The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	586	27047	4614415	plate,portal,terminase,holin,tail,capsid	Salmonella_phage(97.3%)	39	NA	NA
VEA30288.1|586_679_-|capsid,portal	probable capsid portal protein	capsid,portal	NA	NA	NA	NA
VEA30290.1|678_1629_-|capsid,portal	probable capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	93.7	8.4e-164
VEA30293.1|1628_3395_-|terminase	terminase, ATPase subunit	terminase	A0A1S6KZW3	Salmonella_phage	98.0	0.0e+00
VEA30296.1|3537_3939_+|capsid	phage capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	96.9	1.1e-64
VEA30299.1|3940_4369_+|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	100.0	3.4e-56
VEA30302.1|4582_5449_+|capsid	major capsid-like protein	capsid	A0A1S6KZZ3	Salmonella_phage	99.3	1.3e-160
VEA30305.1|5452_6103_+|terminase	terminase, endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	99.5	2.4e-114
VEA30308.1|6195_6660_+|capsid	putative capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	96.1	4.6e-83
VEA30311.1|6681_6861_+|tail	phage tail protein X	tail	E5G6M9	Salmonella_phage	100.0	1.4e-19
VEA30314.1|6864_7230_+|holin	holin family protein	holin	E5G6N0	Salmonella_phage	100.0	2.0e-28
VEA30317.1|7341_7569_+	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.3	6.4e-38
VEA30320.1|7573_7954_+	putative membrane protein	NA	A0A1S6KZZ2	Salmonella_phage	65.6	1.1e-26
VEA30323.1|7953_8217_+	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	100.0	3.9e-31
VEA30326.1|8220_8511_+	Fels-2 prophage protein	NA	A0A1S6KZX6	Salmonella_phage	99.0	2.5e-47
VEA30329.1|8473_8830_+|tail	tail fiber protein	tail	A0A1S6KZY0	Salmonella_phage	94.9	6.3e-56
VEA30332.1|8898_9345_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	91.1	7.6e-67
VEA30335.1|9413_9710_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	98.9	5.2e-48
VEA30338.1|9764_9911_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	100.0	6.6e-12
VEA30341.1|9986_10346_+|plate	phage baseplate assembly protein W	plate	E5G6N7	Salmonella_phage	95.8	1.2e-57
VEA30344.1|10332_10851_+|plate	phage baseplate assembly protein J	plate	E5G6N8	Salmonella_phage	96.3	1.3e-62
VEA30347.1|10793_11150_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	87.5	3.5e-38
VEA30350.1|11328_11823_+|tail	putative phage tail protein	tail	A0A1S6L000	Salmonella_phage	99.3	1.1e-87
VEA30353.1|11833_12247_+|tail	phage tail fiber protein	tail	A0A1S6KZZ8	Salmonella_phage	99.3	1.4e-70
VEA30356.1|12369_13497_+	hypothetical prophage protein	NA	A0A1S6KZZ0	Salmonella_phage	98.8	1.7e-147
VEA30359.1|13979_14663_-|tail	Phage tail fiber	tail	A0A1S6KZZ1	Salmonella_phage	97.2	1.2e-71
VEA30362.1|14739_15606_-|tail	Phage tail fiber	tail	A0A1S6KZZ8	Salmonella_phage	100.0	7.9e-161
VEA30365.1|15635_16193_+	DNA invertase-like protein	NA	A0A1S6L009	Salmonella_phage	98.4	5.5e-99
VEA30368.1|16295_16538_+|tail	major tail sheath protein	tail	E5G6P7	Salmonella_phage	100.0	6.4e-28
VEA30371.1|16684_17047_+|tail	major tail sheath protein	tail	E5G6P7	Salmonella_phage	98.2	1.8e-58
VEA30374.1|17067_17370_+|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.0	3.6e-52
VEA30377.1|17473_17989_+|tail	phage major tail tube protein FII	tail	A0A1S6L002	Salmonella_phage	98.2	5.1e-91
VEA30380.1|18043_18346_+|tail	phage tail protein E	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
VEA30383.1|18472_19705_+|tail	phage tail tape measure protein	tail	A0A1S6L010	Salmonella_phage	99.3	4.3e-152
VEA30386.1|19701_19905_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.0	1.7e-18
VEA30389.1|19937_21131_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.4	2.0e-199
VEA30392.1|21273_21645_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.1	3.7e-59
VEA30395.1|21756_22857_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	99.5	8.4e-200
VEA30398.1|23695_24886_-	Putative HlyD family secretion protein	NA	NA	NA	NA	NA
VEA30401.1|24866_27047_-	type I secretion protein, ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	9.9e-19
>prophage 2
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	132757	142706	4614415		Heterosigma_akashiwo_virus(12.5%)	16	NA	NA
VEA30744.1|132757_133636_-	Predicted esterase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	25.0	1.6e-15
VEA30747.1|133780_134584_-	extragenic suppressor protein SuhB	NA	NA	NA	NA	NA
VEA30750.1|134702_135434_+	RNA methyltransferase	NA	NA	NA	NA	NA
VEA30753.1|135593_136088_+	Iron-sulfur cluster regulator IscR	NA	NA	NA	NA	NA
VEA30756.1|136268_136628_+	L-cysteine desulfurase	NA	NA	NA	NA	NA
VEA30759.1|136629_137091_+	L-cysteine desulfurase	NA	A0A1X7C038	Faustovirus	41.9	8.2e-16
VEA30762.1|137065_137482_+	L-cysteine desulfurase	NA	NA	NA	NA	NA
VEA30764.1|137510_137816_+	NifU-like protein	NA	A0A218MKD1	uncultured_virus	77.5	8.1e-36
VEA30767.1|137924_138248_+	Iron binding protein IscA for iron-sulfur cluster assembly	NA	A0A2H4N7N5	Lake_Baikal_phage	48.6	4.1e-22
VEA30770.1|138443_138959_+	chaperone protein HscB	NA	NA	NA	NA	NA
VEA30773.1|138971_139430_+	chaperone protein HscA	NA	A0A2K9L0P4	Tupanvirus	36.9	7.9e-11
VEA30776.1|139426_140041_+	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.6e-38
VEA30779.1|139998_140820_+	chaperone protein HscA	NA	F2Y2E1	Organic_Lake_phycodnavirus	44.1	1.8e-37
VEA30782.1|140821_141157_+	ferredoxin	NA	NA	NA	NA	NA
VEA30785.1|141169_141346_+	FeS assembly protein IscX	NA	NA	NA	NA	NA
VEA30788.1|141422_142706_+	peptidase B	NA	Q6GYZ8	Mycoplasma_phage	38.2	1.2e-35
>prophage 3
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	306182	349256	4614415	portal,holin,protease,tail,coat,capsid	Salmonella_phage(48.28%)	62	NA	NA
VEA31335.1|306182_307121_+|protease	outer membrane protease	protease	NA	NA	NA	NA
