The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	726793	734613	2759837		Hokovirus(16.67%)	10	NA	NA
VDZ92038.1|726793_727849_-	Sensor histidine protein kinase SaeS (exoprotein expression protein S)	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
VDZ92039.1|727848_728535_-	Response regulator SaeR	NA	NA	NA	NA	NA
VDZ92040.1|728509_728983_-	DoxX family protein	NA	NA	NA	NA	NA
VDZ92041.1|729324_729765_-	lipoprotein	NA	NA	NA	NA	NA
VDZ92042.1|730044_730629_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92043.1|730727_731441_-	Queuosine Biosynthesis QueE Radical SAM	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
VDZ92044.1|731444_731864_-	6-pyruvoyl-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
VDZ92045.1|731865_732534_-	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
VDZ92046.1|732884_733478_+	Para-aminobenzoate synthase, amidotransferase component PabAb	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
VDZ92047.1|733461_734613_+	Para-aminobenzoate synthetase component I	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
>prophage 2
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	746584	761314	2759837		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
VDZ92056.1|746584_747643_+	histidinol-phosphate aminotransferase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
VDZ92057.1|747516_747798_-	Protein of uncharacterised function (DUF3125)	NA	NA	NA	NA	NA
VDZ92058.1|747937_748480_+	5'-3'-deoxyribonucleotidase, putative	NA	NA	NA	NA	NA
VDZ92059.1|749159_750077_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
VDZ92060.1|750345_751851_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
VDZ92061.1|752191_752692_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
VDZ92062.1|752711_753578_-	Integral membrane domain protein	NA	NA	NA	NA	NA
VDZ92063.1|754378_754777_+	Nrdi	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
VDZ92064.1|754739_756845_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
VDZ92065.1|756962_757934_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
VDZ92066.1|758599_759613_+	FatD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
VDZ92067.1|759599_760556_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
VDZ92068.1|760552_761314_+	Iron compound ABC uptake transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	840014	860388	2759837	terminase,transposase,integrase	Staphylococcus_phage(81.82%)	28	842551:842567	857650:857666
VDZ92144.1|840014_841040_+	Methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	1.2e-27
VDZ92145.1|841032_841728_+	Methionine ABC transporter permease protein	NA	NA	NA	NA	NA
VDZ92146.1|841745_842567_+	Methionine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
842551:842567	attL	TTATTCCTGCTAAATAA	NA	NA	NA	NA
VDZ92147.1|842709_843930_-|integrase	prophage L54a integrase	integrase	Q4ZE80	Staphylococcus_phage	47.3	4.6e-98
VDZ92148.1|844017_844746_-	enterotoxin	NA	A0EX09	Staphylococcus_phage	31.8	1.6e-21
VDZ92149.1|844769_845498_-	staphylococcal enterotoxin Q	NA	A0EX09	Staphylococcus_phage	35.4	7.9e-29
VDZ92150.1|845672_846407_-	Helix-turn-helix XRE-family like protein	NA	Q4ZE79	Staphylococcus_phage	98.4	8.5e-132
VDZ92151.1|846556_846769_+	pathogenicity island protein	NA	Q4ZE78	Staphylococcus_phage	98.6	3.4e-33
VDZ92152.1|846769_847042_+	pathogenicity island DNA-binding protein	NA	Q4ZE77	Staphylococcus_phage	100.0	3.4e-46
VDZ92153.1|847053_847200_+	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
VDZ92154.1|847192_847402_+	pathogenicity island protein	NA	Q4ZE76	Staphylococcus_phage	95.7	7.7e-30
VDZ92155.1|847404_847725_+	mobile element-associated DUF1474-containing protein, putative	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.5e-20
VDZ92156.1|847791_848661_+	pathogenicity island protein	NA	A0A1W6JQL5	Staphylococcus_phage	95.5	3.0e-160
VDZ92157.1|848677_850135_+	pathogenicity island protein	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	4.6e-278
