The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483497	Pseudomonas aeruginosa strain NCTC9433 genome assembly, chromosome: 1	6440688	361376	369152	6440688		Hokovirus(14.29%)	9	NA	NA
SQK84672.1|361376_362261_+	phosphoenolpyruvate-protein phosphotransferase PtsP	NA	A0A1V0SGR7	Hokovirus	27.7	6.4e-17
SQK84674.1|362379_363417_+	putative sensory box protein	NA	A0A127AWB9	Bacillus_phage	29.8	4.1e-15
SQK84676.1|363421_364177_-	Uncharacterized conserved protein	NA	A0A0M3ZEJ9	Turkeypox_virus	27.9	1.9e-22
SQK84677.1|364298_365102_+	permease	NA	NA	NA	NA	NA
SQK84679.1|365111_365912_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
SQK84680.1|366120_366504_+	thymidylate synthase	NA	E5DV96	Deep-sea_thermophilic_phage	66.7	3.4e-47
SQK84682.1|366539_366914_+	thymidylate synthase	NA	A0A2R4A1R4	Microbacterium_phage	66.1	6.8e-45
SQK84683.1|366940_367738_-	methyltransferase	NA	F2Y1T8	Organic_Lake_phycodnavirus	33.3	4.9e-08
SQK84685.1|367772_369152_-	GTPase SAR1	NA	A0A0R6PIV9	Moraxella_phage	40.1	2.1e-62
>prophage 2
LS483497	Pseudomonas aeruginosa strain NCTC9433 genome assembly, chromosome: 1	6440688	612697	702272	6440688	integrase,plate,holin,tail,tRNA	Pseudomonas_phage(27.91%)	97	606202:606224	612959:612981
606202:606224	attL	AAGCCGCGCAATGCGCGGCTTTG	NA	NA	NA	NA
SQK85248.1|612697_612859_-|integrase	phage integrase family site specific recombinase	integrase	NA	NA	NA	NA
SQK85249.1|613080_616818_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.4	4.8e-13
612959:612981	attR	CAAAGCCGCGCATTGCGCGGCTT	NA	NA	NA	NA
SQK85250.1|616924_618241_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.8	8.3e-37
SQK85251.1|618332_618779_-	RNA polymerase sigma factor RpoD	NA	NA	NA	NA	NA
SQK85253.1|618857_620042_-	DNA primase	NA	NA	NA	NA	NA
SQK85254.1|620933_621383_-|tRNA	aspartyl-tRNA amidotransferase subunit B	tRNA	A0A292GL36	Xanthomonas_phage	38.8	5.0e-18
SQK85255.1|621452_621668_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
SQK85256.1|621867_622893_+	UGMP family protein	NA	A0A0R6PI74	Moraxella_phage	58.1	3.7e-109
SQK85260.1|622971_623541_-	glycerol-3-phosphate acyltransferase PlsY	NA	NA	NA	NA	NA
SQK85262.1|623623_623977_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
SQK85264.1|623967_624510_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase	NA	NA	NA	NA	NA
SQK85266.1|624482_625715_-|tRNA	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	tRNA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
SQK85268.1|625758_626265_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85271.1|626359_627913_-	SpoVR family protein	NA	NA	NA	NA	NA
SQK85273.1|627909_629181_-	Uncharacterized conserved protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
SQK85275.1|629281_631204_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
SQK85279.1|631482_631815_-	thiosulfate sulfurtransferase	NA	NA	NA	NA	NA
SQK85280.1|631858_631951_-	diadenosine tetraphosphatase	NA	NA	NA	NA	NA
SQK85284.1|631947_632709_-	diadenosine tetraphosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	33.3	9.4e-09
SQK85288.1|632708_633089_-	CO2+/MG2+ efflux protein ApaG	NA	NA	NA	NA	NA
SQK85292.1|633125_633932_-	16S ribosomal RNA methyltransferase KsgA/Dim1 family protein	NA	NA	NA	NA	NA
SQK85295.1|634047_634812_-	4-hydroxythreonine-4-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQK85299.1|635029_636322_-	peptidyl-prolyl cis-trans isomerase SurA	NA	NA	NA	NA	NA
SQK85303.1|636302_637433_-	organic solvent tolerance protein	NA	NA	NA	NA	NA
SQK85307.1|637503_639075_-	organic solvent tolerance protein	NA	NA	NA	NA	NA
SQK85310.1|639201_640218_+	phosphotransferase	NA	NA	NA	NA	NA
SQK85313.1|640214_640889_+	nucleotidyl transferase	NA	NA	NA	NA	NA
SQK85317.1|640890_641649_+	molecuar chaperone DnaJ	NA	NA	NA	NA	NA
