12
VEB09324.1|448791_450084_+	putative sugar-binding protein	NA	NA	NA	NA	NA
VEB09325.1|450382_451093_+	oligogalacturonate-specific porin protein KdgM	NA	NA	NA	NA	NA
VEB09326.1|451572_452121_+	inner membrane protein	NA	A0A127AVX7	Bacillus_phage	32.9	4.0e-09
VEB09327.1|452324_453716_+	putative transport protein	NA	NA	NA	NA	NA
VEB09328.1|453930_454782_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	28.8	1.7e-11
VEB09329.1|455156_455948_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
VEB09330.1|456134_457301_-	oligogalacturonate lyase	NA	NA	NA	NA	NA
VEB09331.1|457747_459115_+	putative transport protein	NA	NA	NA	NA	NA
VEB09332.1|459168_459972_-	putative chaperone protein	NA	NA	NA	NA	NA
VEB09333.1|459968_461132_-	fimbrial componenet	NA	NA	NA	NA	NA
VEB09334.1|461128_463741_-	putative outer membrane usher protein	NA	NA	NA	NA	NA
VEB09335.1|463822_464602_-	putative chaperone protein	NA	NA	NA	NA	NA
VEB09336.1|464771_465314_-	fimbrial protein	NA	NA	NA	NA	NA
VEB09337.1|465847_466036_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB09338.1|465971_466853_-	heat shock protein HtpX	NA	NA	NA	NA	NA
VEB09339.1|467315_469394_-|protease	carboxy-terminal protease	protease	A0A0R6PIZ1	Moraxella_phage	34.8	4.0e-86
VEB09340.1|469413_470127_-	putative solute/DNA competence effector	NA	NA	NA	NA	NA
VEB09341.1|470222_470720_-	gaf domain-containing protein	NA	NA	NA	NA	NA
VEB09342.1|470846_472199_+	PqiA family integral membrane protein	NA	NA	NA	NA	NA
VEB09343.1|472167_474819_+	mce-like protein	NA	NA	NA	NA	NA
VEB09344.1|475300_475855_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
VEB09345.1|475860_476391_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
VEB09346.1|476411_476969_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
VEB09347.1|476999_477752_+	putative chaperone protein	NA	NA	NA	NA	NA
VEB09348.1|477837_479061_+	outer membrane usher protein	NA	NA	NA	NA	NA
VEB09349.1|479074_480097_+	IS100 ORF1	NA	A0A2L1IVA1	Escherichia_phage	99.7	7.0e-201
VEB09350.1|480096_480876_+|transposase	transposase/IS protein	transposase	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
VEB09351.1|480891_482244_+	outer membrane usher protein	NA	NA	NA	NA	NA
VEB09352.1|482407_483397_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 2
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	2359088	2425434	4687913	transposase,integrase,tRNA	Bacillus_phage(18.18%)	56	2356673:2356687	2428971:2428985
2356673:2356687	attL	TCAAAGATGATGATG	NA	NA	NA	NA
VEB10910.1|2359088_2359604_+|transposase	transposase	transposase	NA	NA	NA	NA
VEB10911.1|2359657_2360443_+|transposase	transposase for insertion sequence IS1661	transposase	A0A1B1P773	Bacillus_phage	45.3	2.4e-55
VEB10912.1|2360601_2361555_-	ornithine cyclodeaminase	NA	NA	NA	NA	NA
VEB10913.1|2361548_2362511_-	pyridoxal-phosphate dependent protein	NA	NA	NA	NA	NA
VEB10914.1|2362718_2364020_+	protein YidR	NA	NA	NA	NA	NA
VEB10915.1|2364062_2364398_-	putative lipoprotein	NA	NA	NA	NA	NA
VEB10916.1|2364765_2365179_+	heat shock protein IbpA	NA	A0A127KM93	Cyanophage	36.8	7.1e-19
VEB10917.1|2365459_2365924_+	heat shock chaperone IbpB	NA	A0A0E3FB97	Synechococcus_phage	32.2	3.3e-12
VEB10918.1|2366296_2367955_+	mediator of hyperadherence YidE	NA	NA	NA	NA	NA
VEB10919.1|2368067_2369333_-	valine--pyruvate transaminase	NA	NA	NA	NA	NA
VEB10920.1|2369788_2370232_-	membrane protein	NA	NA	NA	NA	NA
VEB10921.1|2370636_2372700_-	periplasmic alpha-amylase	NA	NA	NA	NA	NA