VDZ92158.1|850436_850799_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	93.3	1.2e-62
VDZ92159.1|850800_851085_+	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	92.6	1.4e-45
VDZ92160.1|851081_851723_+	mobile element-associated protein, putative	NA	Q4ZE67	Staphylococcus_phage	94.4	7.7e-113
VDZ92161.1|852296_852638_+	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	97.3	5.4e-57
VDZ92162.1|852649_853228_+|transposase	transposase	transposase	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
VDZ92163.1|853245_853464_+	hypothetical mobile element-associated protein	NA	NA	NA	NA	NA
VDZ92164.1|853466_854042_+	pathogenicity island protein	NA	Q4ZE87	Staphylococcus_phage	95.4	1.7e-87
VDZ92165.1|854044_854386_+|transposase	transposase	transposase	A0A1W6JQM3	Staphylococcus_phage	96.5	2.1e-56
VDZ92166.1|854382_854952_+|terminase	putative phage terminase	terminase	Q4ZE85	Staphylococcus_phage	98.4	4.6e-101
VDZ92167.1|855228_856197_+	abortive infection bacteriophage resistance protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
VDZ92168.1|856431_856986_-	secreted protein Ear	NA	A0A1W6JQE5	Staphylococcus_phage	76.1	4.8e-71
VDZ92169.1|858019_858214_+	CsbD-like protein	NA	NA	NA	NA	NA
857650:857666	attR	TTATTCCTGCTAAATAA	NA	NA	NA	NA
VDZ92170.1|858447_859299_-	membrane protein	NA	NA	NA	NA	NA
VDZ92171.1|859626_860388_+	iron-sulfur cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 4
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1020100	1028573	2759837		Synechococcus_phage(33.33%)	9	NA	NA
VDZ92316.1|1020100_1020583_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
VDZ92317.1|1020569_1021694_+	Phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
VDZ92318.1|1021697_1022402_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
VDZ92319.1|1022401_1022665_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
VDZ92320.1|1022666_1023338_+	Phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
VDZ92321.1|1023330_1025520_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
VDZ92322.1|1025498_1026983_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
VDZ92323.1|1026975_1028004_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
VDZ92324.1|1028006_1028573_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1284755	1302704	2759837	head,terminase,portal,integrase	Staphylococcus_phage(54.17%)	34	1278479:1278496	1304695:1304712
1278479:1278496	attL	ATTCAATCATTAATATAT	NA	NA	NA	NA
VDZ92557.1|1284755_1285883_-|integrase	integrase family protein	integrase	A0A0C5AN64	Paenibacillus_phage	31.4	6.2e-33
VDZ92558.1|1285935_1286631_-	host cell surface-exposed lipofamily protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	50.3	3.6e-07
VDZ92559.1|1286642_1287026_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92560.1|1287172_1287565_-	helix-turn-helix family protein	NA	A0A2I6PE55	Staphylococcus_phage	53.6	1.6e-28
VDZ92561.1|1287732_1287951_+	regulatory protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
VDZ92562.1|1287977_1288253_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92563.1|1288257_1288392_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92564.1|1288422_1288542_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92565.1|1288517_1288688_+	Uncharacterised protein	NA	Q4ZDZ8	Staphylococcus_virus	89.3	2.4e-21
VDZ92566.1|1288676_1288883_-	Uncharacterised protein	NA	A1BTY8	Staphylococcus_virus	75.0	3.3e-25
VDZ92567.1|1288943_1289627_+	prophage, antirepressor, putative	NA	A9CR56	Staphylococcus_phage	85.6	5.2e-107
VDZ92568.1|1289725_1289887_+	phage protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
VDZ92569.1|1289973_1290291_+	phage protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
VDZ92570.1|1290280_1290547_+	phage protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.0e-18
VDZ92571.1|1290551_1291088_+	glycosyl hydrolases 17 family protein	NA	A0A0H3U480	Staphylococcus_phage	82.5	1.7e-76
VDZ92572.1|1291088_1291868_+	bacterial dnaA family protein	NA	A0A1W6JPW0	Staphylococcus_phage	87.6	6.7e-127
