bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	4.1|850907|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	92.31	26	2	0	1	26	287112	287087	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	287087-287112	CGGGCCCCCAACATAGAAGCTGGCGG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	4.1|850907|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	92.31	26	2	0	1	26	812593	812568	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	812568-812593	CGGGGCCCCAACATAGAAGCAGGCGG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	4.1|850907|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	92.31	26	2	0	1	26	964874	964849	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	964849-964874	CGGGGCCCCAACACAGAGGCTGGTGG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	5.1|900740|34|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	100.00	34	0	0	1	34	1396098	1396065	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1396065-1396098	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	5.1|900740|34|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	100.00	34	0	0	1	34	1487914	1487947	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1487914-1487947	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	7.1|1185470|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	96.15	26	1	0	1	26	287087	287112	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	287087-287112	CGGGCCCCCAACATAGAAGCTGGCGG	1
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	7.1|1185470|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	96.15	26	1	0	1	26	812568	812593	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	812568-812593	CGGGGCCCCAACATAGAAGCAGGCGG	1
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	7.1|1185470|26|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	92.31	26	2	0	1	26	812624	812649	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	812624-812649	CGGGGCCCCAACATAAAAGCAGGCGG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	850943	850975	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	850943-850975	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1185459	1185427	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1185427-1185459	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1396052	1396020	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1396020-1396052	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1487960	1487992	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1487960-1487992	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2036852	2036884	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2036852-2036884	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.1|2425843|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2701243	2701275	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2701243-2701275	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.2|2425899|36|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	100.00	36	0	0	1	36	1185406	1185371	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1185371-1185406	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.2|2425899|36|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	97.22	36	1	0	1	36	1854373	1854338	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1854338-1854373	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.2|2425899|36|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	94.44	36	2	0	1	36	287247	287212	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	287212-287247	TAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCA	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.2|2425899|36|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	94.44	36	2	0	1	36	1667019	1667054	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1667019-1667054	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.2|2425899|36|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	94.44	36	2	0	1	36	2047596	2047631	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2047596-2047631	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.3|2425958|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	850943	850975	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	850943-850975	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.3|2425958|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1185459	1185427	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1185427-1185459	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.3|2425958|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1396052	1396020	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1396020-1396052	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.3|2425958|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2036852	2036884	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2036852-2036884	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	10.3|2425958|33|LR027876|CRT	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2701243	2701275	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2701243-2701275	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	11.1|2923755|32|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	96.88	32	1	0	1	32	851043	851074	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	3e-08	49.1	1.0	ACACCCTAACTCGCATTGCCTGTAGAATTTCT	851043-851074	ACACCCCAACTCGCATTGCCTGTAGAATTTCT	1
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	11.1|2923755|32|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	96.88	32	1	0	1	32	1111113	1111144	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	3e-08	49.1	1.0	ACACCCTAACTCGCATTGCCTGTAGAATTTCT	1111113-1111144	ACACCCCAACTCGCATTGCCTGTAGAATTTCT	1
LR027876	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	11.1|2923755|32|LR027876|CRISPRCasFinder	LR027876.1	Staphylococcus aureus strain JKD6009 genome assembly, chromosome: 1	96.88	32	1	0	1	32	1488004	1488035	419539-419639|687252-687344|802997-803079|850877-850962|900716-900797|1101153-1101240|1185440-1185525|1959270-1959397|2300337-2300487|2425820-2426013|2923729-2923812	3e-08	49.1	1.0	ACACCCTAACTCGCATTGCCTGTAGAATTTCT	1488004-1488035	ACACCCCAACTCGCATTGCCTGTAGAATTTCT	1