VEB10922.1|2372988_2373969_-	putative D-isomer specific 2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	29.3	9.3e-25
VEB10923.1|2374505_2375150_+	putative transcriptional regulator	NA	NA	NA	NA	NA
VEB10924.1|2375280_2375940_-	putative outer membrane lipoprotein	NA	NA	NA	NA	NA
VEB10925.1|2376298_2376754_-	putative acetyltransferase	NA	A0A1X9I6I8	Streptococcus_phage	32.2	8.1e-16
VEB10926.1|2376750_2377323_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
VEB10927.1|2377669_2378584_+|tRNA	glycyl-tRNA synthetase subunit alpha	tRNA	NA	NA	NA	NA
VEB10928.1|2378593_2380663_+|tRNA	glycyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
VEB10929.1|2381119_2381839_+	lipoprotein	NA	NA	NA	NA	NA
VEB10930.1|2382488_2384420_+	PTS system mannitol-specific transporter subunit IICBA	NA	NA	NA	NA	NA
VEB10931.1|2384556_2385720_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
VEB10932.1|2385926_2386481_+	mannitol repressor protein	NA	NA	NA	NA	NA
VEB10933.1|2386559_2386682_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB10934.1|2386729_2387086_+	Protein of uncharacterised function (DUF2810)	NA	NA	NA	NA	NA
VEB10935.1|2387250_2387727_-	Electron transfer DM13	NA	NA	NA	NA	NA
VEB10936.1|2388260_2388593_-	membrane protein	NA	NA	NA	NA	NA
VEB10937.1|2388782_2390732_-	methyl-accepting chemotaxis protein II	NA	NA	NA	NA	NA
VEB10938.1|2391075_2391699_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	57.4	2.4e-63
VEB10939.1|2392113_2392938_-	formate dehydrogenase accessory protein	NA	NA	NA	NA	NA
VEB10940.1|2396194_2397166_+	formate dehydrogenase-O, iron-sulfur subunit	NA	NA	NA	NA	NA
VEB10941.1|2397162_2397837_+	formate dehydrogenase-O subunit gamma	NA	NA	NA	NA	NA
VEB10942.1|2397836_2398766_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA	NA
VEB10943.1|2398961_2400350_+	selenocysteine synthase	NA	NA	NA	NA	NA
VEB10944.1|2400346_2402320_+|tRNA	selenocysteinyl-tRNA-specific translation factor	tRNA	A0A2K9KZ60	Tupanvirus	25.1	1.1e-11
VEB10945.1|2402326_2402791_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	85.0	1.0e-61
VEB10946.1|2403079_2403412_+	membrane protein	NA	NA	NA	NA	NA
VEB10947.1|2403425_2404007_-	putative inner membrane protein	NA	NA	NA	NA	NA
VEB10948.1|2404085_2404244_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB10949.1|2404364_2404568_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB10950.1|2404716_2405946_-	multidrug translocase	NA	NA	NA	NA	NA
VEB10951.1|2406344_2406566_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB10952.1|2406504_2407290_-|transposase	transposase for insertion sequence IS1661	transposase	A0A1B1P773	Bacillus_phage	45.3	2.4e-55
VEB10953.1|2407343_2407859_-|transposase	transposase	transposase	NA	NA	NA	NA
VEB10954.1|2408218_2409211_+	acyltransferase	NA	NA	NA	NA	NA
VEB10955.1|2410092_2410650_+	fimbrial protein	NA	NA	NA	NA	NA
VEB10956.1|2410764_2413218_+	outer membrane fimbrial usher porin	NA	NA	NA	NA	NA
VEB10957.1|2413310_2414078_+	fimbrial chaperone	NA	NA	NA	NA	NA
VEB10958.1|2414116_2415103_+	fimbrial protein	NA	NA	NA	NA	NA
VEB10959.1|2415201_2416656_-	xylulose kinase	NA	NA	NA	NA	NA
VEB10960.1|2416779_2418099_-	xylose isomerase	NA	NA	NA	NA	NA
VEB10961.1|2418561_2419557_+	D-xylose transporter subunit XylF	NA	NA	NA	NA	NA
VEB10962.1|2419764_2421297_+	xylose transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	8.5e-17
VEB10963.1|2421283_2422468_+	sugar transport system permease	NA	NA	NA	NA	NA