VEA31338.1|307381_307585_-	Gene 18 protein	NA	C6ZR24	Salmonella_phage	97.0	2.7e-32
VEA31341.1|307553_307679_-	HTH Phage	NA	NA	NA	NA	NA
VEA31345.1|307681_308305_-	Phage EaC protein	NA	A0A220NQT7	Salmonella_phage	95.2	5.7e-113
VEA31348.1|308678_308975_-	Phage EaA protein	NA	K7P7E4	Enterobacteria_phage	90.2	6.8e-48
VEA31351.1|308944_309712_-	Eaa protein	NA	A0A1R3Y5Q8	Salmonella_virus	64.5	2.0e-51
VEA31354.1|309715_310189_-	DNA N-4 cytosine methyltransferase M.NgoMXV	NA	H9C170	Pectobacterium_phage	79.5	9.5e-68
VEA31357.1|310188_310938_-	prophage protein	NA	I6RSM9	Salmonella_phage	63.5	1.1e-57
VEA31360.1|310934_311336_-	Uncharacterised protein	NA	S4TTI6	Salmonella_phage	100.0	2.9e-73
VEA31363.1|311332_311839_-	Eae protein	NA	Q5G8U6	Enterobacteria_phage	80.2	1.3e-51
VEA31366.1|312016_312310_-	anti-RecBCD protein 2	NA	E7C9P8	Salmonella_phage	95.9	1.4e-48
VEA31369.1|312356_312641_-	anti-RecBCD	NA	Q76H41	Enterobacteria_phage	98.9	5.2e-45
VEA31372.1|312640_313348_-	recombinase	NA	I6R0N0	Salmonella_phage	88.9	1.2e-119
VEA31375.1|313344_313488_-	antibiotic ABC transporter permease	NA	A0A1R3Y5R4	Salmonella_virus	95.7	1.6e-18
VEA31378.1|313477_313666_-	Bacteriophage protein Kil	NA	I6S647	Salmonella_phage	100.0	3.7e-31
VEA31381.1|313646_313835_-	C3-like protein	NA	Q76H38	Enterobacteria_phage	100.0	2.3e-17
VEA31384.1|314012_314699_-	Gp53	NA	A0A2H4FRY7	Salmonella_phage	93.9	3.3e-85
VEA31388.1|314780_315083_-	antitermination protein	NA	I6S5Z3	Salmonella_phage	97.0	7.0e-48
VEA31391.1|315438_316143_-	LexA repressor	NA	Q8HAG7	Salmonella_phage	98.3	6.2e-132
VEA31394.1|316219_316435_+	Uncharacterized HTH-type transcriptional regulator AF_2414	NA	A0A0M4RTV8	Salmonella_phage	100.0	4.1e-34
VEA31396.1|316545_316827_+	regulatory protein	NA	Q76H54	Enterobacteria_phage	100.0	4.3e-44
VEA31399.1|316861_317008_+	Protein of uncharacterised function (DUF2740)	NA	A0A075B8K7	Enterobacteria_phage	100.0	1.5e-19
VEA31401.1|317000_317561_+	replication of DNA	NA	A0A1R3Y5R9	Salmonella_virus	94.7	1.2e-80
VEA31404.1|317428_317707_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA31407.1|317829_319206_+	DNA helicase	NA	Q76H51	Enterobacteria_phage	99.8	4.3e-254
VEA31410.1|319202_319472_+	prophage protein	NA	I6S1N5	Salmonella_phage	97.8	1.9e-44
VEA31413.1|319545_319986_+	ninB protein	NA	K7PKW7	Enterobacterial_phage	97.9	6.5e-79
VEA31415.1|319982_320855_+	phosphoadenosine phosphosulfate reductase family protein	NA	I6R0S6	Salmonella_phage	93.1	6.7e-168
VEA31417.1|321170_321590_+	protein ninX	NA	A0A088CQ65	Enterobacteria_phage	73.3	5.9e-53
VEA31420.1|321582_321759_+	Protein ninF	NA	A0A220NRM2	Escherichia_phage	96.6	1.7e-25
VEA31422.1|321751_321964_+	Uncharacterised protein	NA	K7PK10	Enterobacteria_phage	100.0	1.6e-35
VEA31425.1|321956_322247_+	putative bacteriophage protein	NA	A0A192Y6R9	Salmonella_phage	99.0	1.1e-50
VEA31427.1|322243_322606_+	endodeoxyribonuclease RUS	NA	K7P6I9	Enterobacteria_phage	99.2	3.5e-62
VEA31429.1|322787_323411_+	Phage antitermination protein Q	NA	K7PM87	Enterobacteria_phage	100.0	3.0e-114
VEA31431.1|323844_324171_+|holin	phage holin, lambda family	holin	Q5G8R5	Enterobacteria_phage	100.0	1.7e-52
VEA31436.1|324154_324592_+	phage lysozyme	NA	Q5G8R3	Enterobacteria_phage	97.2	4.1e-73
VEA31439.1|324588_325050_+	endopeptidase	NA	K7PJW6	Enterobacteria_phage	79.3	4.5e-54
VEA31442.1|325268_325790_+	putative KilA-N domain-containing protein L32	NA	K7P7K9	Enterobacteria_phage	98.8	5.5e-93
VEA31445.1|326263_326506_+	Orf80	NA	A0A0M4R322	Salmonella_phage	100.0	7.5e-37
VEA31448.1|326509_326899_+	Uncharacterised protein	NA	C6ZR72	Salmonella_phage	99.2	1.5e-74
VEA31451.1|326898_327303_+	Uncharacterised protein	NA	C6ZR73	Salmonella_phage	98.5	2.0e-66
VEA31454.1|327315_327774_+	Uncharacterised protein	NA	A0A2P1MXF5	Escherichia_phage	66.2	3.3e-49
VEA31457.1|327773_329177_+	Uncharacterised protein	NA	W6MW26	Pseudomonas_phage	75.9	1.1e-212
VEA31460.1|329280_330471_+|portal	portal protein	portal	I6R968	Salmonella_phage	100.0	8.2e-209
VEA31462.1|330443_331412_+|portal	portal protein	portal	A0A1R3Y5N6	Salmonella_virus	100.0	3.4e-152
VEA31464.1|331425_332337_+	scaffolding protein	NA	A0A1R3Y5R6	Salmonella_virus	99.7	1.1e-160
VEA31467.1|332336_333629_+|coat	coat protein	coat	Q76H21	Enterobacteria_phage	99.8	2.5e-243
VEA31470.1|333669_334230_+	prophage protein	NA	C6ZR11	Salmonella_phage	98.9	3.1e-102
VEA31474.1|334213_334714_+	Gp4	NA	I1TEJ0	Salmonella_phage	98.8	7.9e-89
VEA31477.1|334673_336092_+	DNA stabilization protein	NA	B9UDK6	Salmonella_phage	97.7	3.3e-273
VEA31480.1|336095_336797_+	gp26	NA	C6ZR14	Salmonella_phage	93.6	2.3e-70
VEA31483.1|336796_337252_+|capsid	Phage capsid and scaffold protein	capsid	I6R0L6	Salmonella_phage	99.3	3.9e-87
VEA31486.1|337254_337944_+	DNA transfer protein gp7	NA	B9UDK9	Salmonella_phage	93.4	6.6e-94
VEA31490.1|337953_339291_+	DNA transfer protein	NA	A0A220NR03	Salmonella_phage	95.3	8.3e-234
VEA31493.1|339290_341300_+	DNA transfer protein	NA	Q76H13	Enterobacteria_phage	87.4	0.0e+00
VEA31496.1|341455_343624_+|tail	Bifunctional tail protein	tail	F8UBT4	Escherichia_phage	61.1	1.9e-224
VEA31499.1|343651_345238_-	GtrC	NA	NA	NA	NA	NA
VEA31502.1|345418_346336_-	bactoprenol glucosyl transferase	NA	I1TED8	Salmonella_phage	88.2	2.1e-156
VEA31505.1|346301_346694_-	bactoprenol-linked glucose transferase	NA	B9UDL8	Salmonella_phage	89.2	5.9e-47
VEA31508.1|346830_347886_-	Tyrosine recombinase xerD	NA	C6ZR22	Salmonella_phage	96.0	8.9e-199
VEA31511.1|348315_348876_-	putative transport	NA	E7DYY8	Enterobacteria_phage	88.3	2.7e-85
VEA31515.1|348875_349256_-	putative transport	NA	E7DYY8	Enterobacteria_phage	86.1	6.9e-45
>prophage 4
