The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	1134582	1167408	4786558	transposase,integrase	Escherichia_phage(50.0%)	35	1153101:1153116	1174134:1174149
SQJ16989.1|1134582_1134882_-|transposase	IS3 transposase	transposase	NA	NA	NA	NA
SQJ17460.1|1135160_1135619_+	DNA/RNA helicase	NA	NA	NA	NA	NA
SQJ17541.1|1136357_1136837_+	DNA/RNA helicase	NA	NA	NA	NA	NA
SQJ17595.1|1136836_1137148_+	DNA/RNA helicase	NA	NA	NA	NA	NA
SQJ17644.1|1137144_1137396_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ17673.1|1137364_1137784_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ17678.1|1138725_1139118_+|transposase	putative transposase	transposase	NA	NA	NA	NA
SQJ17679.1|1139541_1140096_-|integrase	prophage integrase	integrase	A0A1B5FPC6	Escherichia_phage	90.9	1.5e-88
SQJ17680.1|1140635_1141958_+	putative inner membrane protein	NA	NA	NA	NA	NA
SQJ17681.1|1142217_1144059_-	putative inner membrane protein	NA	NA	NA	NA	NA
SQJ17686.1|1144257_1144581_-|integrase	Phage integrase	integrase	NA	NA	NA	NA
SQJ17689.1|1144624_1145134_-|integrase	Phage integrase	integrase	NA	NA	NA	NA
SQJ17690.1|1146068_1146251_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ17691.1|1146250_1147930_-	putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component	NA	NA	NA	NA	NA
SQJ17692.1|1148152_1149694_+	PTS system, glucose-specific IIB component	NA	NA	NA	NA	NA
SQJ17693.1|1149823_1150666_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
SQJ17694.1|1150662_1151229_+	6-phospho 3-hexuloisomerase	NA	NA	NA	NA	NA
SQJ17695.1|1151252_1151888_+	D-arabino-3-hexulose 6-phosphate formaldehyde lyase	NA	NA	NA	NA	NA
SQJ17696.1|1151961_1153113_-	hexulose 6 phosphate synthase	NA	NA	NA	NA	NA
1153101:1153116	attL	TAGGGAGGGACATAAT	NA	NA	NA	NA
SQJ17697.1|1153458_1154472_-	putative dehydrogenase	NA	NA	NA	NA	NA
SQJ17698.1|1154482_1155463_-	PTS system glucitol/sorbitol-specific IIB component and second of two IIC component	NA	NA	NA	NA	NA
SQJ17699.1|1155459_1155834_-	PTS system glucitol/sorbitol-specific IIA component	NA	NA	NA	NA	NA
SQJ17700.1|1155830_1156352_-	PTS system glucitol/sorbitol-specific IIC component	NA	NA	NA	NA	NA
SQJ17768.1|1156464_1156749_-	Ner-like regulatory protein	NA	A0A2I7S995	Vibrio_phage	64.7	5.4e-18
SQJ17770.1|1156843_1157113_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
SQJ17791.1|1157353_1158220_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ17950.1|1158216_1158573_-	ATPase	NA	NA	NA	NA	NA
SQJ17959.1|1158559_1158757_-	ATPase	NA	NA	NA	NA	NA
SQJ17960.1|1159262_1159502_-	ATPase	NA	NA	NA	NA	NA
SQJ17961.1|1160004_1162074_-	Phage DNA primase	NA	A0A1B0VP75	Pseudomonas_phage	35.1	1.7e-73
SQJ17962.1|1162109_1162325_-	Prophage CP4-57 regulatory protein (AlpA)	NA	NA	NA	NA	NA
SQJ17963.1|1162790_1163603_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ17964.1|1164124_1164799_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ17965.1|1165522_1166161_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ17977.1|1166343_1167408_-|integrase	prophage integrase (pseudogene)	integrase	A0A1B5FPC6	Escherichia_phage	62.5	1.6e-118
1174134:1174149	attR	TAGGGAGGGACATAAT	NA	NA	NA	NA
>prophage 2
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	1171922	1215170	4786558	integrase,tRNA	Escherichia_phage(40.0%)	42	1184606:1184620	1203169:1203183
SQJ17987.1|1171922_1172216_+|integrase	integrase	integrase	NA	NA	NA	NA
SQJ17988.1|1172248_1173127_+|integrase	integrase	integrase	NA	NA	NA	NA
SQJ17989.1|1173119_1173551_+|integrase	integrase	integrase	NA	NA	NA	NA
SQJ17990.1|1173591_1174431_+|integrase	integrase	integrase	NA	NA	NA	NA
SQJ17991.1|1174623_1175700_+	DNA-binding protein	NA	NA	NA	NA	NA
SQJ17992.1|1175716_1176304_+	DNA-binding protein	NA	NA	NA	NA	NA
SQJ17993.1|1176318_1176738_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18005.1|1176802_1176985_+	membrane protein	NA	NA	NA	NA	NA
SQJ18006.1|1177268_1177535_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18007.1|1177555_1177942_-	exported protein	NA	NA	NA	NA	NA
SQJ18008.1|1178552_1178762_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18009.1|1178767_1178923_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18010.1|1179004_1179595_-	relaxase	NA	NA	NA	NA	NA
SQJ18011.1|1179624_1179972_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18012.1|1179928_1180159_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18013.1|1180962_1181241_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18014.1|1181369_1181768_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18015.1|1181865_1182516_-	Predicted ATP-binding protein involved in virulence	NA	NA	NA	NA	NA
SQJ18016.1|1182499_1182970_-	Predicted ATP-binding protein involved in virulence	NA	NA	NA	NA	NA
SQJ18017.1|1182988_1183834_-	Site-specific DNA methylase	NA	A0A2H4J8Q1	uncultured_Caudovirales_phage	31.7	8.9e-08
SQJ18018.1|1183970_1184684_-	Uncharacterised protein	NA	NA	NA	NA	NA
1184606:1184620	attL	TTTTTTTATTTATCT	NA	NA	NA	NA
SQJ18019.1|1184724_1185057_-|integrase	phage integrase family protein	integrase	A0A1B5FPC6	Escherichia_phage	90.0	4.8e-50
SQJ18020.1|1185097_1185955_-|integrase	phage integrase family protein	integrase	A0A1B5FPC6	Escherichia_phage	88.8	4.3e-143
SQJ18021.1|1186555_1187746_-	Putative HlyD family secretion protein	NA	NA	NA	NA	NA
SQJ18022.1|1187726_1189907_-	type I secretion protein, ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