VEB10964.1|2422557_2423751_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
VEB10965.1|2424219_2425434_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	70.7	5.9e-162
2428971:2428985	attR	TCAAAGATGATGATG	NA	NA	NA	NA
>prophage 3
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	2906747	2971263	4687913	transposase,tRNA,protease	Escherichia_phage(15.38%)	59	NA	NA
VEB11377.1|2906747_2906945_+|transposase	transposase ORFA	transposase	NA	NA	NA	NA
VEB11378.1|2906954_2907734_-|transposase	transposase/IS protein	transposase	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
VEB11379.1|2907733_2908756_-	IS100 ORF1	NA	A0A2L1IVA1	Escherichia_phage	99.7	7.0e-201
VEB11380.1|2908998_2909391_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
VEB11381.1|2909721_2909949_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
VEB11382.1|2909988_2910441_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
VEB11383.1|2910506_2910962_-	Protein of uncharacterised function (DUF3757)	NA	NA	NA	NA	NA
VEB11384.1|2911101_2911842_-	opacity-associated protein A	NA	NA	NA	NA	NA
VEB11385.1|2912190_2912811_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
VEB11386.1|2912908_2913574_-	Regulator of cell morphogenesis and NO signaling	NA	NA	NA	NA	NA
VEB11387.1|2913702_2915661_-	bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein	NA	NA	NA	NA	NA
VEB11388.1|2916124_2916865_+	adenosine-3'(2'),5'-bisphosphate nucleotidase	NA	NA	NA	NA	NA
VEB11389.1|2916867_2917431_-	protein ytfJ	NA	NA	NA	NA	NA
VEB11390.1|2917766_2917979_+	Protein of uncharacterised function (DUF1107)	NA	NA	NA	NA	NA
VEB11391.1|2918086_2919418_-	CBS/transporter associated domain-containing protein	NA	NA	NA	NA	NA
VEB11392.1|2919695_2920334_-	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
VEB11393.1|2920608_2922345_+	surface antigen	NA	NA	NA	NA	NA
VEB11394.1|2922341_2926280_+	Family of uncharacterised function (DUF490)	NA	NA	NA	NA	NA
VEB11395.1|2926282_2926639_+	AIG2 family protein	NA	NA	NA	NA	NA
VEB11396.1|2926756_2927284_-	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	62.7	9.3e-56
VEB11397.1|2927483_2928602_-	fructose-1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	45.8	2.0e-71
VEB11398.1|2928667_2930053_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
VEB11399.1|2930348_2930612_-	Multiple stress resistance protein BhsA precursor	NA	NA	NA	NA	NA
VEB11400.1|2931000_2931471_-	arginine repressor	NA	NA	NA	NA	NA
VEB11401.1|2931934_2932873_+	malate dehydrogenase	NA	NA	NA	NA	NA
VEB11402.1|2933306_2933582_-	putative transcriptional regulator Nlp	NA	A0A2I7S995	Vibrio_phage	64.2	1.1e-18
VEB11403.1|2933765_2934113_+|transposase	MuA-transposase/repressor protein CI DNA-binding	transposase	A0A0M3LPN5	Mannheimia_phage	45.2	7.3e-09
VEB11404.1|2934209_2935181_-	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	27.6	7.8e-08
VEB11405.1|2935440_2935752_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
VEB11406.1|2935771_2936029_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
VEB11407.1|2936116_2937103_+	integral membrane protein	NA	NA	NA	NA	NA
VEB11408.1|2937103_2938276_+	GTPase ObgE	NA	NA	NA	NA	NA
VEB11409.1|2938370_2939438_-	sensor protein BasS/PmrB	NA	W8CYF6	Bacillus_phage	22.0	4.7e-06
VEB11410.1|2939434_2940097_-	DNA-binding transcriptional regulator BasR	NA	W8CYM9	Bacillus_phage	35.5	8.4e-30
VEB11411.1|2940102_2941551_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