SQK85320.1|641649_642711_-	hydrolase	NA	NA	NA	NA	NA
SQK85324.1|642862_645256_+	sensory box histidine kinase	NA	NA	NA	NA	NA
SQK85327.1|645301_645934_+	putative two-component response regulator	NA	NA	NA	NA	NA
SQK85329.1|646062_647097_+	putative binding protein component of ABC transporter	NA	NA	NA	NA	NA
SQK85333.1|647329_648439_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.4	7.8e-28
SQK85336.1|648494_649541_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQK85342.1|649656_650904_+	ABC transporter permease	NA	NA	NA	NA	NA
SQK85345.1|651009_651840_+	ABC transporter permease	NA	NA	NA	NA	NA
SQK85347.1|651963_652638_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
SQK85351.1|652637_653456_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
SQK85355.1|653730_655008_+	anthranilate synthase component I	NA	NA	NA	NA	NA
SQK85358.1|655193_655508_-	transcriptional regulator PrtN	NA	NA	NA	NA	NA
SQK85360.1|655607_656378_-	transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
SQK85361.1|656495_656633_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85364.1|656835_657036_+	repressor, PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
SQK85366.1|657083_657443_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85369.1|657901_658255_+|holin	putative holin	holin	B5TK61	Pseudomonas_phage	53.3	3.9e-26
SQK85372.1|658276_658792_+	phage protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	42.9	3.1e-32
SQK85376.1|658788_659346_+|plate	putative baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	71.1	4.6e-45
SQK85379.1|659507_659825_+	putative bacteriophage protein	NA	A0A2H4JA09	uncultured_Caudovirales_phage	59.0	4.5e-29
SQK85383.1|659821_660709_+|plate	putative phage baseplate assembly protein	plate	S4TNY7	Salmonella_phage	59.8	5.3e-88
SQK85385.1|660701_661235_+	putative bacteriophage protein	NA	Q9ZXK7	Pseudomonas_virus	64.0	6.7e-62
SQK85391.1|661236_663354_+	putative bacteriophage protein	NA	Q9ZXK6	Pseudomonas_virus	52.4	9.4e-224
SQK85394.1|663439_663802_+|tail	tail fiber assembly protein	tail	NA	NA	NA	NA
SQK85397.1|663844_665005_+|tail	phage tail sheath protein	tail	Q38068	Phage_PS17	83.4	1.6e-188
SQK85400.1|665017_665521_+|tail	putative phage tail tube protein	tail	Q7M2A5	Pseudomonas_phage	73.5	8.0e-65
SQK85402.1|665535_665880_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85404.1|666049_668287_+|tail	putative tail length determinator protein	tail	NA	NA	NA	NA
SQK85408.1|668296_669169_+|tail	putative tail formation protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	51.7	1.8e-75
SQK85411.1|669143_669350_+	putative phage protein X	NA	A0A2H4J9Z9	uncultured_Caudovirales_phage	64.2	2.3e-18
SQK85413.1|669407_670031_+	phage late control gene D protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	60.7	7.1e-63
SQK85416.1|670030_670396_+	phage late control gene D protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	53.8	4.2e-31
SQK85420.1|670428_671058_+	lytic enzyme	NA	A0A125RNP1	Pseudomonas_phage	78.5	2.9e-88
SQK85423.1|671054_671417_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85425.1|671413_671671_+	lipoprotein	NA	A0A125RNP3	Pseudomonas_phage	64.6	8.3e-18
SQK85427.1|671986_672481_+|tail	major tail subunit	tail	A0A286S1Q8	Klebsiella_phage	56.5	1.4e-45
SQK85428.1|672492_672741_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85430.1|672801_673122_+	phage protein	NA	A0A1J0GUY0	Halomonas_phage	40.2	7.7e-13
SQK85431.1|673168_674734_+|tail	phage tail length tape measure protein	tail	A0A2H4J7J3	uncultured_Caudovirales_phage	48.9	1.7e-12
SQK85432.1|674709_675006_+|tail	phage tail length tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	38.8	6.7e-11
SQK85434.1|674998_675340_+|tail	prophage LambdaSo, minor tail protein M	tail	Q6UAW6	Klebsiella_phage	40.0	1.4e-17