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	571849	581096	4614415	tRNA	Enterobacteria_phage(75.0%)	14	NA	NA
VEA32300.1|571849_572797_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
VEA32303.1|572780_573512_+	putative permease transmembrane component	NA	NA	NA	NA	NA
VEA32306.1|573492_573600_-	membrane protein	NA	NA	NA	NA	NA
VEA32309.1|573659_574391_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
VEA32312.1|574613_575303_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	90.5	5.1e-94
VEA32315.1|575299_575794_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	97.4	2.3e-80
VEA32317.1|575790_576297_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	84.5	1.0e-75
VEA32320.1|576293_576404_+	two-component system response regulator	NA	NA	NA	NA	NA
VEA32323.1|576379_576883_+	two-component system response regulator	NA	NA	NA	NA	NA
VEA32326.1|576879_577011_+	two-component system response regulator	NA	NA	NA	NA	NA
VEA32329.1|577057_577525_+	Protein of uncharacterised function (DUF1456)	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
VEA32331.1|577581_578112_-	lipoprotein	NA	NA	NA	NA	NA
VEA32334.1|578333_578741_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	76.9	3.3e-37
VEA32336.1|578981_581096_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.4e-54
>prophage 5
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	820287	861606	4614415	integrase,transposase,terminase,tRNA	Klebsiella_phage(12.5%)	58	816590:816606	852904:852920
816590:816606	attL	GCGGAAGGAATAAAATA	NA	NA	NA	NA
VEA33210.1|820287_822060_+|tRNA	aspartyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEA33212.1|822275_822500_+	Dihydroneopterin triphosphate pyrophosphatase	NA	NA	NA	NA	NA
VEA33215.1|822445_822613_+	Dihydroneopterin triphosphate pyrophosphatase	NA	NA	NA	NA	NA
VEA33218.1|822642_823215_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA	NA
VEA33220.1|823238_823382_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA	NA
VEA33223.1|823359_823767_+	crossover junction endodeoxyribonuclease	NA	G3MA90	Bacillus_virus	34.8	6.2e-07
VEA33226.1|823717_823942_+	crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
VEA33228.1|824139_824541_-	protein yebB	NA	NA	NA	NA	NA
VEA33231.1|824749_825103_+	membrane protein	NA	NA	NA	NA	NA
VEA33234.1|825099_825441_+	membrane protein	NA	NA	NA	NA	NA
VEA33237.1|825892_826411_+	Holliday junction ATP-dependent DNA helicase ruvA	NA	NA	NA	NA	NA
VEA33240.1|826419_827430_+	Holliday junction DNA helicase	NA	A0A127AWE7	Bacillus_phage	25.9	2.4e-07
VEA33243.1|827508_828294_-	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA	NA
VEA33246.1|828370_828871_-	high-affinity zinc transporter ATPase	NA	R4TX06	Phaeocystis_globosa_virus	44.1	3.8e-06
VEA33249.1|828867_829047_-	high-affinity zinc transporter ATPase	NA	NA	NA	NA	NA
VEA33252.1|829068_829485_+	high-affinity zinc transporter periplasmic protein	NA	NA	NA	NA	NA
VEA33255.1|829468_829819_+	high-affinity zinc transporter periplasmic protein	NA	NA	NA	NA	NA
VEA33258.1|830085_830646_+	Cell wall endopeptidase family M23/M37	NA	NA	NA	NA	NA
VEA33261.1|830729_831404_+	Cell wall endopeptidase family M23/M37	NA	A8ATH6	Listeria_phage	40.9	1.3e-14
VEA33264.1|831520_832009_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA	NA
VEA33267.1|831989_832493_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA	NA
VEA33270.1|832564_834007_-	pyruvate kinase A	NA	NA	NA	NA	NA
VEA33273.1|834130_835000_-	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA	NA
VEA33276.1|835341_836145_+	glucose 6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	38.5	9.5e-44
VEA33279.1|836141_836807_+	glucose 6-phosphate dehydrogenase	NA	E3SJC5	Synechococcus_phage	34.8	2.3e-27
VEA33283.1|837051_838017_+	6-phosphogluconate dehydratase	NA	NA	NA	NA	NA
VEA33286.1|837964_838864_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
VEA33289.1|838901_839543_+	KHG/KDPG aldolase	NA	NA	NA	NA	NA
VEA33292.1|839642_839819_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
VEA33295.1|839815_840061_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
VEA33298.1|840020_840821_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
VEA33301.1|840951_841146_+	DNA damage-inducible gene in SOS regulon-dependent on cyclic AMP and H-NS	NA	NA	NA	NA	NA
VEA33304.1|841310_841628_+	protein YebF	NA	NA	NA	NA	NA
VEA33307.1|841758_842418_+	inner membrane protein YebE	NA	NA	NA	NA	NA
VEA33310.1|842630_844034_+	oligopeptidase	NA	NA	NA	NA	NA
VEA33313.1|844036_844681_+	oligopeptidase	NA	NA	NA	NA	NA
VEA33315.1|844715_845414_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
VEA33319.1|845437_846094_-	Putative amido hydrolase	NA	NA	NA	NA	NA
VEA33322.1|846201_846432_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
VEA33326.1|846569_846944_+	Copper resistance protein CopC	NA	NA	NA	NA	NA
VEA33329.1|846944_847820_+	membrane protein	NA	NA	NA	NA	NA
VEA33332.1|847836_848190_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA	NA
VEA33335.1|848572_848998_-|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	48.9	8.3e-31
VEA33338.1|849058_849652_-|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	55.7	2.2e-53
VEA33341.1|849648_850920_-	exonuclease VIII	NA	Q9QF34	Lambdoid_phage	66.7	7.7e-56
VEA33344.1|851069_851603_+	exported phage protein	NA	A0A291LBG9	Klebsiella_phage	42.4	1.6e-10
VEA33348.1|851871_852039_-	lytic enzyme	NA	NA	NA	NA	NA
VEA33351.1|852341_852833_+|terminase	terminase	terminase	Q9EYD0	Enterobacteria_phage	56.2	7.6e-44
VEA33354.1|853018_853393_+|terminase	phage terminase large subunit	terminase	Q8VNN7	Enterobacteria_phage	83.7	2.6e-60
852904:852920	attR	GCGGAAGGAATAAAATA	NA	NA	NA	NA