VDZ92573.1|1291894_1292443_+	Single stranded DNA-binding protein,phage-associated	NA	A7TWM8	Staphylococcus_phage	92.9	1.1e-91
VDZ92574.1|1292455_1293358_+	dnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	52.0	2.9e-49
VDZ92575.1|1293358_1293649_+	PVL orf 51-like protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	7.2e-18
VDZ92576.1|1293663_1293828_+	phage protein	NA	A0A0E3T9L7	Staphylococcus_phage	88.9	1.1e-18
VDZ92577.1|1293827_1294139_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92578.1|1294131_1294662_+	mazG nucleotide pyrophosphohydrolase domain protein	NA	A0A1P8VVP1	Streptococcus_phage	38.2	5.2e-22
VDZ92579.1|1294907_1295372_+	Uncharacterised protein	NA	C9E2P0	Enterococcus_phage	43.0	3.2e-20
VDZ92580.1|1295372_1295606_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92581.1|1295648_1296137_+	sigma-70, region 4 family protein	NA	R9TMH4	Paenibacillus_phage	27.7	4.3e-07
VDZ92582.1|1296289_1296718_+	homeo-like domain protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
VDZ92583.1|1296704_1297979_+|terminase	phage terminase, large subunit, PBSX family	terminase	Q4ZE37	Staphylococcus_virus	76.4	1.9e-195
VDZ92584.1|1297991_1299440_+|portal	phage portal protein, SPP1 family	portal	Q4ZE36	Staphylococcus_virus	69.4	7.4e-196
VDZ92585.1|1299429_1300962_+|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	Q4ZE35	Staphylococcus_virus	61.6	1.9e-109
VDZ92586.1|1300967_1301090_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92587.1|1301249_1301462_+	Phage protein	NA	NA	NA	NA	NA
VDZ92588.1|1301581_1301851_+	Phage protein	NA	NA	NA	NA	NA
VDZ92589.1|1301863_1301986_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ92590.1|1302242_1302704_+	Uncharacterised protein	NA	A0A1J0MF61	Staphylococcus_phage	46.0	3.8e-29
1304695:1304712	attR	ATATATTAATGATTGAAT	NA	NA	NA	NA
>prophage 6
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1573064	1581394	2759837	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
VDZ92828.1|1573064_1573850_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
VDZ92829.1|1573975_1574866_-	endonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
VDZ92830.1|1574875_1576222_-	ATP-dependent RNA helicase YqfR	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
VDZ92831.1|1576335_1577436_-	NIF3 protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
VDZ92832.1|1577438_1578116_-|tRNA	Putative tRNA-m1A22 methylase	tRNA	NA	NA	NA	NA
VDZ92833.1|1578246_1579353_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
VDZ92834.1|1579576_1581394_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
>prophage 7
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1649227	1658270	2759837	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
VDZ92906.1|1649227_1649746_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
VDZ92907.1|1649767_1652041_-	Single-stranded-DNA-specific exonuclease recJ	NA	A7KV88	Bacillus_phage	28.8	5.2e-63
VDZ92908.1|1652243_1654523_-	Protein-export membrane protein secD / Protein-export membrane protein secF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
VDZ92909.1|1654797_1655058_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
VDZ92910.1|1655076_1656216_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
VDZ92911.1|1656238_1657264_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
VDZ92912.1|1657265_1658270_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1783576	1852241	2759837	protease,tRNA	Staphylococcus_phage(95.83%)	66	NA	NA
VDZ93016.1|1783576_1790137_-	LPXTG-motif cell wall anchor domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.9	1.3e-308
VDZ93017.1|1790462_1790774_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
VDZ93018.1|1790795_1793213_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
VDZ93019.1|1793500_1794682_-	Multidrug resistance protein	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
