assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635345.1_41686_B01	LR134094	Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669 genome assembly, chromosome: 1	1	1253217-1254638	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csa3,csn2,cas2,cas1,cas9	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type II-C,Type II-A,Type II-B	GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	21,21,19	21	TypeII-C,TypeII-A,TypeII-B	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|164aa|up_9|LR134094.1_1243701_1244193_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_8|LR134094.1_1244211_1244637_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_7|LR134094.1_1244843_1245863_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|390aa|up_6|LR134094.1_1245972_1247142_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|99aa|up_5|LR134094.1_1247331_1247628_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|217aa|up_4|LR134094.1_1247864_1248515_-	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|146aa|up_3|LR134094.1_1248527_1248965_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|611aa|up_2|LR134094.1_1249138_1250971_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|420aa|up_1|LR134094.1_1251216_1252476_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|153aa|up_0|LR134094.1_1252639_1253098_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|260aa|down_0|LR134094.1_1254667_1255447_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|97aa|down_1|LR134094.1_1255482_1255773_-	pfam01527, HTH_Tnp_1, Transposase	csn2|221aa|down_2|LR134094.1_1255961_1256624_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|104aa|down_3|LR134094.1_1256613_1256925_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_4|LR134094.1_1256951_1257821_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1365aa|down_5|LR134094.1_1257820_1261915_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|211aa|down_6|LR134094.1_1262389_1263022_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_7|LR134094.1_1263021_1263786_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_8|LR134094.1_1263785_1264538_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_9|LR134094.1_1264548_1265679_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase
GCA_900635345.1_41686_B01	LR134094	Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669 genome assembly, chromosome: 1	2	1542050-1542949	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type I-U, Type I-U?,Type I-C	ATTTCAATCCACTCACCCGTGAAGGGTGAGAC,ATTTCAATCCACTCACCCGTGAAGGGTGAGAC,ATTTCAATCCACTCACCCGTGAAGGGTGAGAC	32,32,32	1	1	1542885-1542917	LR134094.1_687421-687389	I-C:I-C:I-C	13,13,12	13	TypeI-U,TypeI-U?,TypeI-C	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|158aa|up_9|LR134094.1_1532129_1532603_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_8|LR134094.1_1532780_1533497_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_7|LR134094.1_1533519_1534599_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_6|LR134094.1_1534671_1536405_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_5|LR134094.1_1536401_1537142_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_4|LR134094.1_1537229_1538336_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_3|LR134094.1_1538375_1538999_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_2|LR134094.1_1539011_1539722_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|311aa|up_1|LR134094.1_1539941_1540874_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|320aa|up_0|LR134094.1_1540965_1541925_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas2|98aa|down_0|LR134094.1_1543097_1543391_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|LR134094.1_1543401_1544427_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|224aa|down_2|LR134094.1_1544423_1545095_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|LR134094.1_1545096_1545945_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|632aa|down_4|LR134094.1_1545949_1547845_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas5|303aa|down_5|LR134094.1_1547844_1548753_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|779aa|down_6|LR134094.1_1548703_1551040_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|884aa|down_7|LR134094.1_1551395_1554047_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|303aa|down_8|LR134094.1_1554066_1554975_-	COG3586, COG3586, Uncharacterized conserved protein [Function unknown]	NA|188aa|down_9|LR134094.1_1554976_1555540_-	pfam13238, AAA_18, AAA domain
GCA_900635345.1_41686_B01	LR134094	Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669 genome assembly, chromosome: 1	3	1798410-1798485	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Orphan	GGGCTAAAAATGTTCACTGAACGT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|167aa|up_9|LR134094.1_1789486_1789987_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|411aa|up_8|LR134094.1_1789988_1791221_-	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II	NA|245aa|up_7|LR134094.1_1791235_1791970_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|307aa|up_6|LR134094.1_1791981_1792902_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|324aa|up_5|LR134094.1_1792926_1793898_-	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II	NA|75aa|up_4|LR134094.1_1794096_1794321_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|325aa|up_3|LR134094.1_1794381_1795356_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|145aa|up_2|LR134094.1_1795356_1795791_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|264aa|up_1|LR134094.1_1795867_1796659_-	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional	NA|390aa|up_0|LR134094.1_1796879_1798049_-	PRK14276, PRK14276, chaperone protein DnaJ; Provisional	NA|609aa|down_0|LR134094.1_1798487_1800314_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|181aa|down_1|LR134094.1_1800420_1800963_-	PRK14156, PRK14156, heat shock protein GrpE; Provisional	NA|354aa|down_2|LR134094.1_1801004_1802066_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|190aa|down_3|LR134094.1_1802173_1802743_-	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|248aa|down_4|LR134094.1_1802739_1803483_-	COG1876, VanY, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|236aa|down_5|LR134094.1_1803472_1804180_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|79aa|down_6|LR134094.1_1804481_1804718_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|314aa|down_7|LR134094.1_1804788_1805730_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|480aa|down_8|LR134094.1_1805952_1807392_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|489aa|down_9|LR134094.1_1807391_1808858_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