VEB11412.1|2941808_2942285_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
VEB11413.1|2942412_2942706_-	RNA binding protein	NA	NA	NA	NA	NA
VEB11414.1|2942852_2943482_+	23S rRNA methyltransferase J	NA	NA	NA	NA	NA
VEB11415.1|2943529_2945473_+|protease	ATP-dependent metalloprotease	protease	G8DDJ2	Micromonas_pusilla_virus	44.5	4.4e-119
VEB11416.1|2945592_2946426_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	28.2	1.4e-18
VEB11417.1|2946435_2947776_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
VEB11418.1|2947998_2948334_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
VEB11419.1|2948859_2949318_+	clustered with transcription termination protein NusA	NA	NA	NA	NA	NA
VEB11420.1|2949339_2950827_+	transcription elongation factor NusA	NA	NA	NA	NA	NA
VEB11421.1|2950851_2953530_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.6	2.3e-25
VEB11422.1|2953595_2954006_+	ribosome-binding factor A	NA	NA	NA	NA	NA
VEB11423.1|2954005_2954980_+|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
VEB11424.1|2955634_2957749_+	polynucleotide phosphorylase	NA	NA	NA	NA	NA
VEB11425.1|2957873_2958758_+	lipoprotein NlpI	NA	NA	NA	NA	NA
VEB11426.1|2958944_2960939_+	ATP-dependent RNA helicase DeaD	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	31.3	1.6e-52
VEB11427.1|2961174_2961543_+	Phage-related protein	NA	NA	NA	NA	NA
VEB11428.1|2961596_2961908_+	transcriptional regulator	NA	NA	NA	NA	NA
VEB11429.1|2961907_2962012_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB11430.1|2961976_2963032_-	Luciferase-like monooxygenase family protein	NA	NA	NA	NA	NA
VEB11431.1|2963539_2964700_+	multidrug efflux protein	NA	NA	NA	NA	NA
VEB11432.1|2964703_2967829_+	multidrug efflux protein	NA	NA	NA	NA	NA
VEB11433.1|2967830_2969237_+	outer membrane protein, efflux pump	NA	NA	NA	NA	NA
VEB11434.1|2969377_2970256_-|protease	putative protease	protease	NA	NA	NA	NA
VEB11435.1|2970267_2971263_-|protease	putative protease	protease	NA	NA	NA	NA
>prophage 4
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	3433495	3471475	4687913	integrase,terminase,coat,tail	Salmonella_phage(27.5%)	60	3431357:3431414	3476201:3476258
3431357:3431414	attL	TCCCCTTCGTCCTTGACGCCGCAGCGGTGTTAGCGGCTCTCACTCGCCTGAATCACTG	NA	NA	NA	NA
VEB12058.1|3433495_3434764_-|integrase	putative phage integrase	integrase	Q8W658	Enterobacteria_phage	53.4	2.9e-127
VEB12060.1|3434799_3435051_-	putative phage excisionase	NA	A0A286S2A4	Klebsiella_phage	50.0	5.8e-16
VEB12062.1|3435131_3435290_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12064.1|3435380_3435923_-	phage N-6-adenine-methyltransferase	NA	G9L688	Escherichia_phage	67.1	6.4e-60
VEB12066.1|3435919_3436123_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12068.1|3436122_3436299_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12070.1|3436359_3436530_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12072.1|3436529_3436796_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12074.1|3436785_3436998_-	Uncharacterised protein	NA	A0A0U4JX53	Pseudomonas_phage	50.7	2.6e-09
VEB12075.1|3437001_3437250_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12077.1|3437249_3437951_-	Uncharacterised protein	NA	A0A077SLK5	Escherichia_phage	54.9	2.4e-11
