assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635555.1_31108_G01	LR134143	Salmonella enterica subsp. enterica strain NCTC7411 genome assembly, chromosome: 1	2	939332-939848	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCACCAGCGGGGATAAACC,GTGTTCCCCGCACCAGCGGGGATAAACCG,GTGTTCCCCGCACCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	7,8,8	8	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|381aa|up_9|LR134143.1_926532_927675_+	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]	NA|919aa|up_8|LR134143.1_927718_930475_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|169aa|up_7|LR134143.1_930532_931039_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|276aa|up_6|LR134143.1_931001_931829_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_5|LR134143.1_931880_934115_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_4|LR134143.1_934189_934981_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|LR134143.1_935208_936846_+	PRK05380, pyrG, CTP synthetase; Validated	NA|65aa|up_2|LR134143.1_936928_937123_+	PRK00077, eno, enolase; Provisional	NA|340aa|up_1|LR134143.1_937209_938229_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|LR134143.1_938364_939036_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|82aa|down_0|LR134143.1_939945_940191_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|LR134143.1_940834_941197_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|LR134143.1_941632_943432_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|LR134143.1_943431_945144_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|LR134143.1_945245_945980_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|930aa|down_5|LR134143.1_946322_949112_+	NF033178, auto_BigA, autotransporter adhesin BigA	NA|223aa|down_6|LR134143.1_949204_949873_+	PRK10336, PRK10336, two-component system response regulator QseB	NA|457aa|down_7|LR134143.1_949865_951236_+	PRK10337, PRK10337, sensor protein QseC; Provisional	cas3|901aa|down_8|LR134143.1_951293_953996_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|247aa|down_9|LR134143.1_954419_955160_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1
GCA_900635555.1_31108_G01	LR134143	Salmonella enterica subsp. enterica strain NCTC7411 genome assembly, chromosome: 1	3	960394-962311	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTTTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTNTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	29,31,31	31	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|457aa|up_9|LR134143.1_949865_951236_+	PRK10337, PRK10337, sensor protein QseC; Provisional	cas3|901aa|up_8|LR134143.1_951293_953996_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|247aa|up_7|LR134143.1_954419_955160_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas8e|228aa|up_6|LR134143.1_955143_955827_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|201aa|up_5|LR134143.1_955973_956576_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|353aa|up_4|LR134143.1_956598_957657_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|242aa|up_3|LR134143.1_957666_958392_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|235aa|up_2|LR134143.1_958391_959096_+	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|up_1|LR134143.1_959095_960013_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|LR134143.1_960015_960300_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|161aa|down_0|LR134143.1_962325_962808_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|191aa|down_1|LR134143.1_962800_963373_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_2|LR134143.1_963622_964531_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_3|LR134143.1_964540_965980_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_4|LR134143.1_965966_966572_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|86aa|down_5|LR134143.1_966622_966880_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|161aa|down_6|LR134143.1_967137_967620_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|187aa|down_7|LR134143.1_967616_968177_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_8|LR134143.1_968176_968656_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_9|LR134143.1_968652_969702_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed
