assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900478345.1_31340_E01	LS483490	Salmonella enterica subsp. enterica strain NCTC7836 genome assembly, chromosome: 1	2	634082-634459	1	PILER-CR	no		cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	Orphan	GGCGGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTAT	54	2	8	634136-634189|634136-634189|634136-634189|634136-634189|634244-634297|634244-634297|634244-634297|634244-634297	LS483490.1_634568-634621|LS483490.1_634676-634729|LS483490.1_634460-634513|LS483490.1_634784-634837|LS483490.1_634460-634513|LS483490.1_634568-634621|LS483490.1_634676-634729|LS483490.1_634784-634837	NA	3	3	Orphan	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|348aa|up_9|LS483490.1_622853_623897_-	PRK10309, PRK10309, galactitol-1-phosphate 5-dehydrogenase	NA|458aa|up_8|LS483490.1_623940_625314_-	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|95aa|up_7|LS483490.1_625317_625602_-	PRK10310, PRK10310, PTS galactitol transporter subunit IIB	NA|155aa|up_6|LS483490.1_625632_626097_-	PRK09665, PRK09665, PTS galactitol transporter subunit IIA	NA|424aa|up_5|LS483490.1_626111_627383_-	PRK15052, PRK15052, tagatose-bisphosphate aldolase subunit GatZ	NA|285aa|up_4|LS483490.1_627502_628357_-	PRK09195, gatY, tagatose-bisphosphate aldolase; Reviewed	NA|524aa|up_3|LS483490.1_628614_630186_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|257aa|up_2|LS483490.1_630715_631486_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|LS483490.1_631511_632402_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|LS483490.1_632499_633645_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|313aa|down_0|LS483490.1_635531_636470_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_1|LS483490.1_636567_637557_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_2|LS483490.1_637577_638909_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|226aa|down_3|LS483490.1_638974_639652_+	PRK12379, PRK12379, propionate kinase	NA|112aa|down_4|LS483490.1_639642_639978_+	PRK12379, PRK12379, propionate kinase	NA|66aa|down_5|LS483490.1_639989_640187_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_6|LS483490.1_640220_642515_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|455aa|down_7|LS483490.1_642584_643949_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_8|LS483490.1_644263_645595_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|340aa|down_9|LS483490.1_645620_646640_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]
GCA_900478345.1_31340_E01	LS483490	Salmonella enterica subsp. enterica strain NCTC7836 genome assembly, chromosome: 1	3	957959-958962	2,2,1,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,TTCCCCGCGCCAGCGGGGATAAACCG	29,29,29,26	0	0	NA	NA	I-E:I-E:I-E:I-E	13,16,16,13	16	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|138aa|up_9|LS483490.1_947041_947455_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|167aa|up_8|LS483490.1_947527_948028_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|110aa|up_7|LS483490.1_948053_948383_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|66aa|up_6|LS483490.1_948626_948824_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|875aa|up_5|LS483490.1_948856_951481_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|LS483490.1_951614_952202_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|LS483490.1_952808_953609_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|LS483490.1_953836_955474_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|LS483490.1_955556_956855_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|LS483490.1_956990_957662_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|LS483490.1_959059_959857_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|LS483490.1_959946_960309_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|LS483490.1_960732_962532_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|LS483490.1_962531_964244_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|LS483490.1_964345_965080_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|LS483490.1_965167_966121_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|down_6|LS483490.1_966564_969228_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|304aa|down_7|LS483490.1_969239_970151_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas8e|173aa|down_8|LS483490.1_970276_970795_+	cd09669, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|187aa|down_9|LS483490.1_970791_971352_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2
GCA_900478345.1_31340_E01	LS483490	Salmonella enterica subsp. enterica strain NCTC7836 genome assembly, chromosome: 1	4	975118-976183	4,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCGN	29,29,30	0	0	NA	NA	I-E:I-E:I-E	17,17,17	17	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|318aa|up_9|LS483490.1_965167_966121_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|up_8|LS483490.1_966564_969228_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|304aa|up_7|LS483490.1_969239_970151_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas8e|173aa|up_6|LS483490.1_970276_970795_+	cd09669, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|187aa|up_5|LS483490.1_970791_971352_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|168aa|up_4|LS483490.1_971365_971869_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas7|197aa|up_3|LS483490.1_971832_972423_+	cd09646, Cas7_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas6e|217aa|up_2|LS483490.1_973160_973811_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|296aa|up_1|LS483490.1_973807_974695_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LS483490.1_974727_975021_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|LS483490.1_976197_977244_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LS483490.1_977494_978403_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|LS483490.1_978412_979852_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LS483490.1_979838_980444_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LS483490.1_980494_980818_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LS483490.1_981008_981320_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LS483490.1_981338_982049_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LS483490.1_982048_982528_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LS483490.1_982524_983574_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LS483490.1_983554_984316_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