SQJ18023.1|1191377_1193906_-	large repetitive protein	NA	NA	NA	NA	NA
SQJ18024.1|1194109_1202464_-	large repetitive protein	NA	NA	NA	NA	NA
SQJ18025.1|1202555_1202846_-	Muscle M-line assembly protein unc-89 Uncoordinated protein 89	NA	NA	NA	NA	NA
SQJ18027.1|1203461_1203989_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	4.4e-29
1203169:1203183	attR	TTTTTTTATTTATCT	NA	NA	NA	NA
SQJ18029.1|1204133_1204571_+	Ribosome association toxin RatA	NA	NA	NA	NA	NA
SQJ18031.1|1204560_1204851_+	UPF0125 protein yfjF	NA	NA	NA	NA	NA
SQJ18033.1|1205016_1205355_-	small protein A	NA	NA	NA	NA	NA
SQJ18035.1|1205503_1207165_-	DNA repair protein	NA	NA	NA	NA	NA
SQJ18038.1|1207250_1208015_-	NAD kinase	NA	NA	NA	NA	NA
SQJ18040.1|1208060_1208843_+	heat shock protein GrpE	NA	NA	NA	NA	NA
SQJ18042.1|1208877_1209483_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ18044.1|1209603_1210845_-	Hemolysins-related protein containing CBS domains	NA	NA	NA	NA	NA
SQJ18046.1|1210909_1211605_-	cytochrome c-type biogenesis heme exporter protein C	NA	NA	NA	NA	NA
SQJ18048.1|1211867_1213229_+	signal recognition particle protein	NA	NA	NA	NA	NA
SQJ18049.1|1213542_1213791_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
SQJ18051.1|1213809_1214358_+	Ribosome maturation factor rimM	NA	NA	NA	NA	NA
SQJ18054.1|1214402_1215170_+|tRNA	tRNA(guanine-N1)methyltransferase	tRNA	NA	NA	NA	NA
>prophage 3
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	1633148	1646903	4786558	protease,head,tail,holin	Salmonella_phage(28.57%)	16	NA	NA
SQJ19709.1|1633148_1633940_+|tail	side tail fiber protein	tail	Q1MVL8	Enterobacteria_phage	31.6	1.7e-48
SQJ19796.1|1634811_1636113_+	E3 ubiquitin-protein ligase SspH2	NA	Q9MBL9	Phage_Gifsy-2	80.0	2.4e-28
SQJ19800.1|1636165_1636978_+	leucine-rich repeat protein	NA	NA	NA	NA	NA
SQJ19801.1|1636977_1637079_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ19802.1|1637068_1637299_+	DNA-binding protein	NA	Q8HA92	Salmonella_phage	100.0	5.0e-38
SQJ19803.1|1637306_1638296_+	putative cytoplasmic protein	NA	A0A1C9IHZ5	Salmonella_phage	97.3	6.0e-189
SQJ19804.1|1638313_1638679_+	phage antiterminator	NA	A5LH77	Enterobacteria_phage	81.7	7.4e-52
SQJ19805.1|1638707_1640039_-	NTPase	NA	R9TRQ8	Vibrio_phage	28.5	4.6e-19
SQJ19806.1|1640335_1640665_+|holin	holin	holin	Q8SBE1	Shigella_phage	94.6	3.9e-36
SQJ19807.1|1640678_1641197_+|head,protease	phage pro-head protease	head,protease	Q8SBH9	Shigella_phage	88.0	5.2e-75
SQJ19808.1|1641257_1642499_+	bacteriophage protein	NA	Q8HAB4	Salmonella_phage	95.3	1.0e-52
SQJ19809.1|1642501_1643029_+|tail	tail protein	tail	A0A1S6KZZ1	Salmonella_phage	31.3	3.1e-11
SQJ19810.1|1643406_1643850_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	43.9	1.4e-28
SQJ19811.1|1643903_1645139_-	acetylase	NA	A0A166XZF2	Gordonia_phage	28.5	9.3e-06
SQJ19914.1|1645311_1645734_-	acetylase	NA	A0A193GZ69	Enterobacter_phage	48.8	4.1e-22
SQJ20048.1|1646231_1646903_+	DNA polymerase V subunit	NA	Q1MVE7	Enterobacteria_phage	71.3	1.3e-49
>prophage 4
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	1718974	1728149	4786558	tRNA	Enterobacteria_phage(77.78%)	12	NA	NA
SQJ20362.1|1718974_1719922_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
SQJ20364.1|1719905_1720637_+	putative permease transmembrane component	NA	NA	NA	NA	NA
SQJ20366.1|1720617_1720725_-	membrane protein	NA	NA	NA	NA	NA
SQJ20368.1|1720784_1721021_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	88.2	2.8e-12
SQJ20370.1|1721088_1721517_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.1	1.9e-62
SQJ20371.1|1721740_1722424_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	89.7	9.5e-85
SQJ20373.1|1722428_1723427_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	9.7e-171
SQJ20376.1|1723423_1724143_+	two-component system response regulator	NA	NA	NA	NA	NA
SQJ20378.1|1724189_1724657_+	Protein of uncharacterised function (DUF1456)	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
SQJ20379.1|1724813_1725245_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	40.6	5.5e-14
SQJ20381.1|1725416_1725875_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
SQJ20384.1|1726115_1728149_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 5
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	1796445	1807881	4786558		Enterobacteria_phage(30.0%)	13	NA	NA
SQJ20771.1|1796445_1797849_+	Colanic acid biosynthesis protein wcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	6.8e-21
SQJ20779.1|1798026_1798920_+	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
SQJ20781.1|1799296_1800382_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
SQJ20783.1|1800381_1801281_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
SQJ20818.1|1801328_1802207_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	65.5	9.3e-109
SQJ20821.1|1802210_1802759_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	2.2e-52
SQJ20829.1|1802764_1803073_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
SQJ20831.1|1803098_1803758_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
SQJ20834.1|1803754_1804528_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
SQJ20836.1|1804532_1805612_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	6.6e-16
SQJ20837.1|1805638_1806364_+	lipopolysaccharide biosynthesis protein	NA	A0A0F7LAY0	uncultured_marine_virus	33.0	6.4e-23
SQJ20838.1|1806518_1806953_+	lipopolysaccharide biosynthesis protein	NA	H8ZJ36	Ostreococcus_tauri_virus	35.3	5.9e-16