VEB12079.1|3437950_3438187_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12081.1|3438188_3438614_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12083.1|3438628_3438925_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12085.1|3438951_3439548_-	Uncharacterised protein	NA	K7PHD7	Enterobacteria_phage	50.0	6.0e-43
VEB12087.1|3439544_3440225_-	phage ATP/GTP-binding protein	NA	A0A2D1GLT5	Escherichia_phage	68.6	2.0e-90
VEB12089.1|3440196_3440445_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12091.1|3440605_3440713_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12093.1|3440712_3440835_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12095.1|3440853_3441882_-	Uncharacterised protein	NA	K7P6J9	Enterobacteria_phage	65.3	1.4e-31
VEB12097.1|3441960_3442188_-	Uncharacterised protein	NA	A0A193GYL4	Enterobacter_phage	54.7	4.9e-14
VEB12099.1|3442191_3442425_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12101.1|3442481_3442604_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12103.1|3442627_3442888_-	Uncharacterised protein	NA	Q8LTB2	Lactobacillus_phage	49.4	1.8e-12
VEB12105.1|3442929_3443172_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12107.1|3443807_3444017_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12109.1|3444264_3445290_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12111.1|3445389_3446061_-	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	F1C5C2	Cronobacter_phage	49.6	8.2e-57
VEB12113.1|3446159_3446387_+	Helix-turn-helix	NA	A0A1C9IHV8	Salmonella_phage	54.2	1.3e-11
VEB12115.1|3446513_3446786_+	phage transcriptional regulator	NA	Q76H54	Enterobacteria_phage	61.0	6.1e-19
VEB12117.1|3447138_3447297_+	Uncharacterised protein	NA	Q76H53	Enterobacteria_phage	64.7	7.9e-11
VEB12119.1|3447283_3448342_+	phage replication protein O, N-terminal domain	NA	E5AGE9	Erwinia_phage	49.2	4.3e-44
VEB12121.1|3448338_3449727_+	replicative DNA helicase	NA	K7P852	Enterobacteria_phage	63.2	5.9e-158
VEB12123.1|3449726_3450158_+	Uncharacterised protein	NA	A0A0F7L470	uncultured_marine_virus	56.0	1.3e-18
VEB12125.1|3450154_3450727_+	Uncharacterised protein	NA	R9W0X9	Serratia_phage	47.5	2.1e-05
VEB12127.1|3450719_3451163_+	Uncharacterised protein	NA	K7P7B8	Enterobacteria_phage	61.6	3.3e-46
VEB12129.1|3451162_3451270_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12131.1|3451244_3451835_+	NinG-like phage protein	NA	A0A2R2Z332	Escherichia_phage	47.0	4.7e-40
VEB12133.1|3452022_3452829_+	antitermination protein	NA	M9NZB0	Enterobacteria_phage	53.3	1.8e-74
VEB12135.1|3452865_3453132_-	phage protein	NA	NA	NA	NA	NA
VEB12137.1|3453355_3453547_+	Uncharacterised protein	NA	B6SD15	Bacteriophage	59.3	4.4e-16
VEB12139.1|3453577_3454090_+	putative phage lysozyme	NA	I6PBN2	Cronobacter_phage	62.3	1.3e-49
VEB12141.1|3454074_3454530_+	putative prophage endopeptidase	NA	A5LH84	Enterobacteria_phage	41.5	1.1e-20
VEB12143.1|3454554_3454920_+	Uncharacterised protein	NA	E7C9U7	Salmonella_phage	36.9	8.2e-11
VEB12145.1|3454923_3455424_+	Uncharacterised protein	NA	C6ZR06	Salmonella_phage	72.3	8.5e-59
VEB12147.1|3455383_3456844_+|terminase	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	terminase	Q2A0C1	Sodalis_phage	66.5	3.8e-192
VEB12149.1|3456843_3459009_+	Uncharacterised protein	NA	A0A2D1GLJ6	Escherichia_phage	69.1	2.2e-289
VEB12151.1|3459022_3459931_+	Bacteriophage, scaffolding protein	NA	A0A0M3ULI9	Salmonella_phage	75.2	3.5e-119
VEB12153.1|3459930_3461214_+|coat	P22 coat protein - gene protein 5	coat	A0A2D1GLV2	Escherichia_phage	68.5	3.6e-170