SQK85435.1|675391_676042_+|tail	minor tail protein L	tail	A0A1B0VNE0	Pseudomonas_phage	49.6	1.8e-64
SQK85437.1|676044_676815_+	peptidase P60	NA	A0A2D1GNP8	Pseudomonas_phage	55.6	5.5e-81
SQK85438.1|676869_677472_+	bacteriophage protein	NA	A0A1V0E8A0	Vibrio_phage	57.8	2.2e-53
SQK85439.1|677530_681193_+	bacteriophage protein	NA	A0A0S2SYC5	Pseudomonas_phage	59.9	0.0e+00
SQK85440.1|681189_681474_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85442.1|681470_682136_+	Uncharacterised protein	NA	A0A0S2SYG5	Pseudomonas_phage	44.4	4.5e-55
SQK85443.1|682154_683255_+|tail	tail fiber protein	tail	A0A1W6JTA8	Pseudomonas_phage	77.6	2.0e-116
SQK85444.1|683562_683790_+	Uncharacterised protein	NA	A0A0A0YQ17	Pseudomonas_phage	89.0	5.4e-29
SQK85446.1|684193_684799_+	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	66.3	4.6e-75
SQK85451.1|684800_685850_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
SQK85453.1|685846_686626_+	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	58.1	3.2e-68
SQK85455.1|686743_687388_-	DNA-binding transcriptional dual regulator Crp	NA	NA	NA	NA	NA
SQK85457.1|687659_688082_+	redox protein	NA	NA	NA	NA	NA
SQK85459.1|688401_689196_+	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA	NA
SQK85461.1|689250_689898_-	ubiquinone biosynthesis protein	NA	NA	NA	NA	NA
SQK85462.1|689997_690336_-	HIT family protein	NA	NA	NA	NA	NA
SQK85463.1|690414_691896_+	putative ATPase	NA	U5XJW0	Phormidium_phage	33.5	6.7e-67
SQK85464.1|691935_692736_-	putative short chain alcohol dehydrogenase	NA	NA	NA	NA	NA
SQK85469.1|692796_693873_-	membrane protein	NA	NA	NA	NA	NA
SQK85470.1|693994_694963_-	2-nitropropane dioxygenase	NA	NA	NA	NA	NA
SQK85471.1|694979_695402_-	membrane protein	NA	NA	NA	NA	NA
SQK85473.1|695692_696727_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
SQK85475.1|696726_697446_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQK85477.1|697455_697869_+	putative integral membrane protein	NA	NA	NA	NA	NA
SQK85479.1|697946_698297_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	53.2	3.0e-26
SQK85484.1|698350_699442_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
SQK85485.1|699444_700884_-	putative metallopeptidase	NA	O03937	Lactobacillus_phage	44.1	3.3e-18
SQK85490.1|701072_702272_+|tRNA	tyrosyl-tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 3
LS483497	Pseudomonas aeruginosa strain NCTC9433 genome assembly, chromosome: 1	6440688	1443215	1452277	6440688		Bacillus_phage(33.33%)	8	NA	NA
SQK87021.1|1443215_1443884_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.7	1.4e-43
SQK87022.1|1443929_1444823_+	putative lipoprotein NlpD	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.0e-06
SQK87023.1|1444927_1445932_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.3	7.0e-36
SQK87024.1|1446358_1446682_-	ferredoxin I	NA	NA	NA	NA	NA
SQK87025.1|1446748_1449316_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.1	2.4e-24
SQK87026.1|1449441_1450449_-	putative TolB-like translocation protein	NA	NA	NA	NA	NA
SQK87027.1|1450596_1451103_+	competence-damaged protein	NA	B5TK85	Pseudomonas_phage	76.0	8.1e-57
SQK87028.1|1451236_1452277_+	recombinase A	NA	A0A0S2MVG1	Bacillus_phage	59.5	1.5e-113
>prophage 4
LS483497	Pseudomonas aeruginosa strain NCTC9433 genome assembly, chromosome: 1	6440688	2566684	2592817	6440688	tRNA,protease,transposase	uncultured_Caudovirales_phage(33.33%)	27	NA	NA
SQK95847.1|2566684_2567812_-|tRNA	tRNA-specific 2-thiouridylase MnmA	tRNA	NA	NA	NA	NA
SQK95851.1|2567855_2568326_-	putative NUDIX hydrolase	NA	NA	NA	NA	NA
SQK95853.1|2568412_2570638_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
SQK95855.1|2570996_2572253_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	81.5	3.1e-17