SQJ20839.1|1807125_1807881_+	CDP-abequose synthase	NA	K7QJG5	Escherichia_phage	22.8	1.1e-06
>prophage 6
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	2008647	2057279	4786558	tail,terminase,integrase,holin	Salmonella_phage(21.57%)	73	2053300:2053322	2063016:2063038
SQJ21697.1|2008647_2009727_-|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.8	1.3e-101
SQJ21698.1|2009701_2009974_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
SQJ21699.1|2010052_2010469_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21712.1|2010465_2012559_-	methyltransferase	NA	H9C171	Pectobacterium_phage	51.2	6.3e-196
SQJ21730.1|2012555_2012813_-	putative DNA methyl transferase	NA	NA	NA	NA	NA
SQJ21739.1|2012906_2013086_-	Protein of uncharacterised function (DUF1187)	NA	A0A0U2QL97	Escherichia_phage	62.1	4.3e-13
SQJ21803.1|2013073_2013916_-	putative DNA methylase	NA	A0A0K1LM14	Caulobacter_phage	49.8	4.0e-69
SQJ21804.1|2013912_2014146_-	Uncharacterised protein	NA	S4TVX5	Salmonella_phage	46.2	1.6e-12
SQJ21805.1|2014343_2014661_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21806.1|2014572_2015013_-	recombination and repair protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.6	1.1e-36
SQJ21807.1|2015005_2015806_-	exonuclease VIII	NA	Q9QF34	Lambdoid_phage	85.9	9.0e-103
SQJ21808.1|2015747_2017073_-	exonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	32.2	5.1e-34
SQJ21809.1|2017059_2017698_-	exonuclease VIII	NA	A0A088CD28	Shigella_phage	38.2	2.7e-33
SQJ21810.1|2017838_2018174_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21811.1|2018249_2018456_-	prophage Kil protein	NA	I6PBM9	Cronobacter_phage	45.6	3.0e-10
SQJ21812.1|2018459_2018735_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21813.1|2018990_2019104_-	Protein of uncharacterised function (DUF1391)	NA	NA	NA	NA	NA
SQJ21814.1|2019401_2019734_-	putative regulator	NA	A0A0M4R5D1	Salmonella_phage	32.7	5.6e-06
SQJ21815.1|2020140_2020635_+	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA	NA
SQJ21816.1|2020678_2021686_+	replication protein	NA	A0A0U2RT81	Escherichia_phage	67.8	1.1e-124
SQJ21817.1|2021678_2022140_+	Replication protein 14	NA	A0A0U2JGJ0	Escherichia_phage	74.8	7.8e-67
SQJ21818.1|2022152_2022548_+	DNA-binding protein	NA	A0A088CBK9	Shigella_phage	37.0	6.4e-17
SQJ21819.1|2022544_2022817_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21820.1|2023426_2023675_+	putative bacteriophage cohesive ends	NA	NA	NA	NA	NA
SQJ21821.1|2023738_2024338_+	IrsA	NA	A0A0U2RT94	Escherichia_phage	83.9	5.0e-98
SQJ21822.1|2024334_2024529_+	Phage protein	NA	S4TNP0	Salmonella_phage	61.5	6.1e-13
SQJ21823.1|2024510_2024807_+	Protein of uncharacterised function (DUF1364)	NA	K7P7Q1	Enterobacteria_phage	79.1	2.3e-35
SQJ21824.1|2024803_2025358_+	putative bacteriophage protein	NA	A0A0U2S606	Escherichia_phage	64.6	2.8e-63
SQJ21825.1|2025830_2026238_+	Antitoxin HicB	NA	F1C593	Cronobacter_phage	63.0	1.4e-38
SQJ21826.1|2026381_2026621_+|holin	phage-holin analog protein	holin	NA	NA	NA	NA
SQJ21827.1|2026668_2027157_+	lysozyme	NA	M9P0E5	Enterobacteria_phage	68.1	2.1e-57
SQJ21828.1|2027141_2027624_+	Phage outer membrane lytic protein Rz, Endopeptidase	NA	Q8HA85	Salmonella_phage	84.9	4.7e-62
SQJ21829.1|2027823_2028087_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21830.1|2028156_2028786_+|terminase	putative prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	98.6	9.6e-108
SQJ21831.1|2028788_2030408_+	gp33 TerL	NA	A0A0M5M1R6	Salmonella_phage	81.0	3.3e-261
SQJ21832.1|2030407_2031928_+	Phage-associated protein	NA	A0A2R3UAL5	Myoviridae_environmental_samples	44.1	1.3e-105
SQJ21833.1|2031968_2032658_+	putative bacteriophage protein	NA	H9C0V1	Aeromonas_phage	50.0	4.5e-58
SQJ21834.1|2032654_2034001_+	Uncharacterized protein conserved in bacteria	NA	A0A219YCD3	Aeromonas_phage	36.5	7.1e-68
SQJ21835.1|2034002_2034485_+	Uncharacterised protein	NA	A0A1X9SFC3	Acinetobacter_phage	49.4	1.1e-26
SQJ21836.1|2034484_2034739_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21837.1|2034788_2035514_+	Uncharacterised protein	NA	Q8HAP7	Burkholderia_phage	50.0	3.0e-57
SQJ21838.1|2035517_2035865_+	Uncharacterised protein	NA	H9C0V9	Aeromonas_phage	40.2	2.3e-10
SQJ21839.1|2035871_2036327_+	Uncharacterised protein	NA	H9C0W0	Aeromonas_phage	46.0	7.3e-17
SQJ21840.1|2036320_2036905_+	Mu-like prophage protein gpG	NA	H9C0W2	Aeromonas_phage	30.6	7.2e-17
SQJ21841.1|2036901_2037267_+	Uncharacterised protein	NA	A0A077KAW7	Edwardsiella_phage	40.5	2.0e-20
SQJ21842.1|2037251_2037797_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21843.1|2037777_2039262_+	Protein of uncharacterised function (DUF3383)	NA	A0A077KGV4	Edwardsiella_phage	40.2	5.8e-95
SQJ21844.1|2039262_2039709_+	Uncharacterised protein	NA	Q2NPD1	Xanthomonas_phage	40.4	4.8e-21
SQJ21845.1|2039708_2040113_+	Uncharacterised protein	NA	H9C0W7	Aeromonas_phage	45.7	4.8e-20
SQJ21846.1|2040154_2040337_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21847.1|2040320_2040800_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21848.1|2040837_2042493_+	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	67.1	1.1e-49
SQJ21849.1|2042489_2043200_+	Uncharacterised protein	NA	A0A077KGW3	Edwardsiella_phage	34.6	5.0e-28
SQJ21850.1|2043199_2043502_+	Uncharacterised protein	NA	A0A077K9U4	Edwardsiella_phage	49.5	7.0e-24
SQJ21851.1|2043498_2044368_+	Uncharacterised protein	NA	A0A077KC17	Edwardsiella_phage	32.7	9.1e-32