VEB12155.1|3461254_3461545_+	Procyclic acidic repetitive protein (PARP)	NA	A0A2D1GLK1	Escherichia_phage	77.6	5.5e-18
VEB12157.1|3461528_3462026_+|tail	P22 tail accessory factor	tail	G8EYJ2	Enterobacteria_phage	57.1	2.3e-40
VEB12159.1|3461997_3463413_+	Phage stabilisation protein	NA	Q9AYZ4	Salmonella_phage	72.5	1.7e-205
VEB12161.1|3463412_3464114_+	Uncharacterised protein	NA	C6ZR14	Salmonella_phage	59.4	4.0e-38
VEB12163.1|3464129_3464591_+	Uncharacterised protein	NA	Q2A0B3	Sodalis_phage	70.5	2.7e-59
VEB12165.1|3464584_3465235_+	Uncharacterised protein	NA	A0A2H4FUQ9	Salmonella_phage	48.2	1.2e-39
VEB12167.1|3465234_3466671_+	Uncharacterised protein	NA	A0A2H4FND5	Salmonella_phage	43.8	1.8e-85
VEB12169.1|3466670_3468536_+	Uncharacterised protein	NA	E7C9U6	Salmonella_phage	62.2	1.7e-197
VEB12171.1|3468554_3469202_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB12173.1|3469218_3469470_-	transcriptional regulator	NA	E7C9U8	Salmonella_phage	64.6	2.3e-20
VEB12175.1|3469612_3471475_+	Head binding	NA	C6ZR19	Salmonella_phage	58.8	5.1e-48
3476201:3476258	attR	TCCCCTTCGTCCTTGACGCCGCAGCGGTGTTAGCGGCTCTCACTCGCCTGAATCACTG	NA	NA	NA	NA
>prophage 5
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	3939966	3960996	4687913	plate,protease,coat,tail	Escherichia_phage(20.0%)	24	NA	NA
VEB12997.1|3939966_3941754_-	methyl-accepting chemotaxis transmembrane protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
VEB12999.1|3942057_3942204_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13001.1|3942175_3943111_-|protease	outer membrane protease	protease	NA	NA	NA	NA
VEB13003.1|3943282_3943525_-	putative stress response protein	NA	K7PKR6	Enterobacteria_phage	65.0	6.9e-22
VEB13005.1|3943730_3944453_-	putative prophage repressor protein	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
VEB13007.1|3944726_3945206_+	putative phage antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	2.3e-37
VEB13009.1|3945416_3946721_+	Hrp-dependent type III effector protein	NA	A0A077SLJ7	Escherichia_phage	46.2	2.6e-91
VEB13011.1|3946717_3947449_+	putative aldolase	NA	A0A077SK32	Escherichia_phage	54.7	2.6e-56
VEB13013.1|3947454_3948264_+	transcriptional regulator	NA	NA	NA	NA	NA
VEB13016.1|3948239_3949034_+	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
VEB13018.1|3949629_3949920_+	putative bacteriophage protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
VEB13020.1|3949965_3950583_+	putative ATP-binding protein	NA	NA	NA	NA	NA
VEB13022.1|3950587_3950782_+	putative bacteriophage protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
VEB13025.1|3950778_3952287_+|tail	putative bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	44.2	2.4e-104
VEB13027.1|3952308_3952677_+|tail	Phage tail tube protein	tail	NA	NA	NA	NA
VEB13029.1|3952678_3952978_+	bacteriophage protein	NA	NA	NA	NA	NA
VEB13031.1|3953098_3954592_+|coat	putative bacteriophage coat protein	coat	NA	NA	NA	NA
VEB13033.1|3954858_3956265_+	putative bacteriophage protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
VEB13035.1|3956261_3957317_+|tail	putative bacteriophage tail protein	tail	M1PVV2	Vibrio_phage	27.2	7.9e-38
VEB13037.1|3957332_3957929_+|plate	putative bacteriophage (baseplate assembly) protein	plate	NA	NA	NA	NA
VEB13039.1|3957925_3958381_+	putative bacteriophage protein GP46	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
VEB13041.1|3958384_3959521_+	putative bacteriophage protein	NA	B5TK75	Pseudomonas_phage	30.3	6.5e-30
