The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	586190	592501	1890469	head,tail,terminase	uncultured_Caudovirales_phage(87.5%)	8	NA	NA
SQI74000.1|586190_587378_+	phage phi-c31 gp36-like protein. phage phi-c31 gp36-like protein	NA	A0A2H4JED2	uncultured_Caudovirales_phage	63.3	9.5e-133
SQI74001.1|587431_587998_+	phage phi-c31 gp35-like protein	NA	A0A2H4JB68	uncultured_Caudovirales_phage	63.4	6.3e-50
SQI74002.1|587999_589232_+	phage phi-105 orf25-like protein	NA	A0A2H4JFJ9	uncultured_Caudovirales_phage	62.5	6.2e-143
SQI74003.1|589215_589560_+|head,tail	phage head-tail adaptor	head,tail	A0A1J0GUY4	Halomonas_phage	31.9	1.0e-07
SQI74004.1|589546_589861_+	bacteriophage protein	NA	A0A2H4JD08	uncultured_Caudovirales_phage	48.5	1.6e-18
SQI74005.1|589875_590262_+	phage associated protein	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	53.6	2.4e-29
SQI74006.1|590458_590827_+	bacteriophage protein	NA	A0A2H4JHS3	uncultured_Caudovirales_phage	67.0	8.0e-38
SQI74087.1|590833_592501_+|terminase	phage d3 terminase-like protein	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	71.6	3.6e-247
>prophage 2
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	987671	996980	1890469	tRNA	Faustovirus(16.67%)	9	NA	NA
SQI75397.1|987671_988781_+	cystathionine gamma-synthase	NA	A0A141ZJM2	Faustovirus	27.2	8.3e-14
SQI75403.1|988793_989789_+	fermentative D-lactate dehydrogenase, NAD-dependent	NA	M1H502	Paramecium_bursaria_Chlorella_virus	39.9	3.8e-66
SQI75408.1|989908_990232_+	thioredoxin 1	NA	A0A1J0GW78	Streptomyces_phage	43.4	8.9e-17
SQI75410.1|990300_990555_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI75414.1|990884_991673_-	DNase	NA	NA	NA	NA	NA
SQI75434.1|991727_992237_-	peptidyl-prolyl cis-trans isomerase B	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	32.4	1.6e-12
SQI75440.1|992339_993719_+|tRNA	cysteinyl-tRNA synthetase	tRNA	A0A1V0SAQ2	Catovirus	29.5	3.3e-52
SQI75445.1|993877_994738_-	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
SQI75490.1|994856_996980_-	anaerobic ribonucleoside triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.5	1.1e-259
>prophage 3
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	1258266	1329433	1890469	tail,protease,transposase,tRNA,holin,integrase,plate	Haemophilus_phage(17.95%)	88	1274040:1274058	1325454:1325472
SQI76408.1|1258266_1260000_-|tRNA	arginyl-tRNA synthetase	tRNA	A0A1V0SIS8	Klosneuvirus	35.8	8.8e-87
SQI76412.1|1260079_1260649_+	metal-binding protein	NA	NA	NA	NA	NA
SQI76413.1|1260975_1261440_+	15 kDa peptidoglycan-associated lipoprotein	NA	NA	NA	NA	NA
SQI76415.1|1261614_1263264_-	glucosephosphate isomerase	NA	NA	NA	NA	NA
SQI76416.1|1263360_1264443_-	alanine racemase 1, PLP-binding, biosynthetic	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	30.1	4.6e-33
SQI76417.1|1264452_1265859_-	replicative DNA helicase	NA	O80281	Escherichia_phage	68.5	4.4e-169
SQI76422.1|1266000_1267437_-	pyruvate kinase	NA	NA	NA	NA	NA
SQI76425.1|1267978_1268764_+|integrase	prophage CP4-57-like integrase	integrase	A0A0R6PH06	Moraxella_phage	34.4	1.1e-25
SQI76443.1|1268807_1269227_+|integrase	prophage CP4-57-like integrase	integrase	A0A1V0E8G8	Vibrio_phage	38.8	2.0e-21