VEA33357.1|853385_854723_+	Tail Fiber Protein	NA	E5G6P0	Salmonella_phage	52.1	3.8e-77
VEA33360.1|856711_856978_+	phage encoded protein PagM	NA	NA	NA	NA	NA
VEA33363.1|857159_857282_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA33366.1|857729_858344_-	disulfide bond formation protein	NA	NA	NA	NA	NA
VEA33369.1|858353_858512_-	membrane protein	NA	NA	NA	NA	NA
VEA33372.1|858644_859559_-	drug/metabolite transporter DMT permease	NA	NA	NA	NA	NA
VEA33376.1|860350_860875_-	fimbriae usher protein	NA	NA	NA	NA	NA
VEA33379.1|860891_861305_+|transposase	transposase, Mutator family protein	transposase	I6RSM4	Salmonella_phage	87.7	6.4e-20
VEA33382.1|861267_861606_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	1482253	1540119	4614415	integrase,terminase,holin,transposase,tail	Salmonella_phage(31.88%)	87	1488124:1488139	1505352:1505367
VEA35644.1|1482253_1482493_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
VEA35647.1|1482710_1482875_-|transposase	transposase	transposase	NA	NA	NA	NA
VEA35650.1|1483372_1484182_+	cytolethal distending toxin subunit CdtB	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
VEA35653.1|1484254_1484632_+	Protein of uncharacterised function (DUF1353)	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
VEA35656.1|1484779_1485322_-	Predicted lysozyme (DUF847)	NA	A0A0U2S643	Escherichia_phage	67.0	8.1e-71
VEA35659.1|1485514_1486243_-	Pertussis toxin, subunit 1 subfamily	NA	A0A0U2KD26	Escherichia_phage	52.0	4.6e-61
VEA35662.1|1486258_1486672_-	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	37.7	3.2e-19
VEA35665.1|1487277_1487535_+|transposase	transposase subfamily protein	transposase	NA	NA	NA	NA
VEA35668.1|1487494_1488085_+|transposase	transposase IS3	transposase	S5WIU1	Leptospira_phage	37.6	9.5e-17
1488124:1488139	attL	CGCAGGAAAAACTCGG	NA	NA	NA	NA
VEA35671.1|1488504_1489293_+	EnvF	NA	NA	NA	NA	NA
VEA35674.1|1489614_1489821_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35677.1|1489919_1490012_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35680.1|1490288_1491413_-	bacteriophage protein	NA	NA	NA	NA	NA
VEA35683.1|1491859_1492072_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.5e-20
VEA35687.1|1492325_1492997_+	Gifsy-2 prophage protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.9	1.1e-80
VEA35690.1|1492989_1493193_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	83.3	7.2e-25
VEA35694.1|1493315_1495427_-	SspH1	NA	Q9MBL9	Phage_Gifsy-2	46.2	1.1e-25
VEA35697.1|1495598_1496423_-|integrase	integrase	integrase	A0A077SLK2	Escherichia_phage	82.4	4.7e-131
VEA35700.1|1496533_1496683_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35703.1|1496985_1497144_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35706.1|1498537_1499992_-|tail	side tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	74.0	1.4e-45
VEA35709.1|1499981_1500191_-	Protein of uncharacterised function (DUF2612)	NA	NA	NA	NA	NA
VEA35712.1|1500177_1500585_-	Protein of uncharacterised function (DUF2612)	NA	A0A2R3UAM9	Myoviridae_environmental_samples	37.7	1.6e-18
VEA35715.1|1500586_1500820_-	Uncharacterised protein	NA	A0A077KGW9	Edwardsiella_phage	34.7	7.1e-08
VEA35718.1|1500771_1501827_-	bacteriophage protein	NA	A0A077KGW9	Edwardsiella_phage	50.9	1.3e-80
VEA35721.1|1501823_1502180_-	Uncharacterised protein	NA	A0A077KCA1	Edwardsiella_phage	49.1	9.5e-20
VEA35724.1|1502192_1502624_-	Mu-like prophage protein gp45	NA	A0A077KAY0	Edwardsiella_phage	36.7	8.8e-20
VEA35726.1|1502637_1502871_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35729.1|1502851_1503721_-	Uncharacterised protein	NA	A0A077KC17	Edwardsiella_phage	32.4	2.6e-31
VEA35732.1|1503717_1504020_-	Uncharacterised protein	NA	A0A077K9U4	Edwardsiella_phage	49.5	7.0e-24
VEA35735.1|1504019_1504730_-	Uncharacterised protein	NA	A0A077KGW3	Edwardsiella_phage	34.6	6.5e-28
VEA35738.1|1504726_1506046_-	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	67.1	8.6e-50
1505352:1505367	attR	CCGAGTTTTTCCTGCG	NA	NA	NA	NA
VEA35741.1|1506500_1506968_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35743.1|1507264_1507513_-	Uncharacterised protein	NA	H9C0W7	Aeromonas_phage	44.9	9.2e-06
VEA35746.1|1507512_1507959_-	Uncharacterised protein	NA	Q2NPD1	Xanthomonas_phage	40.4	4.8e-21
VEA35749.1|1508038_1508347_-	Protein of uncharacterised function (DUF3383)	NA	NA	NA	NA	NA
VEA35752.1|1508313_1508691_-	Protein of uncharacterised function (DUF3383)	NA	A0A077KGV4	Edwardsiella_phage	44.1	6.9e-21
VEA35755.1|1508657_1509443_-	Protein of uncharacterised function (DUF3383)	NA	E2GLU1	Acinetobacter_phage	31.1	3.0e-18
VEA35758.1|1509484_1509967_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35761.1|1509951_1510317_-	Uncharacterised protein	NA	A0A077KAW7	Edwardsiella_phage	40.5	3.0e-21
VEA35764.1|1510313_1510898_-	Mu-like prophage protein gpG	NA	H9C0W2	Aeromonas_phage	29.8	6.1e-16
VEA35767.1|1510836_1511337_-	Uncharacterised protein	NA	A0A068CGG9	Acinetobacter_phage	40.6	2.6e-15
VEA35770.1|1511343_1511682_-	Uncharacterised protein	NA	H9C0V9	Aeromonas_phage	40.2	2.9e-10
VEA35773.1|1511675_1512722_-	Uncharacterised protein	NA	A0A219YBB0	Aeromonas_phage	48.6	4.0e-82
VEA35776.1|1512721_1513204_-	Uncharacterised protein	NA	K4HYQ5	Acinetobacter_phage	41.2	5.8e-20
VEA35779.1|1513205_1513805_-	Uncharacterised protein	NA	A0A219YBB9	Aeromonas_phage	28.3	9.7e-09
VEA35782.1|1513837_1514212_-	Uncharacterized protein conserved in bacteria	NA	A0A219YBB9	Aeromonas_phage	51.8	1.3e-22
VEA35785.1|1514175_1515237_-	putative bacteriophage protein	NA	H9C0V1	Aeromonas_phage	48.7	1.3e-56
VEA35788.1|1515277_1516174_-	Phage-associated protein	NA	Q6UJ14	Burkholderia_virus	49.2	5.2e-75