SQJ21852.1|2044348_2045026_+	bacteriophage protein	NA	A0A077KAY0	Edwardsiella_phage	36.4	5.4e-32
SQJ21853.1|2045038_2045395_+	Uncharacterised protein	NA	A0A077KCA1	Edwardsiella_phage	49.1	1.6e-19
SQJ21854.1|2045391_2046633_+	bacteriophage protein	NA	A0A077KGW9	Edwardsiella_phage	49.9	1.2e-101
SQJ21855.1|2046634_2047096_+	Protein of uncharacterised function (DUF2612)	NA	A0A2R3UAM9	Myoviridae_environmental_samples	37.0	1.8e-23
SQJ21856.1|2047109_2047238_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ21857.1|2047227_2048568_+|tail	side tail fiber protein	tail	A0A0M3ULH6	Salmonella_phage	81.1	6.7e-42
SQJ21858.1|2048575_2048680_+|tail	side tail fiber protein	tail	NA	NA	NA	NA
SQJ21859.1|2048676_2049495_+	UPF0189 protein LA_4133	NA	A0A0M4QWS3	Salmonella_phage	95.6	4.8e-152
SQJ21860.1|2050211_2051066_+	HtrL protein	NA	NA	NA	NA	NA
SQJ21861.1|2051134_2051638_-	phage-like protein	NA	NA	NA	NA	NA
SQJ21862.1|2051651_2052677_-	UPF0141 membrane protein YijP possibly requiredfor phosphoethanolamine modification of lipopolysaccharide	NA	NA	NA	NA	NA
2053300:2053322	attL	GGAATCGTATTCGGTCTCTTTTT	NA	NA	NA	NA
SQJ21863.1|2053452_2054307_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	50.9	3.6e-73
SQJ21864.1|2054366_2055020_-	Rac prophage protein	NA	A0A0U2I1R6	Escherichia_phage	66.7	1.9e-26
SQJ21865.1|2055050_2055281_+	lytic enzyme	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
SQJ21866.1|2055557_2055869_+	Protein gp55	NA	NA	NA	NA	NA
SQJ21867.1|2056125_2056293_-	lytic enzyme	NA	NA	NA	NA	NA
SQJ21868.1|2056600_2056864_+	DNA breaking-rejoining protein	NA	Q9EYD0	Enterobacteria_phage	59.8	2.0e-19
SQJ21869.1|2057018_2057279_+|tail	caudovirales tail fibre assembly protein	tail	A0A0M4QWS3	Salmonella_phage	90.6	1.2e-19
2063016:2063038	attR	GGAATCGTATTCGGTCTCTTTTT	NA	NA	NA	NA
>prophage 7
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	2849483	2930398	4786558	protease,terminase,tRNA,capsid,transposase,tail,holin	Salmonella_phage(41.18%)	93	NA	NA
SQJ27394.1|2849483_2849813_+|tRNA	tRNA 2-thiouridine synthesizing protein E	tRNA	NA	NA	NA	NA
SQJ27396.1|2849809_2850091_-	acylphosphatase	NA	NA	NA	NA	NA
SQJ27397.1|2850139_2850928_-	transcriptional regulator	NA	NA	NA	NA	NA
SQJ27398.1|2850944_2851493_-	kinase inhibitor	NA	NA	NA	NA	NA
SQJ27405.1|2851707_2852919_+	LSU m5C1962 methyl transferase RlmI	NA	NA	NA	NA	NA
SQJ27406.1|2852976_2853294_+	hemimethylated DNA binding protein YccV	NA	NA	NA	NA	NA
SQJ27413.1|2853338_2853752_-	Succinyl-CoA synthetase alpha subunit-related enzyme	NA	NA	NA	NA	NA
SQJ27432.1|2853925_2854588_+	UPF0319 protein YccT precursor	NA	NA	NA	NA	NA
SQJ27467.1|2854682_2855141_+	methylglyoxal synthase	NA	NA	NA	NA	NA
SQJ27471.1|2855176_2855701_-	helicase IV	NA	NA	NA	NA	NA
SQJ27473.1|2855645_2857232_-	helicase IV	NA	A7KV33	Bacillus_phage	27.8	1.7e-20
SQJ27484.1|2857355_2857802_+	Inner membrane protein YccF	NA	NA	NA	NA	NA
SQJ27508.1|2857820_2859974_+	Putative efflux (PET) family inner membrane protein YccS	NA	NA	NA	NA	NA
SQJ27514.1|2859960_2860566_-	DNA transformation protein TfoX	NA	NA	NA	NA	NA
SQJ27518.1|2860782_2861292_+	cell division inhibitor	NA	NA	NA	NA	NA
SQJ27521.1|2861648_2862701_+	outer membrane protein A	NA	NA	NA	NA	NA
SQJ27522.1|2862839_2863226_-	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
SQJ27523.1|2863411_2865172_+|protease	protease	protease	NA	NA	NA	NA
SQJ27524.1|2865240_2865759_+	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA	NA
SQJ27525.1|2866282_2866846_-	lipoprotein	NA	NA	NA	NA	NA
SQJ27526.1|2866842_2868483_-	paraquat-inducible protein B	NA	NA	NA	NA	NA
SQJ27527.1|2868487_2869303_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
SQJ27528.1|2869259_2869742_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
SQJ27529.1|2869756_2870701_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.7	1.1e-22
SQJ27563.1|2870702_2871665_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.4	2.8e-26
SQJ27565.1|2871677_2873786_-	23S rRNA (guanine-N-2-) -methyl transferase rlmL	NA	NA	NA	NA	NA
SQJ27566.1|2873884_2874445_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA	NA
SQJ27569.1|2874386_2874935_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA	NA
SQJ27570.1|2874978_2875536_-	Z-ring-associated protein C	NA	NA	NA	NA	NA
SQJ27573.1|2875701_2876712_-	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
SQJ27574.1|2876919_2879532_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	6.3e-20
SQJ27577.1|2880035_2880209_+	Gifsy-1 prophage protein	NA	NA	NA	NA	NA
SQJ27578.1|2880720_2881680_-|transposase	transposase	transposase	NA	NA	NA	NA
SQJ27580.1|2882330_2883053_+	type III secretion protein SopE	NA	NA	NA	NA	NA
SQJ27582.1|2883986_2884646_-|tail	phage tail assembly-like protein	tail	A0A0M4QWS3	Salmonella_phage	92.7	1.1e-90
SQJ27585.1|2884642_2884747_-|tail	side tail fiber protein	tail	NA	NA	NA	NA
SQJ27587.1|2887354_2890705_-	host specificity protein J	NA	A0A0K2FI38	Escherichia_phage	69.3	0.0e+00
SQJ27589.1|2890776_2891319_-|tail	Gifsy-2 prophage probable tail assembly protein	tail	K7PH50	Enterobacteria_phage	63.1	1.4e-46
SQJ27592.1|2891378_2892116_-|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	75.6	5.2e-113
SQJ27594.1|2892125_2892821_-|tail	tail protein	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
SQJ27622.1|2892910_2893162_+	superoxide dismutase	NA	Q9MC02	Salmonella_phage	44.3	3.7e-10