SQI76449.1|1269223_1269412_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
SQI76452.1|1269453_1269573_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76463.1|1269651_1270305_-	phage antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	81.9	5.4e-45
SQI76464.1|1270610_1271315_-	protein serine/threonine phosphatase, protein phosphatase 2C-like protein	NA	I6PCV8	Cronobacter_phage	44.0	2.7e-50
SQI76471.1|1271318_1272080_-	serine/threonine protein kinase	NA	I6PD73	Cronobacter_phage	43.8	1.7e-50
SQI76473.1|1272195_1272555_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76475.1|1272551_1272788_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76477.1|1273575_1273788_-	putative oxidoreductase	NA	NA	NA	NA	NA
SQI76480.1|1273939_1274332_-	Uncharacterised protein	NA	NA	NA	NA	NA
1274040:1274058	attL	GCAAAATTGACCGCACTTT	NA	NA	NA	NA
SQI76482.1|1274315_1274555_-	flavodoxin	NA	NA	NA	NA	NA
SQI76484.1|1274627_1274912_+|transposase	IS1 transposase	transposase	A0A218MNH2	uncultured_virus	59.0	6.8e-05
SQI76486.1|1274995_1275208_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76488.1|1275897_1276218_+	Protein of uncharacterised function, DUF	NA	NA	NA	NA	NA
SQI76490.1|1276231_1276561_+	multicopper oxidase type 3	NA	NA	NA	NA	NA
SQI76493.1|1277117_1277522_+	Arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.9	1.0e-33
SQI76495.1|1277525_1277708_+	arsenite transport protein	NA	NA	NA	NA	NA
SQI76498.1|1278082_1278544_+	arsenite transport protein	NA	NA	NA	NA	NA
SQI76500.1|1278638_1278833_-	transport protein	NA	NA	NA	NA	NA
SQI76502.1|1278774_1279242_-	transport protein	NA	NA	NA	NA	NA
SQI76505.1|1279344_1279638_+	transcriptional regulator	NA	NA	NA	NA	NA
SQI76507.1|1280145_1280778_-	oxidoreductase	NA	NA	NA	NA	NA
SQI76510.1|1280838_1281117_+	cation/multidrug efflux protein	NA	NA	NA	NA	NA
SQI76512.1|1281166_1281577_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76525.1|1281578_1283618_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI76527.1|1283620_1285141_-|integrase	Putative integrase	integrase	NA	NA	NA	NA
SQI76594.1|1285127_1286414_-|integrase	Putative integrase	integrase	NA	NA	NA	NA
SQI76598.1|1286558_1286993_-	ssDNA-binding protein	NA	L7TJL2	Pseudomonas_virus	35.1	3.4e-19
SQI76621.1|1286992_1287643_-	Uncharacterised protein	NA	A0A0M3LP90	Mannheimia_phage	71.1	2.0e-84
SQI76622.1|1287617_1288538_-	recombinational DNA repair protein, rece pathway	NA	A0A0M3LNU3	Mannheimia_phage	71.5	6.3e-116
SQI76633.1|1288550_1288844_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76648.1|1288827_1289322_-	Uncharacterised protein	NA	A0A0M3LSK4	Mannheimia_phage	37.5	5.5e-18
SQI76649.1|1289321_1289666_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76651.1|1289760_1290390_-	Putative prophage antirepressor protein	NA	A0A1J0MFR6	Staphylococcus_phage	44.4	4.3e-23
SQI76653.1|1291429_1291639_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76658.1|1291652_1291826_+	Uncharacterized conserved protein	NA	A0A2P1N580	Mycobacterium_phage	62.5	6.8e-08
SQI76659.1|1292318_1293134_-	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA	NA
