The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	1406	8399	4759612		Bacillus_virus(33.33%)	9	NA	NA
VEA16381.1|1406_2507_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	34.7	4.1e-53
VEA16383.1|2654_3437_+	recF protein	NA	NA	NA	NA	NA
VEA16385.1|3447_3729_+	recF protein	NA	NA	NA	NA	NA
VEA16387.1|3757_4300_+	DNA gyrase subunit B	NA	A0A172JHT4	Bacillus_phage	39.7	2.2e-28
VEA16389.1|4386_5070_+	DNA gyrase subunit B	NA	G4KKP9	Yersinia_phage	36.5	8.2e-20
VEA16391.1|5141_5627_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	42.9	2.6e-20
VEA16393.1|5710_6121_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	61.7	6.0e-10
VEA16395.1|6197_7094_-	putative LysR-family transcriptioanl regulator	NA	NA	NA	NA	NA
VEA16397.1|7208_8399_-	mandelate racemase	NA	Q6A202	Oenococcus_phage	31.8	7.3e-48
>prophage 2
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	1066403	1073912	4759612	tRNA	Pseudomonas_phage(16.67%)	7	NA	NA
VEA18600.1|1066403_1066901_+	competence damage-inducible protein A	NA	B5TK85	Pseudomonas_phage	51.6	4.4e-31
VEA18602.1|1066985_1067603_+	recombinase A	NA	A0A0S2MVG1	Bacillus_phage	68.1	4.1e-63
VEA18604.1|1067577_1068048_+	recombinase A	NA	A0A2D1GPX2	Mycobacterium_phage	64.6	1.5e-41
VEA18605.1|1068125_1068665_+	Regulatory protein recX	NA	NA	NA	NA	NA
VEA18606.1|1068900_1071531_+|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	38.3	3.5e-79
VEA18607.1|1071765_1071951_+	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	66.7	4.9e-12
VEA18609.1|1073345_1073912_+	Phosphatase YqaB	NA	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	27.6	7.2e-14
>prophage 3
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	1672108	1681279	4759612	tRNA	Enterobacteria_phage(75.0%)	12	NA	NA
VEA19885.1|1672108_1673056_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
VEA19889.1|1673039_1673498_+	putative permease transmembrane component	NA	NA	NA	NA	NA
VEA19891.1|1673494_1673770_+	putative permease transmembrane component	NA	NA	NA	NA	NA
VEA19894.1|1673750_1673858_-	membrane protein	NA	NA	NA	NA	NA
VEA19897.1|1673917_1674151_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	1.1e-11
VEA19900.1|1674221_1674650_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.2	2.9e-63
VEA19903.1|1674872_1676558_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	1.4e-278
VEA19906.1|1676554_1677274_+	two-component system response regulator	NA	NA	NA	NA	NA
VEA19909.1|1677320_1677788_+	Protein of uncharacterised function (DUF1456)	NA	Q9EYF4	Enterobacteria_phage	90.3	1.8e-74
VEA19912.1|1677844_1678375_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	31.7	1.6e-15
VEA19915.1|1678546_1679005_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
VEA19918.1|1679245_1681279_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.4e-54
>prophage 4
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	1698243	1701111	4759612	protease	Phage_TP(66.67%)	6	NA	NA
VEA19972.1|1698243_1698867_-	T3SS effector NleB	NA	Q8HAB2	Salmonella_phage	77.3	5.8e-89
VEA19975.1|1698874_1699252_-	phage protein	NA	Q8HAB2	Salmonella_phage	73.6	7.1e-50
VEA19977.1|1699743_1699971_-|protease	putative protease	protease	Q6DW11	Phage_TP	86.7	5.6e-34
VEA19980.1|1700247_1700388_-|protease	putative protease	protease	Q6DW11	Phage_TP	97.6	4.2e-16
VEA19983.1|1700395_1700599_-|protease	putative protease	protease	Q6DW11	Phage_TP	96.6	2.4e-28
VEA19986.1|1700661_1701111_-|protease	putative protease	protease	Q6DW11	Phage_TP	98.1	3.0e-23
>prophage 5
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	1755541	1761839	4759612		Enterobacteria_phage(50.0%)	6	NA	NA
VEA20145.1|1755541_1756945_+	Colanic acid biosynthesis protein wcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
VEA20149.1|1757122_1758016_+	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
VEA20152.1|1758392_1759478_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
VEA20155.1|1759477_1760377_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
VEA20158.1|1760488_1761304_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	62.3	2.6e-97
VEA20161.1|1761308_1761839_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	56.5	1.8e-51
>prophage 6
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	3311893	3370154	4759612	transposase,protease,tRNA	Bacillus_phage(25.0%)	51	NA	NA
VEA24512.1|3311893_3312811_+|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	protease	NA	NA	NA	NA
VEA24514.1|3312807_3313260_+|protease	Putative activity regulator of membraneprotease YbbK	protease	NA	NA	NA	NA
VEA24516.1|3313260_3313677_-	copper efflux regulator	NA	NA	NA	NA	NA
VEA24518.1|3313786_3316288_+	Lead cadmium zinc and mercury transporting ATPase	NA	A0A218MNH6	uncultured_virus	37.2	5.1e-112
VEA24520.1|3316443_3317271_+	Secreted protein	NA	NA	NA	NA	NA
VEA24522.1|3318352_3318832_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
VEA24524.1|3318948_3320601_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
VEA24526.1|3320773_3321994_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
VEA24528.1|3322005_3322131_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEA24530.1|3322208_3323885_+	transport protein	NA	NA	NA	NA	NA