SQK95857.1|2572326_2572599_-	cold-shock protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.8	1.1e-15
SQK95858.1|2572824_2573193_+|protease	ATP-dependent Clp protease adaptor protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	41.6	4.9e-11
SQK95859.1|2573220_2575497_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.8	3.4e-163
SQK95860.1|2575578_2575797_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
SQK95862.1|2575901_2576609_-|tRNA	arginyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
SQK95863.1|2576663_2577344_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
SQK95864.1|2577381_2578332_-	thioredoxin reductase 1	NA	A0A2I2L5E1	Orpheovirus	43.0	9.2e-62
SQK95866.1|2578559_2580995_+	cell division protein FtsK	NA	G1D482	Mycobacterium_virus	52.8	1.9e-87
SQK95869.1|2581020_2581647_+	lipoprotein chaperone	NA	NA	NA	NA	NA
SQK95870.1|2581656_2582982_+	recombination factor protein RarA	NA	G3MBE0	Bacillus_virus	39.2	7.2e-81
SQK95872.1|2583103_2584384_+|tRNA	seryl-tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	8.2e-98
SQK95874.1|2584385_2585783_+	siroheme synthase	NA	NA	NA	NA	NA
SQK95876.1|2585787_2586762_-	glutathione S-transferase domain-containing protein	NA	NA	NA	NA	NA
SQK95879.1|2586849_2587833_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.6	3.2e-142
SQK95880.1|2587829_2588165_-	putative desulfoviridin gamma subunit	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	3.3e-38
SQK95882.1|2588161_2588467_-	DsrH family protein	NA	NA	NA	NA	NA
SQK95883.1|2588466_2588826_-	sulfur relay protein TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	1.4e-34
SQK95885.1|2588822_2589218_-	sulfur transfer complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	2.7e-47
SQK95887.1|2589327_2590119_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	44.4	1.2e-17
SQK95888.1|2590148_2590547_-|transposase	ISPsy11, transposase OrfA	transposase	NA	NA	NA	NA
SQK95890.1|2590654_2591323_-	24K membrane protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	81.6	1.9e-90
SQK95891.1|2591597_2592389_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	44.4	1.2e-17
SQK95893.1|2592418_2592817_-|transposase	ISPsy11, transposase OrfA	transposase	NA	NA	NA	NA
>prophage 5
LS483497	Pseudomonas aeruginosa strain NCTC9433 genome assembly, chromosome: 1	6440688	5144314	5151708	6440688		Pseudomonas_phage(37.5%)	16	NA	NA
SQL00383.1|5144314_5145145_+	Uncharacterised protein	NA	A0A0S3UFQ2	Pseudomonas_phage	50.5	9.6e-39
SQL00387.1|5145141_5145828_+	Uncharacterised protein	NA	H2BD37	Pseudomonas_phage	58.8	7.7e-26
SQL00389.1|5145827_5146529_+	Protein of uncharacterised function (DUF2786)	NA	NA	NA	NA	NA
SQL00392.1|5146525_5147233_+	Uncharacterised protein	NA	I6T7L3	Staphylococcus_virus	33.3	5.3e-22
SQL00396.1|5147216_5147435_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQL00398.1|5147431_5147959_+	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	48.7	1.2e-23
SQL00400.1|5147955_5148207_+	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	55.7	4.2e-14
SQL00402.1|5148206_5148458_+	replicative DNA helicase	NA	NA	NA	NA	NA
SQL00404.1|5148475_5148775_+	replicative DNA helicase	NA	O80281	Escherichia_phage	70.5	3.4e-31
SQL00407.1|5148771_5148957_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQL00410.1|5148946_5149474_+	hyphothetical protein CP11	NA	NA	NA	NA	NA
SQL00413.1|5149470_5149728_+	hyphothetical protein CP12	NA	NA	NA	NA	NA
SQL00416.1|5150041_5150215_+	hyphothetical protein CP13	NA	NA	NA	NA	NA
SQL00418.1|5150207_5150441_+	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA	NA
SQL00421.1|5150440_5151457_+	nucleoid-associated protein NdpA	NA	L7TI92	Pseudomonas_virus	88.7	7.5e-171
SQL00424.1|5151459_5151708_+	DNA binding protein	NA	A0A0U4B0M9	Pseudomonas_phage	44.8	1.4e-06