VDZ93020.1|1794791_1795745_+	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
VDZ93021.1|1795741_1796305_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
VDZ93022.1|1796424_1796826_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
VDZ93023.1|1797397_1798225_-	Lysophospholipase; Monoglyceride lipase; putative	NA	NA	NA	NA	NA
VDZ93024.1|1798458_1799460_+	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
VDZ93025.1|1799581_1800046_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
VDZ93026.1|1800058_1801240_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	1.5e-226
VDZ93027.1|1801250_1801883_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
VDZ93028.1|1801889_1802921_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
VDZ93029.1|1803413_1804916_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
VDZ93030.1|1805438_1805753_+	arsenical resistance operon repressor 2	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
VDZ93031.1|1805752_1807045_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	9.4e-227
VDZ93032.1|1807131_1807986_-	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
VDZ93033.1|1808261_1808486_-	putative staphylococcal protein	NA	NA	NA	NA	NA
VDZ93034.1|1808684_1809155_+	RNA polymerase sigma factor sigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
VDZ93035.1|1809267_1809711_+	comK family protein	NA	NA	NA	NA	NA
VDZ93036.1|1809697_1810141_-	putative staphylococcal protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
VDZ93037.1|1810436_1811072_+|protease	CAAX amino terminal protease	protease	NA	NA	NA	NA
VDZ93038.1|1811511_1812225_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
VDZ93039.1|1812484_1812787_+	membrane protein	NA	NA	NA	NA	NA
VDZ93040.1|1813042_1813408_+	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
VDZ93041.1|1813404_1813758_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	100.0	2.6e-22
VDZ93042.1|1814140_1814974_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	100.0	5.4e-159
VDZ93043.1|1815185_1816094_-	Uncharacterised protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
VDZ93044.1|1816218_1817412_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
VDZ93045.1|1817783_1819376_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
VDZ93046.1|1819753_1820524_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.1e-142
VDZ93047.1|1820504_1820984_-	phosphohydrolase	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
VDZ93048.1|1821043_1821301_+	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
VDZ93049.1|1821297_1822299_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.2e-186
VDZ93050.1|1822303_1823782_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.4	8.1e-283
VDZ93051.1|1823940_1824423_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	4.6e-78
VDZ93052.1|1824734_1825349_+	endonuclease	NA	A0A2H4PQM8	Staphylococcus_phage	87.3	9.5e-36
VDZ93053.1|1825429_1826425_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	98.8	6.2e-77
VDZ93054.1|1826500_1827127_+	lipoprotein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	5.3e-90
VDZ93055.1|1827167_1827509_+	Uncharacterised protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
VDZ93056.1|1827609_1828182_+	Uncharacterised protein	NA	A0A2H4PQN4	Staphylococcus_phage	96.6	1.1e-25
VDZ93057.1|1828378_1828936_-	Domain of uncharacterised function (DUF955)	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.7e-77
VDZ93058.1|1829308_1829485_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ93059.1|1830594_1830849_-	exported protein	NA	NA	NA	NA	NA
VDZ93060.1|1830917_1831037_-	putative protein with DUF1433	NA	NA	NA	NA	NA
VDZ93061.1|1831036_1831480_-	exported protein	NA	NA	NA	NA	NA
VDZ93062.1|1831479_1831923_-	putative protein with DUF1433	NA	NA	NA	NA	NA
VDZ93063.1|1832347_1834885_+	hyaluronate lyase	NA	NA	NA	NA	NA
VDZ93064.1|1835008_1835386_-	exported protein	NA	NA	NA	NA	NA
VDZ93065.1|1835591_1836032_-	putative protein with DUF1433	NA	NA	NA	NA	NA
