The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483485	Aggregatibacter aphrophilus strain NCTC11096 genome assembly, chromosome: 1	2290909	96115	106155	2290909	integrase	Serratia_phage(16.67%)	8	96041:96057	108738:108754
96041:96057	attL	AAAACGACCGCACTTTT	NA	NA	NA	NA
SQI92235.1|96115_98131_+	DNA ligase	NA	A0A289ZTZ3	Serratia_phage	49.4	1.3e-142
SQI92236.1|98316_98895_-	Thymidine kinase	NA	A0A076YPF1	Citrobacter_phage	51.6	5.2e-52
SQI92237.1|98897_99131_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI92238.1|99202_100231_-	t(6)A37 threonylcarbamoyladenosine biosynthesis protein	NA	A0A0R6PI74	Moraxella_phage	58.3	1.2e-110
SQI92239.1|100455_100671_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
SQI92254.1|100793_102572_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	31.6	5.6e-44
SQI92257.1|102643_104515_+	Sigma-70	NA	A0A2I7SAT0	Vibrio_phage	33.5	1.0e-35
SQI92263.1|104913_106155_+|integrase	Prophage CP4-57 integrase	integrase	A0A1B5FPC6	Escherichia_phage	38.0	8.3e-71
108738:108754	attR	AAAACGACCGCACTTTT	NA	NA	NA	NA
>prophage 2
LS483485	Aggregatibacter aphrophilus strain NCTC11096 genome assembly, chromosome: 1	2290909	1466805	1492402	2290909	portal,capsid,head,tRNA,integrase,protease,tail,terminase	uncultured_Caudovirales_phage(53.85%)	34	1472211:1472232	1504542:1504563
SQI98438.1|1466805_1468746_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.8	1.7e-115
SQI98439.1|1468834_1469365_+	Protein of uncharacterised function, DUF462	NA	NA	NA	NA	NA
SQI98440.1|1469441_1470281_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	A0A2I7SAX1	Vibrio_phage	37.0	9.0e-37
SQI98441.1|1470289_1471072_-	Zn-ribbon-containing, possibly nucleic-acid-binding protein	NA	NA	NA	NA	NA
SQI98442.1|1471179_1471497_+	Domain of uncharacterised function, DUF446	NA	NA	NA	NA	NA
SQI98443.1|1471490_1472201_+|tRNA	tRNA pseudouridine synthase C	tRNA	NA	NA	NA	NA
1472211:1472232	attL	AAAAAAACGACCGCACTTTTTA	NA	NA	NA	NA
SQI98444.1|1472254_1472416_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI98445.1|1472625_1472835_+	Cold shock-like protein CspD	NA	A0A1J0GVA5	Vibrio_phage	53.1	2.1e-11
SQI98446.1|1472900_1473347_-	Macrodomain Ter protein	NA	NA	NA	NA	NA
SQI98447.1|1473482_1475258_+|protease	ATP-dependent protease Lon	protease	NA	NA	NA	NA
SQI98448.1|1475399_1475930_+	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA	NA
SQI98449.1|1476384_1477581_+|integrase	Prophage CP4-57 integrase	integrase	A0A1V0E8G8	Vibrio_phage	38.0	2.2e-76
SQI98450.1|1477745_1479536_-	phage/plasmid primase, P4 family, C-terminal domain	NA	Q7M2A8	Enterobacteria_phage	38.1	4.3e-76
SQI98451.1|1479519_1479963_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98452.1|1479962_1480277_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98453.1|1480276_1480486_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98454.1|1480482_1480686_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98455.1|1480678_1480909_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98456.1|1480901_1481117_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98457.1|1481121_1481544_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98458.1|1481742_1482054_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98459.1|1482065_1482269_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
SQI98460.1|1482455_1483427_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98461.1|1483521_1483884_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98462.1|1483977_1484262_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI98463.1|1484258_1485926_-|terminase	Phage terminase-like protein, large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	71.6	3.4e-245
SQI98464.1|1485932_1486301_-|terminase	Phage terminase, small subunit	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	64.3	1.7e-35
SQI98465.1|1486403_1486766_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	53.6	1.1e-28
SQI98466.1|1486780_1487095_-	uncharacterized phage protein (possible DNA packaging)	NA	A0A2H4JD08	uncultured_Caudovirales_phage	49.5	2.7e-18
SQI98467.1|1487081_1487426_-|head,tail	Bacteriophage head-tail adaptor	head,tail	NA	NA	NA	NA
SQI98468.1|1487409_1488642_-|portal	phage portal protein, HK97 family	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	62.3	4.7e-143
SQI98469.1|1488643_1489210_-|head,protease	phage prohead protease, HK97 family	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	64.6	9.7e-51
SQI98470.1|1489263_1490451_-|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	63.0	6.8e-131
SQI98471.1|1491091_1492402_+	Probable adenine permease PurP	NA	A0A0R6PHV4	Moraxella_phage	36.3	2.9e-66
1504542:1504563	attR	TAAAAAGTGCGGTCGTTTTTTT	NA	NA	NA	NA