VEB13043.1|3959517_3960120_+	bacteriophage protein GP48	NA	A0A2P9JZK7	Alteromonadaceae_phage	38.6	2.0e-33
VEB13045.1|3960216_3960996_+|tail	putative bacteriophage tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
>prophage 6
LR134163	Yersinia pseudotuberculosis strain NCTC10217 genome assembly, chromosome: 1	4687913	4524817	4573559	4687913	holin,plate,capsid,terminase,portal,integrase,transposase,tail	Salmonella_phage(44.12%)	69	4545934:4545948	4562216:4562230
VEB13854.1|4524817_4525033_-	Phage transcriptional activator, Ogr/Delta	NA	S4TNZ3	Salmonella_phage	60.6	1.1e-18
VEB13856.1|4525107_4526202_-	late control gene D protein	NA	A0A1S6KZZ5	Salmonella_phage	65.7	1.9e-127
VEB13858.1|4526198_4526660_-	phage P2 GpU	NA	E5G6Q2	Salmonella_phage	56.0	2.7e-43
VEB13861.1|4526674_4529590_-|tail	tail fiber component T of bacteriophage P2	tail	Q9ZXK0	Pseudomonas_virus	52.8	2.6e-155
VEB13863.1|4529716_4530064_-|tail	tail protein	tail	E5G6P9	Salmonella_phage	51.6	8.6e-18
VEB13865.1|4530117_4530633_-|tail	tail tube protein	tail	A0A218M4J0	Erwinia_phage	66.3	2.5e-61
VEB13867.1|4530644_4531820_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	79.8	1.3e-179
VEB13869.1|4531953_4532433_-|tail	putative tail fiber assembly protein	tail	F1BUP0	Erwinia_phage	41.9	1.2e-28
VEB13871.1|4532444_4533884_-|tail	tail fiber protein	tail	F1BUP1	Erwinia_phage	77.8	3.8e-75
VEB13873.1|4533880_4534489_-	bacteriophage P2 protein	NA	F1BUP2	Erwinia_phage	75.0	1.7e-85
VEB13875.1|4534481_4535390_-	bacteriophage P2-like protein	NA	F1BUP3	Erwinia_phage	73.2	1.3e-118
VEB13877.1|4535392_4535746_-|plate	phage baseplate assembly protein W	plate	A0A218M4K8	Erwinia_phage	59.3	2.4e-31
VEB13879.1|4535742_4536378_-|plate	phage baseplate assembly protein V	plate	O80314	Escherichia_phage	62.0	1.3e-64
VEB13881.1|4536498_4536621_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13883.1|4536708_4537404_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13885.1|4537486_4537717_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13887.1|4537735_4538182_-	O protein	NA	A0A1S6L001	Salmonella_phage	50.7	7.7e-35
VEB13889.1|4538178_4538646_-|tail	P2 phage tail completion protein R	tail	F1BUP9	Erwinia_phage	57.2	1.8e-42
VEB13891.1|4538744_4539170_-	putative LysB protein-like protein	NA	E5G6N2	Salmonella_phage	48.2	9.2e-22
VEB13893.1|4539174_4539570_-	bacteriophage P7-like protein	NA	A9DET4	Yersinia_phage	71.8	3.5e-47
VEB13895.1|4539556_4539943_-|holin	putative phage holin	holin	NA	NA	NA	NA
VEB13897.1|4539972_4540176_-|tail	WPhiphage-related tail protein	tail	E5G6M9	Salmonella_phage	70.1	1.8e-23
VEB13899.1|4540175_4540667_-	orf4 of phage P2 (gene L)	NA	A0A1S5NNA6	Burkholderia_phage	48.4	7.9e-33
VEB13901.1|4540900_4541554_-	R protein bacteriophage 186 gb|AAC34151.1|	NA	F1BUQ7	Erwinia_phage	46.8	1.7e-43
VEB13903.1|4541560_4542616_-|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	62.8	2.1e-123
VEB13905.1|4542652_4543468_-	V protein phage 186	NA	E5G6M5	Salmonella_phage	71.1	9.6e-76
VEB13907.1|4543638_4545402_+|terminase	gpP phage P2 terminase	terminase	A0A1S6KZW3	Salmonella_phage	63.6	3.1e-228
VEB13909.1|4545401_4546442_+|portal	PBSX family phage portal protein	portal	A0A077K9Q8	Ralstonia_phage	64.0	6.6e-130
4545934:4545948	attL	CTGAATATCTCGCCT	NA	NA	NA	NA
VEB13911.1|4547123_4547468_-	bacteriophage protein gp46	NA	NA	NA	NA	NA
VEB13913.1|4547464_4547695_-	phage-like protein	NA	NA	NA	NA	NA