VEA35791.1|1516277_1516505_-	Protein of uncharacterised function (DUF1073)	NA	NA	NA	NA	NA
VEA35794.1|1516800_1517019_-	gp33 TerL	NA	A0A0M5M1R6	Salmonella_phage	75.0	1.9e-15
VEA35797.1|1516981_1518421_-	gp33 TerL	NA	A0A0M5M1R6	Salmonella_phage	81.3	6.6e-237
VEA35800.1|1518423_1519050_-|terminase	putative prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	98.1	1.8e-106
VEA35803.1|1519124_1519805_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35806.1|1519859_1520333_-	lysozyme	NA	Q56118	Enterobacteria_phage	68.7	3.4e-49
VEA35809.1|1520329_1520782_-	Lysozyme	NA	A0A0M4R365	Salmonella_phage	98.7	4.6e-80
VEA35812.1|1520765_1521101_-|holin	bacteriophage holin	holin	A0A0M3ULK9	Salmonella_phage	100.0	4.1e-57
VEA35815.1|1521583_1522057_+	GogA	NA	Q9MBM2	Phage_Gifsy-1	100.0	2.4e-87
VEA35818.1|1522966_1523530_-	antirepressor	NA	A0A0P0ZC44	Stx2-converting_phage	92.2	7.6e-56
VEA35821.1|1523802_1524480_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	53.6	3.8e-62
VEA35824.1|1524448_1524616_-	DNA breaking-rejoining protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	8.6e-08
VEA35827.1|1524612_1525224_-	bacteriophage Lambda NinG protein	NA	A0A0M4RU10	Salmonella_phage	97.0	2.7e-91
VEA35830.1|1525226_1525433_-	Phage protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
VEA35833.1|1525432_1525873_-	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.3	1.7e-79
VEA35836.1|1525865_1526036_-	bacteriophage protein	NA	S4TTI0	Salmonella_phage	100.0	1.4e-21
VEA35839.1|1526435_1526669_-	Gifsy-1 prophage DinI	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
VEA35842.1|1526824_1527091_-	bacteriophage protein	NA	H6WRY4	Salmonella_phage	100.0	2.6e-46
VEA35845.1|1527188_1528019_-	Eaa protein	NA	A0A220NQT9	Salmonella_phage	78.7	1.7e-72
VEA35847.1|1528032_1528728_-	replication protein O of prophage CP-933X	NA	G8C7U6	Escherichia_phage	45.9	4.2e-56
VEA35850.1|1528724_1529219_-	replication protein O	NA	K7PGT1	Enterobacteria_phage	56.5	3.7e-22
VEA35852.1|1529234_1529561_-	replication protein O	NA	A0A0M5M7Y1	Salmonella_phage	65.6	5.4e-30
VEA35855.1|1529652_1529973_-	repressor	NA	A0A0M4RU01	Salmonella_phage	100.0	1.3e-52
VEA35858.1|1529992_1530220_-	phage regulatory protein	NA	K7PKS2	Enterobacteria_phage	95.9	1.5e-34
VEA35861.1|1530233_1530701_+	DNA-binding protein	NA	K7PHG0	Enterobacteria_phage	86.5	4.2e-68
VEA35864.1|1530743_1531169_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35867.1|1531170_1531380_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA35870.1|1531632_1531839_-	bacteriophage protein	NA	K7P7I0	Enterobacteria_phage	69.1	9.6e-17
VEA35873.1|1532237_1532396_+	DNA breaking-rejoining protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
VEA35876.1|1532893_1533328_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	95.8	4.0e-73
VEA35879.1|1533342_1535331_+	exonuclease VIII	NA	S4TNL0	Salmonella_phage	60.5	3.0e-171
VEA35881.1|1535323_1536028_+	recombination and repair protein RecT	NA	A0A1P8DTF2	Proteus_phage	75.5	1.3e-89
VEA35884.1|1536184_1536424_+	Uncharacterised protein	NA	A0A222YY67	Escherichia_phage	52.9	2.0e-18
VEA35887.1|1536504_1536837_+	bacteriophage protein	NA	S4TNP2	Salmonella_phage	74.2	3.8e-15
VEA35890.1|1536833_1537337_+	Eaa protein	NA	A0A075B8H2	Enterobacteria_phage	92.3	6.0e-36
VEA35893.1|1537386_1537623_+	excisionase	NA	NA	NA	NA	NA
VEA35896.1|1537612_1538755_+	Integrase	NA	O21929	Phage_21	80.3	8.2e-174
VEA35899.1|1538868_1540119_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	1.1e-19
>prophage 7
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	1752054	1800602	4614415	integrase,transposase,protease,tRNA	Bacillus_phage(13.04%)	63	1749361:1749375	1772346:1772360
1749361:1749375	attL	CAATAACCACCAGCG	NA	NA	NA	NA
VEA36666.1|1752054_1752738_-|integrase	integrase	integrase	Q6H9S3	Enterobacteria_phage	33.9	5.9e-18
VEA36669.1|1752908_1753310_-|transposase	ISPsy11, transposase OrfA	transposase	NA	NA	NA	NA
VEA36672.1|1753422_1753707_-	integration host factor beta-subunit	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
VEA36675.1|1753862_1755536_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
VEA36678.1|1755649_1756333_-	cytidylate kinase	NA	NA	NA	NA	NA
VEA36681.1|1756697_1757267_-	lipoprotein	NA	NA	NA	NA	NA
VEA36684.1|1757410_1758694_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
VEA36687.1|1758764_1759853_-	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.5	2.8e-78
VEA36690.1|1760038_1760731_-	Putative inner membrane protein	NA	NA	NA	NA	NA
VEA36694.1|1760983_1762159_+	UPF0142 protein	NA	NA	NA	NA	NA
VEA36697.1|1762167_1762629_+	UPF0142 protein	NA	NA	NA	NA	NA
VEA36700.1|1763033_1763792_+	formate transporter	NA	NA	NA	NA	NA
VEA36703.1|1763951_1764125_+	formate acetyltransferase 1	NA	NA	NA	NA	NA
VEA36706.1|1764124_1765657_+	formate acetyltransferase 1	NA	A0A2P0VNR5	Tetraselmis_virus	46.1	1.4e-123
VEA36709.1|1765604_1766174_+	formate acetyltransferase 1	NA	NA	NA	NA	NA
VEA36713.1|1766306_1767266_-	pathogenicity island 1 protein SopD2	NA	NA	NA	NA	NA
VEA36716.1|1767549_1767717_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
VEA36719.1|1767842_1768640_+	pyruvate formate-lyase activating enzyme	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	2.7e-22
VEA36722.1|1768931_1770353_-	transport protein	NA	NA	NA	NA	NA
VEA36726.1|1770569_1771718_-	transport protein	NA	NA	NA	NA	NA
VEA36729.1|1772067_1772931_-	anaerobic dimethyl sulfoxide reductase subunit C	NA	NA	NA	NA	NA
1772346:1772360	attR	CAATAACCACCAGCG	NA	NA	NA	NA
VEA36732.1|1772932_1773550_-	anaerobic dimethyl sulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	5.6e-76