SQI76660.1|1293130_1293838_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI76661.1|1293937_1294603_-	prophage repressor	NA	A0A1I9KG86	Aeromonas_phage	43.8	1.6e-41
SQI76662.1|1294703_1294943_+	regulatory protein	NA	A0A2I6PIE5	Escherichia_phage	49.2	7.0e-11
SQI76663.1|1294969_1295266_+	phage aaphi23	NA	Q7Y5W3	Haemophilus_phage	70.4	1.5e-31
SQI76664.1|1295505_1295856_+	putative phage DNA replication protein O	NA	A0A0P0IKQ2	Acinetobacter_phage	52.6	1.0e-13
SQI76665.1|1295944_1297132_-	CP4-6 prophage DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
SQI76666.1|1297435_1297804_+|tail	phage tail length determination protein	tail	F6MIL1	Haemophilus_phage	28.2	3.1e-05
SQI76667.1|1297841_1298708_+|tail	phage tail length determination protein	tail	A0A0M3LPB6	Mannheimia_phage	31.4	3.3e-18
SQI76675.1|1298711_1300049_+	putative phage virion protein	NA	F6MIL2	Haemophilus_phage	44.5	5.0e-106
SQI76677.1|1300038_1301163_+	bacteriophage Mu P family protein	NA	F6MIL3	Haemophilus_phage	71.5	4.3e-143
SQI76689.1|1301172_1301808_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	58.7	1.2e-62
SQI76690.1|1301877_1302228_+	phage GP46 family protein	NA	A0A0M3LQK5	Mannheimia_phage	74.1	4.1e-44
SQI76692.1|1302242_1303307_+|tail	Mu phage tail protein gp47	tail	F6MIL6	Haemophilus_phage	63.7	1.4e-122
SQI76695.1|1303303_1303900_+	Uncharacterized protein conserved in bacteria (DUF2313)	NA	F6MIL7	Haemophilus_phage	63.5	6.0e-67
SQI76699.1|1303903_1305301_+|tail	Probable phage tail-fiber protein	tail	Q94MY0	Haemophilus_virus	78.7	2.2e-168
SQI76702.1|1305349_1306015_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	65.0	3.9e-67
SQI76704.1|1306026_1306629_+	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	88.5	1.2e-91
SQI76709.1|1306625_1307126_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	63.5	3.1e-53
SQI76712.1|1307301_1307430_+	mu com-like protein	NA	NA	NA	NA	NA
SQI76716.1|1307496_1308033_+	Protein of uncharacterised function, DUF462	NA	NA	NA	NA	NA
SQI76718.1|1308231_1308444_+	pyruvate kinase	NA	NA	NA	NA	NA
SQI76720.1|1308550_1309636_+	peptide chain release factor RF-1	NA	G0YKC3	Acinetobacter_phage	52.8	6.3e-06
SQI76723.1|1309688_1310129_+	RDD family	NA	NA	NA	NA	NA
SQI76724.1|1310128_1311007_+	N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2	NA	NA	NA	NA	NA
SQI76727.1|1311006_1311810_+	putative transcriptional regulator	NA	NA	NA	NA	NA
SQI76729.1|1311824_1312679_+	3-deoxy-D-manno-octulosonate 8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	38.5	1.9e-45
SQI76731.1|1312738_1313686_+	putative 2-hydroxyacid dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	31.1	6.6e-28
SQI76733.1|1313685_1314867_+	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
SQI76735.1|1314878_1316171_+	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	NA	NA	NA	NA
SQI76737.1|1316179_1317322_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
SQI76739.1|1317331_1317979_+	dithiobiotin synthetase	NA	NA	NA	NA	NA
SQI76742.1|1317966_1318749_+	putative biotin synthesis protein BioC	NA	NA	NA	NA	NA
SQI76744.1|1318758_1319400_+	dethiobiotin synthetase 2	NA	NA	NA	NA	NA
SQI76769.1|1319481_1320165_+	outer membrane-specific lipoprotein transporter subunit	NA	G9BWD6	Planktothrix_phage	40.1	5.6e-37