VEA24532.1|3323933_3325283_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
VEA24534.1|3325390_3326362_+	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	8.6e-15
VEA24536.1|3326358_3327321_-	ferrochelatase	NA	NA	NA	NA	NA
VEA24538.1|3327549_3328194_-	adenylate kinase	NA	NA	NA	NA	NA
VEA24540.1|3328435_3330310_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.9	1.7e-115
VEA24542.1|3330420_3331026_-	recombination protein RecR	NA	NA	NA	NA	NA
VEA24544.1|3331025_3331355_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
VEA24546.1|3333441_3333993_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
VEA24548.1|3334145_3334523_-	Inner membrane protein YbaN	NA	NA	NA	NA	NA
VEA24550.1|3334603_3335119_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
VEA24552.1|3335132_3335300_+	Putative inner membrane protein	NA	NA	NA	NA	NA
VEA24554.1|3335369_3336305_+|transposase	ISNCY transposase	transposase	Q2A0A7	Sodalis_phage	51.2	6.3e-63
VEA24556.1|3336346_3339709_-	integral membrane protein AefA	NA	NA	NA	NA	NA
VEA24558.1|3339827_3340481_-	potential acrAB operon repressor	NA	NA	NA	NA	NA
VEA24560.1|3340622_3341816_+	acriflavin resistance protein A	NA	NA	NA	NA	NA
VEA24562.1|3341838_3344988_+	acriflavin resistance protein B	NA	NA	NA	NA	NA
VEA24564.1|3345483_3345858_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
VEA24566.1|3345885_3346104_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
VEA24568.1|3346282_3346834_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
VEA24569.1|3346951_3347422_+	Putative inner membrane protein	NA	NA	NA	NA	NA
VEA24571.1|3347623_3347884_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEA24573.1|3348108_3349659_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
VEA24575.1|3349967_3350279_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
VEA24577.1|3350311_3350881_-	lipoprotein	NA	NA	NA	NA	NA
VEA24579.1|3351095_3351956_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
VEA24581.1|3352055_3353342_-	ammonium transporter	NA	NA	NA	NA	NA
VEA24583.1|3353373_3353712_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
VEA24585.1|3353924_3355706_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	26.7	5.4e-39
VEA24588.1|3355698_3357471_-	ABC transporter ATP-binding membrane protein	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
VEA24590.1|3357511_3357970_-	transcriptional regulator	NA	NA	NA	NA	NA
VEA24592.1|3358082_3359138_+	lyase	NA	NA	NA	NA	NA
VEA24594.1|3359120_3360005_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
VEA24596.1|3360105_3361806_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEA24598.1|3361870_3362566_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.4	1.2e-87
VEA24600.1|3362671_3363070_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA	NA
VEA24602.1|3363173_3363548_-	competence protein ComEA	NA	NA	NA	NA	NA
VEA24604.1|3363620_3365570_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
VEA24606.1|3365860_3366133_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
VEA24608.1|3366341_3368696_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	52.5	1.6e-224
VEA24610.1|3368881_3369637_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.4	1.9e-73
VEA24612.1|3369602_3370154_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	51.7	4.7e-42
>prophage 7
LR134146	Salmonella enterica subsp. enterica strain NCTC6759 genome assembly, chromosome: 1	4759612	4195403	4207997	4759612		uncultured_Caudovirales_phage(58.33%)	16	NA	NA
VEA26531.1|4195403_4196438_-	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	58.2	8.9e-111
VEA26532.1|4196487_4197768_-	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	60.0	5.8e-144
VEA26533.1|4197803_4198244_-	umuDC operon protein-like protein	NA	A0A1W6JNS2	Morganella_phage	53.3	3.6e-29
VEA26534.1|4198437_4199337_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
VEA26535.1|4199435_4199963_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	37.1	7.2e-16
VEA26536.1|4199959_4201192_+	MFS transporter	NA	NA	NA	NA	NA
VEA26537.1|4201240_4201576_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
VEA26538.1|4201572_4202118_+	NADPH-dependent FMN reductase	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	60.9	1.4e-43
VEA26539.1|4202065_4202296_+	NADPH-dependent FMN reductase	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	81.6	3.9e-27
VEA26540.1|4202352_4202781_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.0	6.2e-50
VEA26541.1|4202830_4203250_-	arylsulfatase	NA	A0A2H4J144	uncultured_Caudovirales_phage	76.8	1.4e-54
VEA26542.1|4203206_4204115_-	arylsulfatase	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.8	2.6e-106
VEA26543.1|4204211_4204565_-	ArsR family transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	57.3	2.2e-21
VEA26544.1|4204827_4205286_-	Zn(II)-responsive regulator	NA	NA	NA	NA	NA
VEA26545.1|4205365_4207120_+	heavy metal-transporting ATPase	NA	E4ZFI9	Streptococcus_phage	47.0	9.3e-68
VEA26546.1|4207154_4207997_+	heavy metal-transporting ATPase	NA	E4ZFI9	Streptococcus_phage	44.2	2.3e-56