SQJ27804.1|2893115_2893445_+	superoxide dismutase	NA	Q9MC02	Salmonella_phage	57.1	1.6e-26
SQJ27805.1|2893534_2894059_-	attachment/invasion protein	NA	A0A1B0VBR9	Salmonella_phage	35.3	1.8e-19
SQJ27807.1|2894157_2894490_-|tail	tail protein	tail	A5LH39	Enterobacteria_phage	61.5	2.6e-35
SQJ27808.1|2894486_2895488_-	gifsy-1 prophage VmtH	NA	A5LH38	Enterobacteria_phage	55.1	2.5e-86
SQJ27809.1|2895558_2896050_-	gifsy-1 prophage VmtH	NA	A5LH38	Enterobacteria_phage	77.6	4.2e-26
SQJ27810.1|2896030_2897575_-	gifsy-1 prophage VmtH	NA	E4WL33	Enterobacteria_phage	50.3	1.9e-125
SQJ27811.1|2897555_2897807_-|tail	tail protein	tail	A5LH37	Enterobacteria_phage	45.2	2.1e-13
SQJ27812.1|2897881_2898280_-|tail	minor tail protein	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
SQJ27813.1|2898325_2899075_-|tail	major tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
SQJ27814.1|2899086_2899488_-|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	2.0e-42
SQJ27815.1|2899484_2900051_-|tail	prophage minor tail protein Z	tail	Q9G063	Phage_Gifsy-2	95.7	2.1e-13
SQJ27818.1|2900031_2900298_-	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	46.2	4.9e-13
SQJ27851.1|2900323_2900647_-	recombinase RecA	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
SQJ27853.1|2900737_2902789_-|protease	ATP dependent Clp protease	protease	A0A291AWT6	Escherichia_phage	69.4	8.1e-265
SQJ27856.1|2902739_2904287_-|capsid	capsid protein	capsid	A0A291AWU2	Escherichia_phage	63.8	1.1e-176
SQJ27858.1|2904283_2904490_-	primosomal replication protein PriB/PriC domain protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
SQJ27861.1|2904486_2904912_-|terminase	phage terminase large subunit	terminase	A5LH27	Enterobacteria_phage	70.7	9.5e-35
SQJ27865.1|2904952_2906623_-|terminase	phage terminase large subunit	terminase	A5LH27	Enterobacteria_phage	73.0	9.6e-240
SQJ27868.1|2906582_2907116_-	Gifsy-2 prophage protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
SQJ27871.1|2907328_2907823_-	Phage outer membrane lytic protein Rz, Endopeptidase	NA	Q56118	Enterobacteria_phage	77.3	2.2e-59
SQJ27873.1|2907824_2907923_-	Phage protein	NA	NA	NA	NA	NA
SQJ27876.1|2908130_2908670_-	Phage endolysin R	NA	K7PLY1	Enterobacteria_phage	72.4	2.2e-76
SQJ27881.1|2908647_2908956_-|holin	phage-holin analog protein	holin	NA	NA	NA	NA
SQJ27883.1|2910006_2910804_-	molecular chaperone	NA	A0A0M4S661	Salmonella_phage	99.6	2.3e-151
SQJ27884.1|2910936_2911548_-	bacteriophage Lambda NinG protein	NA	A0A0M4RU10	Salmonella_phage	99.5	4.2e-92
SQJ27885.1|2911550_2911757_-	Phage protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
SQJ27887.1|2911756_2912359_-	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
SQJ27908.1|2912773_2913007_-	Gifsy-1 prophage DinI	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
SQJ27919.1|2913298_2913439_-	prophage protein	NA	NA	NA	NA	NA
SQJ27922.1|2913389_2913569_-	putative prophage protein	NA	NA	NA	NA	NA
SQJ27939.1|2913667_2913847_-	bacteriophage protein	NA	S4TNP2	Salmonella_phage	55.8	5.1e-06
SQJ27943.1|2913830_2914139_-	DNA-binding protein	NA	H6WRX9	Salmonella_phage	96.9	1.4e-48
SQJ27944.1|2914149_2914899_-	DNA replication protein DnaC	NA	S4TNF5	Salmonella_phage	99.6	1.2e-138
SQJ27947.1|2914901_2915879_-	regulatory protein	NA	H6WRX7	Salmonella_phage	99.7	7.3e-163
SQJ27950.1|2915969_2916290_-	repressor	NA	A0A0M4RU01	Salmonella_phage	100.0	1.3e-52
SQJ27953.1|2916309_2916549_-	phage regulatory protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
SQJ27956.1|2916668_2917079_+	regulatory protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
SQJ27959.1|2917381_2917552_+	DNA breaking-rejoining protein	NA	K7PGY4	Enterobacteria_phage	49.0	9.7e-07
SQJ27963.1|2917692_2920437_+	exodeoxyribonuclease	NA	S4TNL0	Salmonella_phage	92.4	0.0e+00
SQJ27966.1|2920465_2920609_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	97.9	2.9e-20
SQJ27968.1|2920619_2921729_+	Gifsy-2 prophage RecT	NA	H6WRX0	Salmonella_phage	100.0	7.1e-207
SQJ27971.1|2921771_2922011_+	putative bacteriophage protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
SQJ27973.1|2922051_2922300_+	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
SQJ27975.1|2922351_2923638_+	Integrase	NA	S4TSP2	Salmonella_phage	95.3	1.0e-233
SQJ27980.1|2923833_2925036_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
SQJ27988.1|2925116_2925743_-	amino acid:proton symporter	NA	NA	NA	NA	NA
SQJ27991.1|2925726_2926551_-	amino acid:proton symporter	NA	NA	NA	NA	NA
SQJ27994.1|2926795_2927026_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
SQJ27997.1|2927232_2927640_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
SQJ27999.1|2927864_2928014_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
SQJ28001.1|2928502_2928796_+	DNA-binding protein	NA	NA	NA	NA	NA
SQJ28003.1|2928997_2930398_+|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
>prophage 8
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	2973602	2984529	4786558	tRNA	Escherichia_phage(50.0%)	7	NA	NA
SQJ28373.1|2973602_2974082_-	anaerobic dimethyl sulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	61.5	3.3e-60
SQJ28390.1|2974187_2975753_-	anaerobic dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.3	2.1e-143
SQJ28392.1|2975781_2976552_-	anaerobic dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.2	1.4e-52
SQJ28394.1|2976788_2978081_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.5	8.6e-95