SQI76773.1|1320164_1321415_+	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
SQI76778.1|1321632_1322721_+	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	NA	A0A0B6VT43	Edwardsiella_phage	46.9	7.8e-81
SQI76785.1|1322790_1323231_-	protein ImpA	NA	NA	NA	NA	NA
SQI76801.1|1323515_1324760_+	sodium:serine/threonine symporter	NA	NA	NA	NA	NA
SQI76803.1|1324880_1325489_+	NAD(P)H oxidoreductase	NA	NA	NA	NA	NA
1325454:1325472	attR	GCAAAATTGACCGCACTTT	NA	NA	NA	NA
SQI76806.1|1325488_1326043_+	component of anaerobic dehydrogenase	NA	NA	NA	NA	NA
SQI76807.1|1326089_1326644_-	oxidoreductase	NA	NA	NA	NA	NA
SQI76808.1|1326741_1328589_+|protease	protease iv (signal peptide peptidase)	protease	A0A2I6UG67	Salinibacter_virus	28.9	3.0e-16
SQI76810.1|1328626_1329433_-|holin	phosphorylcholine transferase	holin	A0A1V0SD50	Indivirus	46.7	1.0e-05
>prophage 4
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	1395060	1427149	1890469	holin,tail,terminase,plate	Haemophilus_phage(47.83%)	50	NA	NA
SQI77199.1|1395060_1395234_+	Uncharacterized conserved protein	NA	A0A2P1N580	Mycobacterium_phage	62.5	6.8e-08
SQI77203.1|1395726_1396542_-	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA	NA
SQI77209.1|1396538_1397246_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI77214.1|1397345_1398011_-	prophage repressor	NA	A0A1I9KG86	Aeromonas_phage	43.8	1.6e-41
SQI77219.1|1398111_1398351_+	regulatory protein	NA	A0A2I6PIE5	Escherichia_phage	49.2	7.0e-11
SQI77224.1|1398377_1398674_+	phage aaphi23	NA	Q7Y5W3	Haemophilus_phage	70.4	1.5e-31
SQI77228.1|1398726_1398894_-	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	85.2	6.4e-19
SQI77234.1|1399235_1399856_+	Probable phage repressor protein	NA	A0A2I7R827	Vibrio_phage	54.1	5.1e-53
SQI77236.1|1399852_1400575_+	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	67.8	1.3e-63
SQI77238.1|1400571_1401198_+	Replication protein P	NA	A0A0M3LS65	Mannheimia_phage	37.5	8.8e-29
SQI77240.1|1401194_1401419_+	Uncharacterised protein	NA	A0A0M3LR43	Mannheimia_phage	47.9	1.1e-10
SQI77241.1|1401455_1401872_+	putative phage recombination protein ninb	NA	Q7Y5V7	Haemophilus_phage	82.4	9.3e-59
SQI77242.1|1401951_1402155_+	P-43	NA	NA	NA	NA	NA
SQI77245.1|1402157_1402712_+	ning recombination protein	NA	D0UIK8	Aggregatibacter_phage	71.3	7.0e-62
SQI77246.1|1402713_1403082_+	putative phage anti-termination protein Q	NA	Q7Y5V5	Haemophilus_phage	62.6	3.0e-37
SQI77247.1|1403113_1403407_-	putative transcriptional regulator/addiction module antitoxin	NA	A4JWV1	Burkholderia_virus	45.5	3.2e-13
SQI77253.1|1403403_1403709_-	addiction module killer protein	NA	A0A141GEX6	Brucella_phage	44.2	1.4e-19
SQI77259.1|1404070_1404748_+	Putative prophage antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	48.6	1.9e-61
SQI77262.1|1405083_1405440_+|holin	Putative bacteriophage holin protein	holin	NA	NA	NA	NA
SQI77267.1|1405520_1406012_+	Putative phage lysozyme	NA	Q7Y5V0	Haemophilus_phage	56.7	3.0e-48
SQI77273.1|1406004_1406328_+	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	55.6	1.7e-20
SQI77278.1|1406522_1406870_-	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	56.1	3.4e-22
