assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635625.1_31436_B01	LR134151	Serratia plymuthica strain NCTC8900 genome assembly, chromosome: 1	1	467761-470441	1,1,1,2,2	PILER-CR,CRISPRCasFinder,CRT,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Type I-E	GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG	29,29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E	41,43,71,71,41	71	TypeI-E	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA|35aa|up_0|LR134151.1_467476_467581_+,NA|48aa|down_8|LR134151.1_481372_481516_+	NA|405aa|up_9|LR134151.1_459168_460383_+	PRK11099, PRK11099, putative inner membrane protein; Provisional	NA|80aa|up_8|LR134151.1_460379_460619_+	PRK11018, PRK11018, putative sulfurtransferase YedF	NA|289aa|up_7|LR134151.1_460627_461494_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|481aa|up_6|LR134151.1_461615_463058_+	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|338aa|up_5|LR134151.1_463101_464115_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|324aa|up_4|LR134151.1_464339_465311_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|385aa|up_3|LR134151.1_465292_466447_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|104aa|up_2|LR134151.1_466443_466755_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|260aa|up_1|LR134151.1_466697_467477_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|35aa|up_0|LR134151.1_467476_467581_+	NA	cas3|895aa|down_0|LR134151.1_470803_473488_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|527aa|down_1|LR134151.1_473507_475088_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|196aa|down_2|LR134151.1_475080_475668_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|354aa|down_3|LR134151.1_475689_476751_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|243aa|down_4|LR134151.1_476760_477489_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|230aa|down_5|LR134151.1_477488_478178_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|down_6|LR134151.1_478158_479079_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|down_7|LR134151.1_479078_479372_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|48aa|down_8|LR134151.1_481372_481516_+	NA	NA|212aa|down_9|LR134151.1_481531_482167_-	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional
GCA_900635625.1_31436_B01	LR134151	Serratia plymuthica strain NCTC8900 genome assembly, chromosome: 1	2	479457-481315	3,2,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	27,30,30	30	TypeI-E	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA|35aa|up_8|LR134151.1_467476_467581_+,NA|48aa|down_0|LR134151.1_481372_481516_+,NA|107aa|down_3|LR134151.1_483867_484188_+,NA|75aa|down_4|LR134151.1_484229_484454_+	NA|260aa|up_9|LR134151.1_466697_467477_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|35aa|up_8|LR134151.1_467476_467581_+	NA	cas3|895aa|up_7|LR134151.1_470803_473488_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|527aa|up_6|LR134151.1_473507_475088_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|196aa|up_5|LR134151.1_475080_475668_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|354aa|up_4|LR134151.1_475689_476751_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|243aa|up_3|LR134151.1_476760_477489_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|230aa|up_2|LR134151.1_477488_478178_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|up_1|LR134151.1_478158_479079_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LR134151.1_479078_479372_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|48aa|down_0|LR134151.1_481372_481516_+	NA	NA|212aa|down_1|LR134151.1_481531_482167_-	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional	NA|419aa|down_2|LR134151.1_482198_483455_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|107aa|down_3|LR134151.1_483867_484188_+	NA	NA|75aa|down_4|LR134151.1_484229_484454_+	NA	NA|293aa|down_5|LR134151.1_484511_485390_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|down_6|LR134151.1_485401_486397_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|174aa|down_7|LR134151.1_486624_487146_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|54aa|down_8|LR134151.1_487139_487301_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|116aa|down_9|LR134151.1_487294_487642_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]
GCA_900635625.1_31436_B01	LR134151	Serratia plymuthica strain NCTC8900 genome assembly, chromosome: 1	3	1448958-1449073	3	CRISPRCasFinder	no	WYL	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	Unclear	GCTGCAACTCGAAATCCATAGGGTTAGTTTTTCTTAA	37	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4	NA|192aa|up_5|LR134151.1_1440508_1441084_+,NA|127aa|up_4|LR134151.1_1441132_1441513_+,NA|256aa|down_9|LR134151.1_1457789_1458557_+	NA|311aa|up_9|LR134151.1_1436815_1437748_+	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein	NA|288aa|up_8|LR134151.1_1437806_1438670_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|300aa|up_7|LR134151.1_1438666_1439566_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|155aa|up_6|LR134151.1_1439683_1440148_+	COG4807, COG4807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|192aa|up_5|LR134151.1_1440508_1441084_+	NA	NA|127aa|up_4|LR134151.1_1441132_1441513_+	NA	NA|105aa|up_3|LR134151.1_1441634_1441949_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|623aa|up_2|LR134151.1_1442230_1444099_+	PRK08186, PRK08186, allophanate hydrolase; Provisional	NA|1208aa|up_1|LR134151.1_1444469_1448093_+	TIGR02712, Includes:_Allophanate_hydrolase, urea carboxylase	NA|230aa|up_0|LR134151.1_1448165_1448855_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|423aa|down_0|LR134151.1_1449112_1450381_+	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|100aa|down_1|LR134151.1_1450469_1450769_+	PRK13721, PRK13721, conjugal transfer ATP-binding protein TraC; Provisional	NA|430aa|down_2|LR134151.1_1450759_1452049_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|359aa|down_3|LR134151.1_1452048_1453125_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|269aa|down_4|LR134151.1_1453121_1453928_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|down_5|LR134151.1_1453937_1454636_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|171aa|down_6|LR134151.1_1454739_1455252_+	pfam09933, DUF2165, Predicted small integral membrane protein (DUF2165)	NA|571aa|down_7|LR134151.1_1455422_1457135_+	TIGR03397, acid_phos_Burk, acid phosphatase, Burkholderia-type	NA|171aa|down_8|LR134151.1_1457157_1457670_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|256aa|down_9|LR134151.1_1457789_1458557_+	NA