SQJ28396.1|2978339_2979683_-	Holliday junction DNA helicase	NA	G3MBE0	Bacillus_virus	40.9	1.6e-80
SQJ28397.1|2979692_2980304_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA	NA
SQJ28399.1|2980446_2984529_-	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	49.5	2.9e-88
>prophage 9
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	2995252	3002401	4786558	protease,integrase	Ralstonia_phage(16.67%)	7	2989689:2989703	3001137:3001151
2989689:2989703	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
SQJ28434.1|2995252_2995465_+|integrase	phage integrase	integrase	A0A077KET4	Ralstonia_phage	45.7	1.9e-12
SQJ28436.1|2995626_2995824_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ28438.1|2996037_2998314_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
SQJ28446.1|2998344_2998665_-|protease	ATP-dependent clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
SQJ28447.1|2998988_2999210_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
SQJ28448.1|2999339_3001286_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
3001137:3001151	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
SQJ28449.1|3001282_3002401_-	Macrolide-specific efflux protein MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 10
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	3354788	3362205	4786558	transposase	Salmonella_phage(57.14%)	9	NA	NA
SQJ30938.1|3354788_3355622_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	40.8	4.0e-45
SQJ30939.1|3355837_3356695_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
SQJ30940.1|3357033_3357363_+	sensor kinase CusS	NA	NA	NA	NA	NA
SQJ30976.1|3358231_3358594_+	translocase	NA	I1TED9	Salmonella_phage	100.0	3.9e-61
SQJ30977.1|3358590_3359517_+	bactoprenol glucosyl transferase	NA	I1TED8	Salmonella_phage	97.7	3.8e-169
SQJ30978.1|3359509_3360799_+	putative inner membrane protein	NA	B9UDL6	Salmonella_phage	40.5	7.8e-72
SQJ30979.1|3361207_3361366_-	Uncharacterised protein	NA	A0A1W5PUZ7	Salmonella_phage	67.3	8.4e-13
SQJ30980.1|3361537_3361756_+|transposase	transposase	transposase	U5P4I9	Shigella_phage	76.7	2.3e-16
SQJ30981.1|3361932_3362205_+|transposase	transposase	transposase	U5P429	Shigella_phage	86.8	2.8e-32
>prophage 11
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	3413612	3472008	4786558	transposase,protease,tRNA	Bacillus_phage(26.67%)	56	NA	NA
SQJ31266.1|3413612_3414530_+|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	protease	NA	NA	NA	NA
SQJ31267.1|3414526_3414979_+|protease	Putative activity regulator of membraneprotease YbbK	protease	NA	NA	NA	NA
SQJ31268.1|3414979_3415396_-	copper efflux regulator	NA	NA	NA	NA	NA
SQJ31269.1|3415505_3415601_+	Lead cadmium zinc and mercury transporting ATPase	NA	NA	NA	NA	NA
SQJ31270.1|3415578_3418008_+	Lead cadmium zinc and mercury transporting ATPase	NA	A0A218MNH6	uncultured_virus	37.4	7.7e-113
SQJ31271.1|3418161_3418989_+	Secreted protein	NA	NA	NA	NA	NA
SQJ31272.1|3420070_3420550_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
SQJ31273.1|3420666_3422319_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
SQJ31274.1|3422491_3423712_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
SQJ31275.1|3423926_3425450_+	transport protein	NA	NA	NA	NA	NA
SQJ31276.1|3425652_3427002_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
SQJ31277.1|3427109_3428081_+	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	6.6e-15
SQJ31278.1|3428111_3428993_-	ferrochelatase	NA	NA	NA	NA	NA
SQJ31279.1|3429271_3429916_-	adenylate kinase	NA	NA	NA	NA	NA
SQJ31280.1|3430156_3431911_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	35.4	1.7e-101
SQJ31281.1|3431858_3432032_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	62.5	7.6e-07
SQJ31282.1|3432142_3432748_-	recombination protein RecR	NA	NA	NA	NA	NA
SQJ31283.1|3432747_3433017_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
SQJ31284.1|3433946_3435053_-	DNA polymerase III subunits gamma and tau	NA	A0A1L2BWV7	Bacteriophage	41.5	1.3e-43
SQJ31285.1|3435166_3435718_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	4.6e-29
SQJ31286.1|3435870_3436248_-	Inner membrane protein YbaN	NA	NA	NA	NA	NA
SQJ31287.1|3436328_3436844_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
SQJ31288.1|3436857_3437025_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQJ31289.1|3437094_3437550_+	Transposase_31	NA	Q2A0A7	Sodalis_phage	54.2	6.8e-39
SQJ31290.1|3437651_3438155_+|transposase	Putative transposase	transposase	Q2A0A7	Sodalis_phage	48.0	3.6e-17
SQJ31291.1|3438196_3441559_-	integral membrane protein AefA	NA	NA	NA	NA	NA
SQJ31292.1|3441677_3442331_-	potential acrAB operon repressor	NA	NA	NA	NA	NA
SQJ31293.1|3442472_3443666_+	acriflavin resistance protein A	NA	NA	NA	NA	NA
SQJ31294.1|3443688_3446838_+	acriflavin resistance protein B	NA	NA	NA	NA	NA
SQJ31295.1|3447334_3447709_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
SQJ31296.1|3447736_3447955_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
SQJ31297.1|3448133_3448685_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
SQJ31298.1|3448801_3449272_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQJ31299.1|3449473_3449734_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQJ31300.1|3449958_3450990_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
SQJ31301.1|3450994_3451510_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