VEA36735.1|1773560_1775783_-	anaerobic dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.7	1.8e-209
VEA36738.1|1775809_1776004_-	anaerobic dimethyl sulfoxide reductase subunit A	NA	NA	NA	NA	NA
VEA36741.1|1776240_1776426_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	59.3	7.1e-11
VEA36744.1|1776508_1777531_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	38.5	6.0e-51
VEA36747.1|1777789_1778563_-	Holliday junction DNA helicase	NA	NA	NA	NA	NA
VEA36750.1|1778549_1779014_-	Holliday junction DNA helicase	NA	G3MBE0	Bacillus_virus	48.9	2.9e-29
VEA36752.1|1779269_1779422_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA	NA
VEA36755.1|1779806_1780163_-	DNA translocase ftsK	NA	J7I0T4	Pseudomonas_phage	47.9	7.5e-09
VEA36758.1|1780217_1781417_-	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.3	3.5e-82
VEA36761.1|1781409_1781850_-	cell division protein FtsK	NA	NA	NA	NA	NA
VEA36764.1|1781846_1782068_-	DNA translocase FtsK	NA	NA	NA	NA	NA
VEA36767.1|1782009_1782330_-	cell division protein FtsK	NA	NA	NA	NA	NA
VEA36770.1|1782610_1783486_-	DNA translocase ftsK	NA	NA	NA	NA	NA
VEA36773.1|1783545_1783773_-	DNA translocase ftsK	NA	NA	NA	NA	NA
VEA36776.1|1784115_1784610_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
VEA36779.1|1785156_1786125_+	thioredoxin reductase	NA	A0A2I2L5E1	Orpheovirus	45.5	6.5e-63
VEA36782.1|1786239_1787622_+	cysteine/glutathione ABC transporter membrane /ATP-binding component	NA	A0A2H4UU96	Bodo_saltans_virus	34.9	9.4e-07
VEA36785.1|1787566_1788046_+	cysteine/glutathione ABC transporter membrane /ATP-binding component	NA	W8CYL7	Bacillus_phage	40.0	3.6e-06
VEA36789.1|1788011_1788254_+	transport ATP-binding protein CydC	NA	NA	NA	NA	NA
VEA36792.1|1788210_1788453_+	transport ATP-binding protein CydC	NA	NA	NA	NA	NA
VEA36795.1|1788452_1788719_+	transport ATP-binding protein CydC	NA	NA	NA	NA	NA
VEA36797.1|1788690_1789737_+	transport ATP-binding protein CydC	NA	W8CYL7	Bacillus_phage	25.5	4.5e-09
VEA36800.1|1789781_1790261_+|tRNA	leucyl/phenylalanyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
VEA36803.1|1790211_1790487_+|tRNA	leucyl/phenylalanyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
VEA36807.1|1790798_1791017_+	initiation factor IF-1	NA	NA	NA	NA	NA
VEA36810.1|1791107_1791716_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEA36814.1|1791654_1792020_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEA36817.1|1792128_1792419_+	pirin-like protein	NA	NA	NA	NA	NA
VEA36820.1|1792582_1792987_+	pirin-like protein	NA	NA	NA	NA	NA
VEA36823.1|1793121_1793685_+	Isochorismatase family protein	NA	NA	NA	NA	NA
VEA36826.1|1794417_1794987_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	45.1	1.3e-42
VEA36829.1|1795103_1795568_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA36832.1|1795764_1796076_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1S6UBG5	Serratia_phage	61.4	2.5e-16
VEA36835.1|1796050_1796581_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	NA	NA	NA	NA
VEA36838.1|1796611_1796932_-|protease	ATP-dependent clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
VEA36841.1|1797255_1797477_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
VEA36844.1|1797541_1798036_-	ABC transporter	NA	NA	NA	NA	NA
VEA36847.1|1798058_1798412_-	ABC transporter	NA	NA	NA	NA	NA
VEA36850.1|1798625_1799078_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	50.8	3.3e-09
VEA36853.1|1799046_1799556_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	35.1	3.6e-12
VEA36857.1|1799552_1800602_-	Macrolide-specific efflux protein MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.3e-08
>prophage 8
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	2165249	2217963	4614415	transposase,protease,tRNA	Moraxella_phage(21.43%)	56	NA	NA
VEA38313.1|2165249_2165729_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
VEA38316.1|2165845_2167498_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
VEA38319.1|2167670_2168891_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
VEA38322.1|2169104_2169446_+	transport protein	NA	NA	NA	NA	NA
VEA38325.1|2169445_2170525_+	transport protein	NA	NA	NA	NA	NA
VEA38328.1|2170491_2170779_+	transport protein	NA	NA	NA	NA	NA
VEA38331.1|2170827_2172132_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
VEA38334.1|2172283_2173255_+	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	6.6e-15
VEA38337.1|2173251_2174214_-	ferrochelatase	NA	NA	NA	NA	NA
VEA38340.1|2174398_2175043_-	adenylate kinase	NA	NA	NA	NA	NA
VEA38343.1|2175418_2176612_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	35.8	6.5e-65
VEA38346.1|2176608_2177271_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	46.6	3.8e-46
VEA38349.1|2177381_2177987_-	recombination protein RecR	NA	NA	NA	NA	NA
VEA38352.1|2178213_2178312_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
VEA38355.1|2178358_2178634_-	DNA polymerase III subunits gamma and tau	NA	NA	NA	NA	NA
VEA38357.1|2179131_2180046_-	DNA polymerase III subunits gamma and tau	NA	E7DN81	Pneumococcus_phage	41.1	4.4e-29
VEA38360.1|2180392_2180944_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
VEA38363.1|2181096_2181474_-	Inner membrane protein YbaN	NA	NA	NA	NA	NA
VEA38366.1|2181554_2182070_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
VEA38368.1|2182083_2182251_+	Putative inner membrane protein	NA	NA	NA	NA	NA
VEA38371.1|2182320_2183244_+|transposase	ISNCY transposase	transposase	Q2A0A7	Sodalis_phage	51.2	1.6e-63
VEA38375.1|2183285_2186648_-	integral membrane protein AefA	NA	NA	NA	NA	NA
VEA38378.1|2186766_2187420_-	potential acrAB operon repressor	NA	NA	NA	NA	NA
VEA38381.1|2187561_2188755_+	acriflavin resistance protein A	NA	NA	NA	NA	NA