VDZ93066.1|1836076_1837690_+	pathogenicity island protein	NA	NA	NA	NA	NA
VDZ93067.1|1837704_1838004_+	ESAT-6 family protein	NA	NA	NA	NA	NA
VDZ93068.1|1838130_1839375_-	restriction-modification system, S subunit	NA	A0A2H4PQP5	Staphylococcus_phage	62.1	1.2e-125
VDZ93069.1|1839367_1840924_-	Type I restriction enzyme EcoprrI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	2.0e-287
VDZ93070.1|1841286_1842006_-|protease	Serine protease splD	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
VDZ93071.1|1842156_1842873_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	99.2	2.4e-131
VDZ93072.1|1843030_1843750_-|protease	Serine protease splD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	5.1e-129
VDZ93073.1|1843870_1844590_-|protease	Serine protease splC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
VDZ93074.1|1844647_1845370_-|protease	Serine protease splB	protease	A0A2H4PQN0	Staphylococcus_phage	100.0	6.4e-132
VDZ93075.1|1845494_1846202_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	99.6	7.7e-130
VDZ93076.1|1847164_1847734_+	beta-lactamase	NA	A0A2H4PQH6	Staphylococcus_phage	62.6	2.6e-51
VDZ93077.1|1848207_1848480_-	truncated BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	78.8	2.9e-29
VDZ93078.1|1848681_1849155_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ93079.1|1849159_1849951_+	Domain of uncharacterised function DUF1828	NA	NA	NA	NA	NA
VDZ93080.1|1850320_1851304_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
VDZ93081.1|1851305_1852241_-	Leukocidin S subunit lukE	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 9
LR134139	Staphylococcus aureus strain NCTC4163 genome assembly, chromosome: 1	2759837	1940000	2030478	2759837	head,tail,terminase,tRNA,portal,holin,protease,capsid	Staphylococcus_phage(90.91%)	107	NA	NA
VDZ93157.1|1940000_1941428_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
VDZ93158.1|1941440_1942898_-|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
VDZ93159.1|1942899_1943202_-|tRNA	Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
VDZ93160.1|1943568_1945107_+	Sodium/proline symporter	NA	NA	NA	NA	NA
VDZ93161.1|1945195_1946395_-	Lipoprotein (pheromone precursor)	NA	NA	NA	NA	NA
VDZ93162.1|1946407_1948411_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
VDZ93163.1|1948414_1950607_-	ATP-dependent DNA helicase UvrD/PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
VDZ93164.1|1950603_1951296_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
VDZ93165.1|1951467_1951770_-	His repressor	NA	NA	NA	NA	NA
VDZ93166.1|1951878_1953174_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
VDZ93167.1|1954033_1955200_+	Staphopain A precursor	NA	NA	NA	NA	NA
VDZ93168.1|1955230_1955557_+|protease	putative cysteine protease inhibitor (Staphostatin A)	protease	NA	NA	NA	NA
VDZ93169.1|1955848_1956022_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ93170.1|1956002_1956605_-	Uncharacterized protein conserved in bacteria (DUF2179)	NA	NA	NA	NA	NA
VDZ93171.1|1956875_1957697_-	NH(3)-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
VDZ93172.1|1957689_1959159_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
VDZ93173.1|1959342_1960419_+	nitric-oxide synthase	NA	NA	NA	NA	NA
VDZ93174.1|1960438_1961233_+	ACT domain protein	NA	NA	NA	NA	NA
VDZ93175.1|1961422_1962985_-	sodium-dependent dicarboxylate transporter sdcS	NA	NA	NA	NA	NA
VDZ93176.1|1963189_1964287_-	cell wall surface anchor family protein	NA	U5PWM6	Bacillus_phage	34.9	2.5e-47
VDZ93177.1|1964658_1965219_+	Nicotinamidase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
VDZ93178.1|1965271_1966201_+	inorganic pyrophosphatase	NA	NA	NA	NA	NA
VDZ93179.1|1966620_1968000_+	Aldehyde dehydrogenase	NA	NA	NA	NA	NA
VDZ93180.1|1968119_1969148_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
VDZ93181.1|1969417_1969819_+	yolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
VDZ93182.1|1970391_1970565_-	exported protein	NA	NA	NA	NA	NA
VDZ93183.1|1970943_1972056_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