VEB13915.1|4547675_4550231_-	phage replication protein	NA	E5G6L9	Salmonella_phage	37.9	8.9e-128
VEB13917.1|4550227_4550323_-	C-5 cytosine-specific DNA methylase	NA	NA	NA	NA	NA
VEB13919.1|4550319_4551138_-	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	55.9	1.5e-76
VEB13921.1|4551134_4551788_-	Orf81 bacteriophage 186	NA	A0A1D9C9N8	Salinivibrio_phage	62.9	3.0e-56
VEB13923.1|4551844_4552612_-	putative exported phage-related protein	NA	K7ZRM8	Xanthomonas_citri_phage	49.3	1.9e-09
VEB13925.1|4552694_4553000_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13927.1|4553030_4553291_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13929.1|4553301_4553448_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13931.1|4553432_4553747_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13933.1|4553743_4553950_-	phage-like protein	NA	NA	NA	NA	NA
VEB13935.1|4553961_4554165_-	DNA-binding protein	NA	NA	NA	NA	NA
VEB13937.1|4554177_4554369_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13939.1|4554429_4554798_+	prophage transcriptional regulator	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	39.8	5.2e-13
VEB13941.1|4554818_4556516_+	T5orf172 domain	NA	A0A142LP25	Marinitoga_camini_virus	62.5	9.0e-76
VEB13943.1|4556536_4556956_+|integrase	bacteriophage integrase	integrase	E5G6L0	Salmonella_phage	46.6	1.1e-22
VEB13945.1|4557024_4557405_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13947.1|4557404_4557737_+|integrase	bacteriophage integrase	integrase	E5G6L0	Salmonella_phage	47.3	1.9e-22
VEB13949.1|4558030_4558408_+|integrase	prophage integrase	integrase	Q94N03	Haemophilus_virus	67.5	2.7e-41
VEB13951.1|4558875_4559391_-|integrase	integrase	integrase	H9C152	Pectobacterium_phage	67.5	1.6e-60
VEB13953.1|4560122_4560245_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13954.1|4560268_4560415_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13956.1|4560488_4560662_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13958.1|4560853_4561036_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13960.1|4561065_4561272_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13962.1|4561297_4561642_-	hemolysin-coregulated protein	NA	NA	NA	NA	NA
VEB13964.1|4561861_4562821_-|transposase	putative transposase	transposase	NA	NA	NA	NA
4562216:4562230	attR	AGGCGAGATATTCAG	NA	NA	NA	NA
VEB13966.1|4562892_4563312_-|transposase	transposase IS3/IS911 family protein	transposase	NA	NA	NA	NA
VEB13968.1|4564144_4564273_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13970.1|4564331_4565600_+	MFS superfamliy multidrug-efflux transporter	NA	NA	NA	NA	NA
VEB13972.1|4565596_4567330_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA	NA
VEB13974.1|4567319_4567763_+	type 12 methyltransferase	NA	NA	NA	NA	NA
VEB13976.1|4567789_4568041_+	type 12 methyltransferase	NA	NA	NA	NA	NA
VEB13978.1|4568028_4568883_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEB13980.1|4568882_4569680_+	type 11 methyltransferase	NA	NA	NA	NA	NA
VEB13982.1|4569676_4570843_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
VEB13984.1|4570817_4571375_+	ribosomal-protein-alanine acetyltransferase	NA	NA	NA	NA	NA
VEB13986.1|4571404_4571707_-|transposase	transposase-like protein	transposase	NA	NA	NA	NA
VEB13988.1|4572044_4573004_-|transposase	putative transposase	transposase	NA	NA	NA	NA
VEB13990.1|4573229_4573559_-|transposase	ISAfe5, transposase OrfA	transposase	NA	NA	NA	NA