SQI77283.1|1406853_1407105_-	bacteriophage protein/plasmid stabilization system protein	NA	A0A1S5NR91	Burkholderia_phage	51.8	6.4e-15
SQI77295.1|1407181_1407694_+|terminase	Probable bacteriophage terminase, small subunit	terminase	A0A1X9SFE5	Acinetobacter_phage	39.2	1.0e-19
SQI77300.1|1407680_1409024_+|terminase	phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	53.2	1.2e-123
SQI77302.1|1409025_1410357_+	phage-associated protein, HI1409 family	NA	Q7Y5U6	Haemophilus_phage	84.7	3.0e-212
SQI77307.1|1410385_1411819_+	plasmid RP4 TraN-like protein	NA	Q7Y5U5	Haemophilus_phage	76.7	6.6e-88
SQI77332.1|1411908_1412865_+	Uncharacterized protein conserved in bacteria	NA	Q7Y5U2	Haemophilus_phage	84.1	5.9e-117
SQI77342.1|1413021_1413462_+	Uncharacterised protein	NA	D0UIJ1	Aggregatibacter_phage	71.1	1.3e-47
SQI77344.1|1413471_1414386_+	Uncharacterized protein conserved in bacteria	NA	Q7Y5U0	Haemophilus_phage	90.5	2.1e-151
SQI77351.1|1414395_1414758_+	Uncharacterised protein	NA	Q7Y5T9	Haemophilus_phage	67.2	1.8e-34
SQI77353.1|1414758_1415070_+	Uncharacterised protein	NA	Q7Y5T8	Haemophilus_phage	66.0	1.5e-32
SQI77356.1|1415201_1415573_+	Uncharacterised protein	NA	Q776V7	Haemophilus_phage	70.7	5.2e-45
SQI77359.1|1416003_1417512_+	phage-like protein	NA	Q7Y5T5	Haemophilus_phage	87.1	3.3e-247
SQI77362.1|1417562_1417934_+	Uncharacterised protein	NA	Q7Y5T4	Haemophilus_phage	92.9	4.0e-45
SQI77365.1|1417962_1418373_+	Protein of uncharacterised function (DUF2669)	NA	Q776V6	Haemophilus_phage	72.9	3.5e-50
SQI77367.1|1418523_1420614_+	Uncharacterised protein	NA	Q7Y5T2	Haemophilus_phage	70.6	1.4e-219
SQI77373.1|1420619_1421396_+	Uncharacterised protein	NA	Q7Y5T0	Haemophilus_phage	68.9	1.3e-85
SQI77374.1|1421389_1421710_+	Uncharacterised protein	NA	D0UII0	Aggregatibacter_phage	80.4	2.6e-45
SQI77375.1|1421792_1421972_+	Uncharacterised protein	NA	D0UIH9	Aggregatibacter_phage	94.9	1.9e-21
SQI77376.1|1421986_1422859_+	Phage protein D	NA	D0UIH8	Aggregatibacter_phage	86.6	4.5e-140
SQI77377.1|1422855_1423500_+|plate	phage baseplate assembly protein V	plate	D0UIH7	Aggregatibacter_phage	79.4	3.6e-94
SQI77380.1|1423496_1423850_+	Uncharacterised protein	NA	Q7Y5S5	Haemophilus_phage	88.5	2.4e-55
SQI77381.1|1423945_1424047_+	Uncharacterised protein	NA	Q7Y5S4	Haemophilus_phage	81.2	2.6e-07
SQI77385.1|1424030_1424528_+	Uncharacterized homolog of phage Mu protein gp47	NA	Q7Y5S4	Haemophilus_phage	88.4	2.6e-76
SQI77387.1|1424579_1425089_+	Uncharacterized homolog of phage Mu protein gp47	NA	D0UIH5	Aggregatibacter_phage	82.2	1.9e-74
SQI77390.1|1425088_1425664_+	Protein of uncharacterised function (DUF2612)	NA	D0UIH4	Aggregatibacter_phage	79.1	2.0e-88
SQI77402.1|1425673_1425784_+|tail	tail fiber protein	tail	Q7Y5S2	Haemophilus_phage	93.9	1.4e-11
SQI77405.1|1425734_1426916_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	41.3	4.4e-45
SQI77407.1|1426915_1427149_+|tail	putative tail fiber assembly protein	tail	Q7Y5S1	Haemophilus_phage	63.5	2.4e-16
>prophage 5
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	1462265	1526183	1890469	bacteriocin,protease,tRNA	Escherichia_phage(16.67%)	52	NA	NA
SQI77538.1|1462265_1463207_+|tRNA	C32 tRNA thiolase	tRNA	A0A0U2S5Z2	Escherichia_phage	82.3	7.8e-122