VEA38384.1|2188777_2191927_+	acriflavin resistance protein B	NA	NA	NA	NA	NA
VEA38387.1|2192422_2192797_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
VEA38390.1|2192824_2193043_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
VEA38393.1|2193221_2193773_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
VEA38396.1|2193890_2194361_+	Putative inner membrane protein	NA	NA	NA	NA	NA
VEA38399.1|2194416_2194557_-	LSU ribosomal protein L36p	NA	NA	NA	NA	NA
VEA38402.1|2194562_2194823_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEA38405.1|2195047_2196598_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
VEA38408.1|2196905_2197217_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
VEA38411.1|2197249_2197819_-	lipoprotein	NA	NA	NA	NA	NA
VEA38414.1|2198033_2198381_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
VEA38417.1|2198343_2198877_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
VEA38420.1|2198993_2200280_-	ammonium transporter	NA	NA	NA	NA	NA
VEA38423.1|2200311_2200650_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
VEA38426.1|2200862_2202644_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	26.7	5.4e-39
VEA38429.1|2202636_2204409_-	ABC transporter ATP-binding membrane protein	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
VEA38432.1|2204449_2204908_-	transcriptional regulator	NA	NA	NA	NA	NA
VEA38435.1|2205045_2205579_+	lyase	NA	NA	NA	NA	NA
VEA38438.1|2205575_2206076_+	lyase	NA	NA	NA	NA	NA
VEA38441.1|2206125_2206944_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
VEA38444.1|2207281_2208745_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEA38446.1|2208809_2209505_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.4	9.3e-88
VEA38449.1|2209613_2210012_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA	NA
VEA38452.1|2210123_2210489_-	competence protein ComEA	NA	NA	NA	NA	NA
VEA38454.1|2210638_2211136_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
VEA38457.1|2211095_2211989_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
VEA38460.1|2211982_2212378_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
VEA38463.1|2213279_2214572_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	64.3	2.1e-157
VEA38466.1|2214553_2214847_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	57.5	4.9e-22
VEA38469.1|2214798_2215632_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	30.2	2.3e-24
VEA38472.1|2215817_2217089_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	5.6e-131
VEA38475.1|2217339_2217963_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
>prophage 9
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	2949323	2958698	4614415	protease,tRNA	Lactococcus_phage(50.0%)	13	NA	NA
VEA41087.1|2949323_2950055_-|tRNA	putative tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
VEA41089.1|2950145_2950448_-	ribonuclease R (RNase R)	NA	NA	NA	NA	NA
VEA41091.1|2950444_2951830_-	ribonuclease R (RNase R)	NA	Q0GXV6	Lactococcus_phage	33.8	1.6e-62
VEA41093.1|2951859_2952582_-	ribonuclease R (RNase R)	NA	NA	NA	NA	NA
VEA41095.1|2952619_2953045_-	transcriptional regulator	NA	NA	NA	NA	NA
VEA41097.1|2953264_2954563_-	adenylosuccinate synthetase	NA	W5S5V7	Pithovirus	35.6	8.4e-66
VEA41098.1|2954665_2954863_-	membrane protein	NA	NA	NA	NA	NA
VEA41100.1|2954940_2955945_-|protease	FtsH protease regulator HflC	protease	NA	NA	NA	NA
VEA41102.1|2955947_2956886_-|protease	protease	protease	NA	NA	NA	NA
VEA41104.1|2956882_2957206_-|protease	protease	protease	NA	NA	NA	NA
VEA41106.1|2957437_2957761_-|protease	GTP-binding subunit of protease	protease	NA	NA	NA	NA
VEA41108.1|2957760_2958417_-|protease	GTP-binding subunit of protease	protease	NA	NA	NA	NA
VEA41110.1|2958374_2958698_-|protease	GTP-binding subunit of protease	protease	NA	NA	NA	NA
>prophage 10
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	3770905	3776759	4614415	tRNA	Vibrio_phage(33.33%)	6	NA	NA
VEA43001.1|3770905_3771298_-	membrane protein	NA	A0A2I7SAW6	Vibrio_phage	52.1	9.4e-29
VEA43002.1|3771257_3771572_-	membrane protein	NA	A0A2I7SAW6	Vibrio_phage	57.8	1.4e-19
VEA43005.1|3771651_3771987_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	tRNA	A0A140XB86	Dickeya_phage	83.3	8.4e-10
VEA43008.1|3772010_3773654_-	methyl-accepting chemotaxis citrate transducer	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.3	1.8e-12
VEA43010.1|3773853_3776052_-	heavy metal-transporting ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	7.2e-110
VEA43011.1|3776132_3776759_-	putative enzyme yhhN	NA	A0A140XAH6	Dickeya_phage	64.6	3.8e-32
>prophage 11
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	4533378	4538432	4614415		Corynebacterium_phage(33.33%)	6	NA	NA
VEA44662.1|4533378_4534581_-	glycine betaine/L-proline transport ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.8	1.4e-27
VEA44663.1|4534935_4535895_-	ribonucleoside-diphosphate reductase 2 subunit beta	NA	A0A0M4S3B4	Mycobacterium_phage	71.2	8.8e-129
VEA44664.1|4535905_4536901_-	ribonucleoside-diphosphate reductase 2 subunit alpha	NA	A0A2H4P903	Corynebacterium_phage	49.1	2.6e-83
VEA44665.1|4536934_4537348_-	ribonucleoside-diphosphate reductase 2 subunit alpha	NA	A7IYE5	Corynebacterium_phage	63.8	8.4e-44
VEA44666.1|4537356_4538022_-	ribonucleoside-diphosphate reductase 2 subunit alpha	NA	A0A096XT50	Enterococcus_phage	52.8	7.9e-52
VEA44667.1|4538021_4538432_-	ribonucleotide reductase stimulatory protein	NA	A0A142F1R4	Bacillus_phage	41.8	4.3e-16
>prophage 12
LR134149	Salmonella enterica subsp. enterica strain NCTC8272 genome assembly, chromosome: 1	4614415	4580003	4613569	4614415	plate,integrase,portal,terminase,head,holin,tail,capsid	Salmonella_phage(100.0%)	54	4578603:4578649	4613973:4614019