VDZ93184.1|1972112_1972955_-	exported protein	NA	NA	NA	NA	NA
VDZ93185.1|1972951_1973509_-	Predicted membrane protein	NA	NA	NA	NA	NA
VDZ93186.1|1973568_1974093_-	membrane protein	NA	NA	NA	NA	NA
VDZ93187.1|1974213_1974777_+	Thioredoxin	NA	NA	NA	NA	NA
VDZ93188.1|1974842_1975583_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
VDZ93189.1|1975582_1976455_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
VDZ93190.1|1976451_1977132_-	membrane protein	NA	NA	NA	NA	NA
VDZ93191.1|1977132_1978029_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
VDZ93192.1|1978025_1978406_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
VDZ93193.1|1978664_1978841_-	membrane protein	NA	NA	NA	NA	NA
VDZ93194.1|1979381_1980668_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
VDZ93195.1|1980946_1981237_-	truncated map-w protein; extracellular adherence protein of broad specificity Eap/Map	NA	NA	NA	NA	NA
VDZ93196.1|1981247_1983311_-	MHC class II analog (pseudogene)	NA	NA	NA	NA	NA
VDZ93197.1|1983696_1983897_+	beta-hemolysin	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
VDZ93198.1|1985071_1985422_-	Involved in expression of fibrinogen binding protein, phage associated	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
VDZ93199.1|1985931_1986228_-	amidase	NA	R9QTN8	Staphylococcus_phage	99.0	3.0e-51
VDZ93200.1|1986918_1987410_-	Staphylokinase	NA	A7TWR8	Staphylococcus_phage	100.0	8.0e-86
VDZ93201.1|1987600_1988356_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
VDZ93202.1|1988367_1988622_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
VDZ93203.1|1989152_1989527_-	phage protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
VDZ93204.1|1989582_1989870_-	phi PVL ORF 22-like protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
VDZ93205.1|1989915_1990068_-	phage protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
VDZ93206.1|1990060_1993843_-	phage minor structural, N-terminal region domain protein	NA	R9QT86	Staphylococcus_phage	100.0	0.0e+00
VDZ93207.1|1993858_1995349_-|tail	phage tail family protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
VDZ93208.1|1995348_1999998_-|tail	phage tail tape measure protein, TP901 family, core region	tail	R9QSQ8	Staphylococcus_phage	100.0	0.0e+00
VDZ93209.1|2000235_2000682_-	Bacteriophage	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
VDZ93210.1|2000746_2001700_-|tail	phage major tail, phi13 family protein	tail	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
VDZ93211.1|2001700_2002081_-	phi PVL orf 12-like protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
VDZ93212.1|2002077_2002455_-	gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
VDZ93213.1|2002454_2002790_-|head,tail	phage head-tail adaptor	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
VDZ93214.1|2002776_2003109_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
VDZ93215.1|2003117_2003276_-	Bacteriophage	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
VDZ93216.1|2003311_2004559_-|capsid	phage major capsid protein, HK97 family	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
VDZ93217.1|2004646_2005231_-|head,protease	prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
VDZ93218.1|2005223_2006474_-|portal	portal protein	portal	R9QSV8	Staphylococcus_phage	100.0	1.7e-236
VDZ93219.1|2006479_2006719_-	phi PVL orf 3-like protein	NA	R9QT78	Staphylococcus_phage	100.0	5.3e-35
VDZ93220.1|2006693_2008388_-	phage Terminase family protein	NA	A0A1V0E5G5	Staphylococcus_phage	100.0	0.0e+00
VDZ93221.1|2008390_2008858_-|terminase	phage terminase small subunit	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
VDZ93222.1|2008987_2009341_-	phage endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	1.3e-66
VDZ93223.1|2009347_2009800_-	hypothetical phage-related protein	NA	R9QTP3	Staphylococcus_phage	100.0	1.8e-79
VDZ93224.1|2009914_2010376_-	Phage protein	NA	R9QT84	Staphylococcus_phage	100.0	8.7e-74
