assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900478285.1_36005_G01	LS483483	Klebsiella oxytoca strain NCTC11355 genome assembly, chromosome: 1	1	2020138-2020208	1	CRISPRCasFinder	no		RT,DEDDh,WYL,DinG,cas3,csa3	Orphan	CTGCGCATCTGTCCGGGCTACCG	23	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,WYL,DinG,cas3,csa3	NA|218aa|up_9|LS483483.1_2010891_2011545_-,NA	NA|218aa|up_9|LS483483.1_2010891_2011545_-	NA	NA|140aa|up_8|LS483483.1_2011541_2011961_-	pfam03928, Haem_degrading, Haem-degrading	NA|448aa|up_7|LS483483.1_2011966_2013310_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|271aa|up_6|LS483483.1_2013331_2014144_-	pfam05853, BKACE, beta-keto acid cleavage enzyme	NA|259aa|up_5|LS483483.1_2014172_2014949_-	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|269aa|up_4|LS483483.1_2014929_2015736_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|215aa|up_3|LS483483.1_2015745_2016390_-	PRK08130, PRK08130, putative aldolase; Validated	NA|419aa|up_2|LS483483.1_2016386_2017643_-	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown]	NA|231aa|up_1|LS483483.1_2018021_2018714_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|301aa|up_0|LS483483.1_2019096_2019999_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|201aa|down_0|LS483483.1_2020319_2020922_-	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase	NA|551aa|down_1|LS483483.1_2020931_2022584_-	PRK15392, PRK15392, class I fumarate hydratase	NA|334aa|down_2|LS483483.1_2022595_2023597_-	PRK12356, PRK12356, glutaminase; Reviewed	NA|436aa|down_3|LS483483.1_2023671_2024979_-	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|41aa|down_4|LS483483.1_2025539_2025662_-	pfam14330, DUF4387, Domain of unknown function (DUF4387)	NA|457aa|down_5|LS483483.1_2025658_2027029_-	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|414aa|down_6|LS483483.1_2027032_2028274_-	COG3799, Mal, Methylaspartate ammonia-lyase [Amino acid transport and metabolism]	NA|482aa|down_7|LS483483.1_2028273_2029719_-	TIGR01503, Glutamate_mutase_epsilon_subunit, methylaspartate mutase, E subunit	NA|386aa|down_8|LS483483.1_2029735_2030893_-	TIGR01319, glmL_fam, conserved hypothetical protein	NA|150aa|down_9|LS483483.1_2031124_2031574_-	PRK02261, PRK02261, methylaspartate mutase subunit S; Provisional
GCA_900478285.1_36005_G01	LS483483	Klebsiella oxytoca strain NCTC11355 genome assembly, chromosome: 1	2	2256622-2256771	2	CRISPRCasFinder	no		RT,DEDDh,WYL,DinG,cas3,csa3	Orphan	TGTTCACTGCCGTACAGGCAGCTTAGAAA	29	0	0	NA	NA	I-F	2	2	Orphan	RT,DEDDh,WYL,DinG,cas3,csa3	NA,NA	NA|172aa|up_9|LS483483.1_2248628_2249144_-	PRK10533, PRK10533, putative lipoprotein; Provisional	NA|108aa|up_8|LS483483.1_2249261_2249585_+	PRK02877, PRK02877, hypothetical protein; Provisional	NA|119aa|up_7|LS483483.1_2249581_2249938_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|179aa|up_6|LS483483.1_2249876_2250413_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|338aa|up_5|LS483483.1_2250409_2251423_-	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|478aa|up_4|LS483483.1_2251519_2252953_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|337aa|up_3|LS483483.1_2252895_2253906_-	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|144aa|up_2|LS483483.1_2254121_2254553_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|439aa|up_1|LS483483.1_2254522_2255839_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|141aa|up_0|LS483483.1_2256112_2256535_+	pfam07681, DoxX, DoxX	NA|323aa|down_0|LS483483.1_2256818_2257787_-	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|551aa|down_1|LS483483.1_2257797_2259450_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|306aa|down_2|LS483483.1_2259576_2260494_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|down_3|LS483483.1_2260617_2261313_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|424aa|down_4|LS483483.1_2261694_2262966_+	pfam11398, DUF2813, Protein of unknown function (DUF2813)	NA|125aa|down_5|LS483483.1_2262979_2263354_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|372aa|down_6|LS483483.1_2263528_2264644_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|down_7|LS483483.1_2264640_2266587_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|77aa|down_8|LS483483.1_2266655_2266886_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|106aa|down_9|LS483483.1_2267210_2267528_+	COG2127, COG2127, Uncharacterized conserved protein [Function unknown]