4578603:4578649	attL	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
VEA44714.1|4580003_4580807_-|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	99.6	1.4e-135
VEA44715.1|4580810_4581443_-	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	99.5	3.3e-116
VEA44716.1|4581562_4581805_+	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	100.0	1.1e-38
VEA44717.1|4581837_4582347_+	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	96.4	6.4e-86
VEA44718.1|4582535_4582994_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA44719.1|4583213_4583555_+	Uncharacterised protein	NA	E5G6L5	Salmonella_phage	85.0	4.2e-49
VEA44720.1|4583622_4583856_+	putative 8.8 kDa protein in GpA 5'region	NA	A0A1S6L021	Salmonella_phage	84.4	2.0e-26
VEA44721.1|4583855_4584083_+	C4-type zinc finger protein, DksA/TraR family	NA	A0A1S6L007	Salmonella_phage	90.7	3.3e-34
VEA44722.1|4584079_4584937_+	retron adenine methylase	NA	A0A1S6L011	Salmonella_phage	80.0	1.3e-128
VEA44723.1|4584927_4587336_+	Bacteriophage replication gene A protein (GPA)	NA	A0A1S6L028	Salmonella_phage	94.9	0.0e+00
VEA44724.1|4587317_4587479_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA44725.1|4587493_4587682_+	bacteriophage protein	NA	A0A1S6L006	Salmonella_phage	100.0	2.7e-26
VEA44726.1|4587693_4587924_+	bacteriophage sos operon Tum protein	NA	A0A1S6L014	Salmonella_phage	85.3	8.5e-30
VEA44727.1|4588140_4588656_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA44728.1|4588652_4589537_+	bacteriophage protein	NA	NA	NA	NA	NA
VEA44729.1|4590007_4591264_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEA44730.1|4591304_4592348_-|capsid,portal	probable capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	91.0	1.0e-183
VEA44731.1|4592340_4592775_-|terminase	terminase, ATPase subunit	terminase	E5G6M4	Salmonella_phage	98.7	8.8e-36
VEA44732.1|4592726_4594112_-|terminase	terminase, ATPase subunit	terminase	A0A1S6KZW3	Salmonella_phage	98.0	1.1e-265
VEA44733.1|4594254_4594635_+|capsid	phage capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	99.2	3.4e-60
VEA44734.1|4594588_4595089_+|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	100.0	1.5e-66
VEA44735.1|4595105_4596170_+|capsid	major capsid-like protein	capsid	A0A1S6KZZ3	Salmonella_phage	99.7	1.9e-196
VEA44736.1|4596173_4596920_+|terminase	terminase, endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	99.0	2.5e-107
VEA44737.1|4596916_4597036_+|head	phage head completion protein	head	E5G6M8	Salmonella_phage	100.0	1.8e-15
VEA44738.1|4597032_4597380_+|capsid	putative capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	94.8	2.0e-59
VEA44739.1|4597379_4597598_+|tail	phage tail protein X	tail	E5G6M9	Salmonella_phage	100.0	1.6e-33
VEA44740.1|4597587_4597875_+|holin	holin family protein	holin	E5G6N0	Salmonella_phage	100.0	2.6e-28
VEA44741.1|4598027_4598294_+	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.1	1.1e-33
VEA44742.1|4598290_4598521_+	putative membrane protein	NA	A0A1S6KZZ2	Salmonella_phage	97.4	1.5e-34
VEA44743.1|4598665_4598938_+	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	100.0	2.1e-35
VEA44744.1|4599307_4599562_+|tail	tail fiber protein	tail	A0A1S6KZY0	Salmonella_phage	100.0	1.6e-37
VEA44745.1|4599609_4600056_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	91.1	7.6e-67
VEA44746.1|4600318_4600627_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	99.0	1.2e-50
VEA44747.1|4600696_4600963_+|plate	phage baseplate assembly protein W	plate	A0A1S6KZZ4	Salmonella_phage	98.3	9.5e-25
VEA44748.1|4601043_4601259_+|plate	phage baseplate assembly protein J	plate	E5G6N8	Salmonella_phage	95.3	4.5e-25
VEA44749.1|4602235_4602376_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA44750.1|4602544_4602697_+|tail	phage tail fiber protein	tail	A0A1S6KZZ8	Salmonella_phage	95.6	7.8e-16
VEA44751.1|4603471_4603945_+	hypothetical prophage protein	NA	A0A1S6KZZ8	Salmonella_phage	99.4	5.4e-87
VEA44752.1|4604035_4604233_+|tail	Phage tail fiber	tail	A0A1S6KZZ8	Salmonella_phage	87.0	3.5e-16
VEA44753.1|4604201_4604552_+|tail	Phage tail fiber	tail	A0A1S6KZZ1	Salmonella_phage	97.2	7.5e-54
VEA44754.1|4604741_4605329_-|tail	phage tail-fiber asembly protein	tail	A0A1S6KZY8	Salmonella_phage	99.0	7.8e-112
VEA44755.1|4605328_4606318_-|tail	Phage tail fiber	tail	A0A1S6KZZ0	Salmonella_phage	99.1	2.0e-192
VEA44756.1|4606347_4606905_+	DNA invertase-like protein	NA	A0A1S6L009	Salmonella_phage	98.4	5.5e-99
VEA44757.1|4607007_4608180_+|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	2.2e-222
VEA44758.1|4608189_4608705_+|tail	phage major tail tube protein FII	tail	A0A1S6L002	Salmonella_phage	98.2	5.1e-91
VEA44759.1|4608759_4609062_+|tail	phage tail protein E	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
VEA44760.1|4609188_4610649_+|tail	phage tail tape measure protein	tail	A0A1S6L010	Salmonella_phage	99.6	1.2e-188
VEA44761.1|4610656_4610854_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	100.0	4.0e-20
VEA44762.1|4610853_4611111_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	76.5	1.6e-16
VEA44763.1|4611286_4611649_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	93.9	4.1e-55
VEA44764.1|4611989_4612139_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	100.0	3.4e-16
VEA44765.1|4612164_4612473_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	98.0	5.8e-42
VEA44766.1|4612469_4612649_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	100.0	4.1e-24
VEA44767.1|4612891_4613569_+	regulator of late gene expression	NA	E5G6Q3	Salmonella_phage	98.7	7.1e-117
4613973:4614019	attR	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