VDZ93225.1|2010398_2010602_-	phage protein	NA	R9QT57	Staphylococcus_phage	100.0	6.3e-29
VDZ93226.1|2010598_2011249_-	Uncharacterised protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
VDZ93227.1|2011255_2011408_-	Uncharacterised protein	NA	A0A2I6PDV2	Staphylococcus_phage	100.0	5.4e-17
VDZ93228.1|2011407_2011557_-	transcriptional activator RinB	NA	R9QSU6	Staphylococcus_phage	100.0	1.8e-17
VDZ93229.1|2011553_2011760_-	phage protein	NA	S4V684	Staphylococcus_phage	100.0	7.6e-30
VDZ93230.1|2011796_2012333_-	dUTPase family protein	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
VDZ93231.1|2012325_2012574_-	Phage protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
VDZ93232.1|2012566_2012851_-	phage protein	NA	E9LT36	Staphylococcus_phage	100.0	2.7e-46
VDZ93233.1|2012847_2013297_-	YopX-family protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
VDZ93234.1|2013293_2013488_-	phage protein	NA	A0A2I6PE33	Staphylococcus_phage	100.0	2.5e-27
VDZ93235.1|2013484_2013871_-	phage protein	NA	I1W655	Staphylococcus_phage	100.0	4.1e-69
VDZ93236.1|2013884_2014127_-	phage family protein	NA	R9QT89	Staphylococcus_phage	100.0	3.0e-41
VDZ93237.1|2014130_2014499_-	Phage protein	NA	A0A0E3XD52	Staphylococcus_phage	100.0	6.7e-53
VDZ93238.1|2014511_2014916_-	phage protein	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
VDZ93239.1|2014924_2015143_-	phage protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
VDZ93240.1|2015149_2016043_-	Phage protein	NA	A0A0E3TAG7	Staphylococcus_phage	100.0	1.1e-141
VDZ93241.1|2016072_2016543_-	Single-stranded DNA-binding protein, phage associated	NA	A0A0E3T9H6	Staphylococcus_phage	100.0	5.7e-81
VDZ93242.1|2016543_2017029_-	Metallo-beta-lactamase superfamily domain protein in prophage	NA	S4SWA4	Staphylococcus_phage	100.0	9.4e-87
VDZ93243.1|2017241_2018162_-	recombinase, phage RecT family protein	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
VDZ93244.1|2018163_2020113_-	Uncharacterized conserved protein	NA	R9QT82	Staphylococcus_phage	100.0	0.0e+00
VDZ93245.1|2020115_2020379_-	phage protein	NA	R9QT48	Staphylococcus_phage	100.0	7.7e-43
VDZ93246.1|2020387_2020648_-	putative phi PVL-like protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
VDZ93247.1|2020740_2020902_-	phage protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
VDZ93248.1|2020898_2021219_-	Uncharacterized protein conserved in bacteria	NA	R9QT52	Staphylococcus_phage	100.0	1.5e-56
VDZ93249.1|2021277_2021505_+	Uncharacterised protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
VDZ93250.1|2021506_2021698_-	Uncharacterised protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
VDZ93251.1|2021747_2022104_+	Phage protein	NA	A0A1P8L6H1	Staphylococcus_phage	100.0	6.1e-59
VDZ93252.1|2022098_2022293_-	phage protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
VDZ93253.1|2022308_2023097_-	prophage L54a, antirepressor	NA	R9QSV3	Staphylococcus_phage	100.0	1.2e-144
VDZ93254.1|2023112_2023355_-	phage DNA-binding protein	NA	R9QSU1	Staphylococcus_phage	100.0	9.5e-40
VDZ93255.1|2023518_2024235_+	repressor-like protein	NA	R9QTP6	Staphylococcus_phage	100.0	9.2e-131
VDZ93256.1|2024246_2025104_+	HIRAN domain-containing protein	NA	R9QTP0	Staphylococcus_phage	100.0	1.2e-161
VDZ93257.1|2025148_2025331_+	Putative cytosolic protein	NA	R9QT81	Staphylococcus_phage	100.0	5.3e-27
VDZ93258.1|2025387_2025513_+	ORF136	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
VDZ93259.1|2025509_2026124_-	phi PVL ORF 30-like protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
VDZ93260.1|2026231_2027269_+	DNA integration/recombination/inversion protein	NA	A7TWL3	Staphylococcus_phage	100.0	3.4e-179
VDZ93261.1|2027325_2028150_+	phospholipase C	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
VDZ93262.1|2028387_2029404_-	gamma-hemolysin component B	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
VDZ93263.1|2029425_2030478_-	Leukocidin S subunit	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	2.5e-36