SQJ31302.1|3451819_3452131_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
SQJ31303.1|3452163_3452733_-	lipoprotein	NA	NA	NA	NA	NA
SQJ31304.1|3452947_3453808_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
SQJ31305.1|3453907_3454831_-	ammonium transporter	NA	NA	NA	NA	NA
SQJ31306.1|3455226_3455565_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
SQJ31307.1|3455777_3456986_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	30.1	9.7e-24
SQJ31308.1|3456948_3457560_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	28.4	9.9e-09
SQJ31309.1|3457552_3459325_-	ABC transporter ATP-binding membrane protein	NA	W8CYL7	Bacillus_phage	29.9	6.1e-51
SQJ31310.1|3459365_3459824_-	transcriptional regulator	NA	NA	NA	NA	NA
SQJ31311.1|3459936_3460992_+	lyase	NA	NA	NA	NA	NA
SQJ31312.1|3461041_3461860_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
SQJ31313.1|3461960_3463661_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQJ31314.1|3463725_3464421_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.4	1.2e-87
SQJ31315.1|3464526_3464925_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA	NA
SQJ31316.1|3465028_3465403_-	competence protein ComEA	NA	NA	NA	NA	NA
SQJ31317.1|3465552_3467424_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
SQJ31318.1|3467714_3467987_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
SQJ31319.1|3468195_3470415_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	53.2	1.9e-214
SQJ31320.1|3470365_3470551_-|protease	Lon protease	protease	NA	NA	NA	NA
SQJ31321.1|3470736_3472008_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	5.6e-131
>prophage 12
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	4240114	4287160	4786558	transposase,protease,tRNA	Vibrio_phage(25.0%)	56	NA	NA
SQJ33072.1|4240114_4241119_-|protease	FtsH protease regulator HflC	protease	NA	NA	NA	NA
SQJ33073.1|4241121_4242381_-|protease	protease	protease	NA	NA	NA	NA
SQJ33074.1|4242596_4243877_-|protease	GTP-binding subunit of protease	protease	NA	NA	NA	NA
SQJ33076.1|4243948_4244257_-	host factor-I protein(HF-I)	NA	NA	NA	NA	NA
SQJ33081.1|4244339_4244804_-|tRNA	tRNA delta-2-isopentenylpyrophosphate (IPP) transferase	tRNA	NA	NA	NA	NA
SQJ33082.1|4244751_4245291_-|tRNA	tRNA delta-2-isopentenylpyrophosphate (IPP) transferase	tRNA	NA	NA	NA	NA
SQJ33083.1|4245283_4247113_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	39.9	9.7e-52
SQJ33084.1|4247150_4248473_-	N-acetylmuramoyl-l-alanine amidase II	NA	A0A067ZJB6	Vibrio_phage	29.2	1.8e-15
SQJ33086.1|4248489_4248951_-	ATPase YjeE predicted to have essential rolein cell wall biosynthesis	NA	NA	NA	NA	NA
SQJ33088.1|4248922_4250455_-	carbohydrate kinase	NA	NA	NA	NA	NA
SQJ33090.1|4250468_4251272_+	Fe-S protein	NA	NA	NA	NA	NA
SQJ33091.1|4251300_4251609_+	Fe-S protein	NA	NA	NA	NA	NA
SQJ33109.1|4252716_4253136_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQJ33110.1|4253216_4253438_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQJ33111.1|4253499_4254045_-	Oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.6	4.5e-29
SQJ33112.1|4254151_4254445_+	ribosome-associated GTPase	NA	NA	NA	NA	NA
SQJ33114.1|4254449_4255193_+	ribosome-associated GTPase	NA	NA	NA	NA	NA
SQJ33118.1|4255297_4256296_+	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
SQJ33119.1|4256286_4256628_+	Potassium efflux system KefA protein	NA	NA	NA	NA	NA
SQJ33121.1|4256744_4257302_+	Potassium efflux system KefA protein	NA	NA	NA	NA	NA
SQJ33125.1|4257469_4259056_+	Potassium efflux system KefA protein	NA	NA	NA	NA	NA
SQJ33126.1|4259018_4259621_+	Potassium efflux system KefA protein	NA	NA	NA	NA	NA
SQJ33127.1|4259757_4260135_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ33129.1|4260142_4260592_-	amino acid permease	NA	NA	NA	NA	NA
SQJ33131.1|4260572_4261292_-	amino acid permease	NA	NA	NA	NA	NA
SQJ33139.1|4261260_4261647_-	amino acid permease	NA	NA	NA	NA	NA
SQJ33141.1|4261872_4262850_-|tRNA	lysyl-tRNA synthetase	tRNA	A0A2K9KZX5	Tupanvirus	29.1	1.7e-26
SQJ33142.1|4263172_4264963_+	fumarate reductase flavoprotein subunit	NA	NA	NA	NA	NA
SQJ33143.1|4264955_4265690_+	fumarate reductase, iron-sulfur protein	NA	NA	NA	NA	NA
SQJ33144.1|4265700_4266096_+	fumarate reductase complex subunit C; membrane anchor polypeptide	NA	NA	NA	NA	NA
SQJ33145.1|4266106_4266466_+	fumarate reductase complex subunit D; membrane anchor polypeptide	NA	NA	NA	NA	NA
SQJ33146.1|4266577_4267111_+	lipoprotein	NA	A0A1W6JNX6	Morganella_phage	54.8	9.4e-48
SQJ33147.1|4267127_4267445_-	SugE protein	NA	NA	NA	NA	NA
SQJ33148.1|4267701_4268289_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
SQJ33149.1|4268573_4268738_-	entericidin A	NA	NA	NA	NA	NA
SQJ33150.1|4268768_4269335_-	Elongation factor P EF-P	NA	NA	NA	NA	NA
SQJ33151.1|4269375_4270404_+	Lysyl-lysine 23-aminomutase	NA	NA	NA	NA	NA
SQJ33152.1|4270685_4271543_+	inner membrane protein	NA	NA	NA	NA	NA
SQJ33153.1|4271590_4271944_-	membrane protein	NA	NA	NA	NA	NA
SQJ33154.1|4272178_4273825_-	GroEL protein	NA	A0A2I7SAK5	Vibrio_phage	68.7	1.2e-189
SQJ33161.1|4273868_4274162_-	GroES protein	NA	K4F9I2	Cronobacter_phage	43.3	1.2e-12
SQJ33163.1|4274465_4275680_+	transporter	NA	NA	NA	NA	NA
SQJ33164.1|4275738_4276215_-	FxsA protein	NA	NA	NA	NA	NA
SQJ33165.1|4276555_4277320_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
SQJ33166.1|4277390_4277993_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
SQJ33168.1|4278107_4279409_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