SQI77540.1|1463208_1463538_+|tRNA	tRNA 2-thiouridine synthesizing protein E	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	54.3	4.1e-25
SQI77542.1|1463645_1463855_+	molybdenum-pterin binding protein	NA	NA	NA	NA	NA
SQI77544.1|1464014_1466417_+	Probable TonB-dependent transport protein	NA	NA	NA	NA	NA
SQI77553.1|1466519_1469300_+|protease	putative zinc protease	protease	NA	NA	NA	NA
SQI77556.1|1469422_1471354_-|tRNA	threonyl-tRNA synthetase	tRNA	A0A2K9L297	Tupanvirus	38.9	3.5e-132
SQI77559.1|1471638_1472223_+	NADH-azoreductase, FMN-dependent	NA	NA	NA	NA	NA
SQI77562.1|1472294_1474901_-	DNA topoisomerase I subunit omega	NA	A0A1V0SB35	Catovirus	34.5	1.1e-88
SQI77570.1|1474996_1475914_+	HTH-type transcriptional regulator	NA	NA	NA	NA	NA
SQI77576.1|1475975_1477400_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
SQI77582.1|1477410_1478949_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
SQI77592.1|1479209_1481675_-	glycogen phosphorylase	NA	A0A140XAG6	Dickeya_phage	54.2	5.0e-19
SQI77594.1|1481920_1483351_-	glycogen synthase	NA	NA	NA	NA	NA
SQI77595.1|1483457_1484759_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
SQI77596.1|1484781_1486758_-	glycogen operon protein	NA	NA	NA	NA	NA
SQI77597.1|1486856_1489049_-	glycogen branching enzyme	NA	NA	NA	NA	NA
SQI77598.1|1489058_1491149_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
SQI77599.1|1491219_1491672_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQI77600.1|1491749_1493423_-|tRNA	glutamyl-tRNA synthetase	tRNA	A0A222YZ70	Escherichia_phage	76.8	9.9e-253
SQI77602.1|1493976_1495452_-	ribonuclease G	NA	NA	NA	NA	NA
SQI77603.1|1495567_1497082_+	sodium/proline symporter	NA	NA	NA	NA	NA
SQI77604.1|1497078_1498044_+	S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA	NA
SQI77605.1|1498086_1498965_-	cytidine/deoxycytidine deaminase	NA	NA	NA	NA	NA
SQI77606.1|1499238_1499721_+	DNA-binding ferritin-like protein	NA	NA	NA	NA	NA
SQI77607.1|1500188_1501427_-	peptidase T	NA	NA	NA	NA	NA
SQI77616.1|1501695_1502841_+	Spermidine/putrescine ABC transporter, ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.1	1.9e-29
SQI77624.1|1502824_1503685_+	polyamine transporter subunit	NA	Q6GZ02	Mycoplasma_phage	28.2	7.6e-15
SQI77627.1|1503684_1504455_+	polyamine transporter subunit	NA	NA	NA	NA	NA
SQI77631.1|1504527_1505667_+	spermidine/putrescine-binding periplasmic protein 1	NA	NA	NA	NA	NA
SQI77632.1|1505910_1506162_-	ISMha3, family IS1595	NA	NA	NA	NA	NA
SQI77636.1|1506848_1507703_+	hemocin processing protein D (pseudogene)	NA	NA	NA	NA	NA
SQI77639.1|1507665_1508262_+|bacteriocin	hemocin bacteriocin c	bacteriocin	NA	NA	NA	NA
SQI77643.1|1508264_1508972_+|bacteriocin	hemocin bacteriocin b	bacteriocin	NA	NA	NA	NA
SQI77646.1|1508998_1509271_+|bacteriocin	hemocin bacteriocin a	bacteriocin	NA	NA	NA	NA
SQI77656.1|1509276_1509636_+	hemocin immunity protein	NA	NA	NA	NA	NA
SQI77658.1|1509998_1511288_-	sugar ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	25.8	1.1e-20
SQI77659.1|1511325_1512255_+	selenocysteine lyase	NA	Q2XUY6	environmental_halophage	32.5	2.7e-42
SQI77660.1|1512251_1512632_+	SufE protein probably involved in Fe-S center assembly	NA	NA	NA	NA	NA