GCA_900478285.1_36005_G01	LS483483	Klebsiella oxytoca strain NCTC11355 genome assembly, chromosome: 1	3	3623817-3623927	3	CRISPRCasFinder	no		RT,DEDDh,WYL,DinG,cas3,csa3	Orphan	CCTGTAGCCCGGGCAAGGCGCGGCCCTGCCGCGC	34	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,WYL,DinG,cas3,csa3	NA,NA|271aa|down_9|LS483483.1_3633387_3634200_-	NA|256aa|up_9|LS483483.1_3614699_3615467_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|257aa|up_8|LS483483.1_3615531_3616302_-	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|300aa|up_7|LS483483.1_3616397_3617297_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|316aa|up_6|LS483483.1_3617293_3618241_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|57aa|up_5|LS483483.1_3618257_3618428_-	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|294aa|up_4|LS483483.1_3618428_3619310_-	pfam01032, FecCD, FecCD transport family	NA|347aa|up_3|LS483483.1_3619306_3620347_-	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_2|LS483483.1_3620327_3621149_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|200aa|up_1|LS483483.1_3621707_3622307_+	pfam07715, Plug, TonB-dependent Receptor Plug Domain	NA|467aa|up_0|LS483483.1_3622330_3623731_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|263aa|down_0|LS483483.1_3623988_3624777_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|332aa|down_1|LS483483.1_3624770_3625766_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|346aa|down_2|LS483483.1_3625746_3626784_-	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|325aa|down_3|LS483483.1_3626780_3627755_-	cd13558, PBP2_SsuA_like_2, Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold	NA|713aa|down_4|LS483483.1_3627766_3629905_-	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite	NA|298aa|down_5|LS483483.1_3630141_3631035_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|199aa|down_6|LS483483.1_3631142_3631739_+	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]	NA|284aa|down_7|LS483483.1_3631740_3632592_+	cd01533, 4RHOD_Repeat_2, Member of the Rhodanese Homology Domain superfamily, repeat 2	NA|205aa|down_8|LS483483.1_3632707_3633322_+	cd01535, 4RHOD_Repeat_4, Member of the Rhodanese Homology Domain superfamily, repeat 4	NA|271aa|down_9|LS483483.1_3633387_3634200_-	NA
GCA_900478285.1_36005_G01	LS483483	Klebsiella oxytoca strain NCTC11355 genome assembly, chromosome: 1	4	5018503-5018608	4	CRISPRCasFinder	no	csa3	RT,DEDDh,WYL,DinG,cas3,csa3	Type I-A	TGCCCTCCTTTTGGAGGGCTTTTT	24	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,WYL,DinG,cas3,csa3	NA,NA|40aa|down_6|LS483483.1_5023938_5024058_-,NA|82aa|down_9|LS483483.1_5025416_5025662_+	NA|85aa|up_9|LS483483.1_5006880_5007135_+	pfam14583, Pectate_lyase22, Oligogalacturonate lyase	NA|341aa|up_8|LS483483.1_5007525_5008548_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|365aa|up_7|LS483483.1_5008860_5009955_-	pfam16966, Porin_8, Porin-like glycoporin RafY	NA|100aa|up_6|LS483483.1_5009908_5010208_-	pfam11471, Sugarporin_N, Maltoporin periplasmic N-terminal extension	NA|478aa|up_5|LS483483.1_5010321_5011755_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|414aa|up_4|LS483483.1_5011773_5013015_-	PRK09528, lacY, galactoside permease; Reviewed	NA|332aa|up_3|LS483483.1_5013256_5014252_+	cd06288, PBP1_sucrose_transcription_regulator, ligand-binding domain of DNA-binding regulatory proteins specific to sucrose that are members of the LacI-GalR family of bacterial transcription repressors	NA|473aa|up_2|LS483483.1_5014252_5015671_-	TIGR00879, Membrane_transporter, MFS transporter, sugar porter (SP) family	NA|254aa|up_1|LS483483.1_5015982_5016744_-	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|392aa|up_0|LS483483.1_5017286_5018462_+	pfam14583, Pectate_lyase22, Oligogalacturonate lyase	NA|232aa|down_0|LS483483.1_5018796_5019492_-	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM)	NA|392aa|down_1|LS483483.1_5019736_5020912_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|246aa|down_2|LS483483.1_5021338_5022076_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|154aa|down_3|LS483483.1_5022172_5022634_+	COG4125, COG4125, Predicted membrane protein [Function unknown]	NA|168aa|down_4|LS483483.1_5023065_5023569_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|51aa|down_5|LS483483.1_5023600_5023753_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|40aa|down_6|LS483483.1_5023938_5024058_-	NA	NA|116aa|down_7|LS483483.1_5024119_5024467_+	PRK10376, PRK10376, putative oxidoreductase; Provisional	NA|114aa|down_8|LS483483.1_5024655_5024997_+	PRK10376, PRK10376, putative oxidoreductase; Provisional	NA|82aa|down_9|LS483483.1_5025416_5025662_+	NA