SQJ33169.1|4279529_4279877_+	Divalent cation tolerance protein	NA	NA	NA	NA	NA
SQJ33170.1|4279961_4280948_+	thiol:disulfide interchange protein DsbD	NA	NA	NA	NA	NA
SQJ33171.1|4280934_4281558_+	thiol:disulfide interchange protein DsbD	NA	NA	NA	NA	NA
SQJ33172.1|4281594_4282170_+	transcriptional regulator	NA	NA	NA	NA	NA
SQJ33173.1|4283071_4283479_+	acid phosphatase	NA	NA	NA	NA	NA
SQJ33174.1|4283450_4283825_+	acid phosphatase	NA	NA	NA	NA	NA
SQJ33175.1|4283967_4284501_+|transposase	transposase IS1113	transposase	NA	NA	NA	NA
SQJ33178.1|4284562_4284853_+|transposase	putative transposase for insertion sequence element ISRM3-like protein	transposase	A0A218MNI5	uncultured_virus	74.3	1.2e-07
SQJ33180.1|4285101_4286103_-	putative periplasmic protein	NA	NA	NA	NA	NA
SQJ33182.1|4286728_4287160_+|transposase	IS3, transposase orfA	transposase	NA	NA	NA	NA
>prophage 13
LS483494	Salmonella enterica subsp. enterica serovar Heidelberg strain NCTC5717 genome assembly, chromosome: 1	4786558	4384069	4431691	4786558	tail,plate,tRNA	Burkholderia_phage(42.86%)	52	NA	NA
SQJ33287.1|4384069_4385068_-|tRNA	tRNA dihydrouridine synthase A	tRNA	NA	NA	NA	NA
SQJ33288.1|4385282_4386467_-	conjugative transfer protein	NA	NA	NA	NA	NA
SQJ33289.1|4386713_4387229_+	zinc uptake regulation protein	NA	NA	NA	NA	NA
SQJ33290.1|4387327_4387540_-	stress-response protein	NA	NA	NA	NA	NA
SQJ33291.1|4387558_4387687_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ33292.1|4387668_4388994_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA	NA
SQJ33293.1|4389172_4389781_-	LexA repressor	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
SQJ33294.1|4389889_4390258_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SQJ33295.1|4390428_4392849_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SQJ33296.1|4392947_4393820_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
SQJ33297.1|4393833_4394331_-	chorismate lyase	NA	NA	NA	NA	NA
SQJ33298.1|4394511_4395078_-	maltose operon periplasmic protein	NA	NA	NA	NA	NA
SQJ33299.1|4395214_4395430_-	maltose operon periplasmic protein	NA	NA	NA	NA	NA
SQJ33300.1|4395593_4396952_-	maltoporin	NA	NA	NA	NA	NA
SQJ33301.1|4397040_4398150_-	maltose/maltodextrin transport ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
SQJ33302.1|4398512_4399703_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA	NA
SQJ33303.1|4399834_4401379_+	maltose transport inner membrane protein	NA	NA	NA	NA	NA
SQJ33304.1|4401393_4401516_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ33305.1|4401475_4402525_+	maltose transport inner membrane protein	NA	NA	NA	NA	NA
SQJ33306.1|4402452_4402863_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
SQJ33308.1|4403005_4405102_-	lipoprotein	NA	NA	NA	NA	NA
SQJ33310.1|4405101_4405839_-	putative lipoprotein	NA	NA	NA	NA	NA
SQJ33311.1|4405835_4406474_-	outer membrane lipoprotein	NA	NA	NA	NA	NA
SQJ33312.1|4406537_4406783_-	YjbE secreted protein	NA	NA	NA	NA	NA
SQJ33313.1|4407223_4408873_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
SQJ33314.1|4409217_4410564_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA	NA
SQJ33315.1|4410700_4411048_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
SQJ33319.1|4411624_4411912_+	membrane protein	NA	Q6QIC8	Burkholderia_phage	49.1	2.3e-16
SQJ33320.1|4411947_4412508_+	lytic murein transglycosylase	NA	Q5ZQZ1	Pseudomonas_phage	60.7	3.4e-56
SQJ33321.1|4412533_4412848_+	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
SQJ33322.1|4413008_4413464_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQJ33323.1|4413460_4413658_+	gp12	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
SQJ33324.1|4413647_4415075_+|tail	tail protein	tail	A4JWK5	Burkholderia_virus	70.9	1.1e-194
SQJ33325.1|4415074_4415599_+|tail	tail protein	tail	Q6QIA9	Burkholderia_phage	69.0	2.3e-67
SQJ33327.1|4415650_4415968_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQJ33328.1|4416152_4416887_+|tail	tail protein	tail	NA	NA	NA	NA
SQJ33329.1|4416858_4418508_+|tail	tail protein	tail	A4JWL0	Burkholderia_virus	33.5	3.6e-61
SQJ33330.1|4418507_4419326_+	methyl-accepting chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	2.0e-36
SQJ33331.1|4419461_4419671_+	membrane protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
SQJ33332.1|4419658_4420702_+	gp21	NA	Q6QIA2	Burkholderia_phage	45.1	2.5e-76
SQJ33333.1|4420711_4421380_+|plate	baseplate protein	plate	A0A067ZIM2	Vibrio_phage	41.0	3.0e-11
SQJ33334.1|4422121_4423051_+	bactoprenol glucosyl transferase	NA	S5FKN0	Shigella_phage	84.1	1.4e-150
SQJ33335.1|4423050_4424598_+	membrane protein	NA	B9UDL6	Salmonella_phage	29.9	3.8e-49
SQJ33336.1|4424761_4425121_+|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
SQJ33337.1|4425111_4425225_+|plate	baseplate protein	plate	NA	NA	NA	NA
SQJ33338.1|4425181_4426228_+|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	52.0	4.7e-91
SQJ33339.1|4426220_4426853_+|tail	tail fiber protein	tail	Q6QI98	Burkholderia_phage	56.4	8.6e-24
SQJ33340.1|4426855_4428514_+|tail	phage tail fiber protein H	tail	A0A0M3ULF6	Salmonella_phage	52.7	1.8e-52
SQJ33342.1|4428520_4429135_+|tail	Phage tail fiber assembly	tail	NA	NA	NA	NA
SQJ33343.1|4429131_4429587_+	cytoplasmic protein	NA	NA	NA	NA	NA
SQJ33344.1|4429907_4430384_+	serine acetyltransferase	NA	NA	NA	NA	NA
SQJ33356.1|4430962_4431691_+	cytoplasmic protein	NA	A0A077SLK3	Escherichia_phage	37.3	7.3e-35