SQI77662.1|1512622_1513408_+	Zn-ribbon-containing protein	NA	NA	NA	NA	NA
SQI77665.1|1513462_1514788_+	outer membrane efflux protein	NA	A0A2I7SAX1	Vibrio_phage	36.9	6.9e-23
SQI77668.1|1514865_1515276_-	Late embryogenesis abundant protein	NA	NA	NA	NA	NA
SQI77671.1|1515488_1515983_-	phosphohistidine phosphatase SixA-like protein	NA	NA	NA	NA	NA
SQI77675.1|1516041_1516566_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
SQI77678.1|1516717_1518625_-|protease	protease, ATP-dependent zinc-metallo	protease	M4QMW8	Micromonas_pusilla_virus	42.3	8.4e-115
SQI77691.1|1518716_1519346_-	ribosomal RNA large subunit methyltransferase J	NA	NA	NA	NA	NA
SQI77695.1|1519472_1519772_+	23S rRNA methyltransferase J	NA	NA	NA	NA	NA
SQI77700.1|1519811_1520288_-	transcription elongation factor greA	NA	NA	NA	NA	NA
SQI77704.1|1520451_1521891_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
SQI77708.1|1522610_1522748_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI77713.1|1522744_1523470_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
SQI77714.1|1523705_1524239_-	beta-hydroxydecanoyl thioester dehydrase	NA	NA	NA	NA	NA
SQI77719.1|1524407_1526183_-|protease	protease La	protease	NA	NA	NA	NA
>prophage 6
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	1685791	1694305	1890469		uncultured_Caudovirales_phage(16.67%)	8	NA	NA
SQI78237.1|1685791_1686475_+	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.2	3.9e-54
SQI78238.1|1686467_1686893_+	6-pyruvoyl-tetrahydropterin synthase	NA	A0A1U9WRB3	Streptococcus_virus	42.7	7.8e-21
SQI78250.1|1686899_1687529_+	organic radical activating protein	NA	S4TZT1	uncultured_phage	30.3	8.6e-16
SQI78256.1|1688140_1690324_+	DNA-dependent ATPase I and helicase II	NA	A7KV33	Bacillus_phage	37.6	1.5e-115
SQI78258.1|1690413_1691415_+	dipeptide transporter	NA	NA	NA	NA	NA
SQI78260.1|1691429_1692317_+	dipeptide transporter	NA	NA	NA	NA	NA
SQI78262.1|1692326_1693319_+	dipeptide transporter	NA	G3M9Y6	Bacillus_virus	30.8	2.0e-14
SQI78264.1|1693321_1694305_+	dipeptide transporter	NA	G9BWD6	Planktothrix_phage	32.8	1.8e-20
>prophage 7
LS483480	Haemophilus influenzae strain NCTC13377 genome assembly, chromosome: 1	1890469	1824933	1834002	1890469		Escherichia_phage(83.33%)	9	NA	NA
SQI78764.1|1824933_1826778_+	abc transporter atp-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.6	1.6e-22
SQI78766.1|1826902_1827181_-	copper chaperone MerP-like protein	NA	NA	NA	NA	NA
SQI78771.1|1827189_1827552_-	putative mercuric transport protein MerT	NA	NA	NA	NA	NA
SQI78772.1|1827526_1828636_-	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
SQI78773.1|1828889_1831310_+	dimethyl sulfoxide reductase, anaerobic subunit A	NA	A0A077SK27	Escherichia_phage	50.4	1.4e-223
SQI78774.1|1831320_1831938_+	oxidoreductase, Fe-S subunit	NA	A0A077SL61	Escherichia_phage	56.8	2.2e-72
SQI78775.1|1831939_1832779_+	oxidoreductase, membrane subunit	NA	A0A077SK59	Escherichia_phage	31.4	7.2e-18
SQI78833.1|1832890_1833502_+	twin-argninine leader-binding protein for DmsA and TorA	NA	A0A077SLS7	Escherichia_phage	32.5	1.0e-21
SQI78834.1|1833501_1834002_+	ferredoxin	NA	A0A077SLP0	Escherichia_phage	32.0	3.2e-13
