The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483470	Leminorella richardii strain NCTC12151 genome assembly, chromosome: 1	3976274	297611	331440	3976274	tail,head,transposase,tRNA	Shigella_phage(40.0%)	45	NA	NA
SQI34893.1|297611_298616_+|tRNA	Tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
SQI34896.1|298693_299302_-	Protein tyrosine/serine phosphatase	NA	NA	NA	NA	NA
SQI34899.1|299448_300699_+	Cytosine permease	NA	NA	NA	NA	NA
SQI34902.1|300688_301558_+	Cytosine deaminase	NA	NA	NA	NA	NA
SQI34904.1|301688_301853_-	Uncharacterised protein	NA	A0A2H4J924	uncultured_Caudovirales_phage	49.0	3.6e-06
SQI34907.1|301865_302711_-	Uncharacterised protein	NA	A0A0C4UQS2	Shigella_phage	52.6	7.5e-15
SQI34910.1|302714_303299_-	Uncharacterized protein conserved in bacteria (DUF2313)	NA	M4M9M8	Vibrio_phage	32.6	1.0e-23
SQI34913.1|303289_304321_-	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0C4UQU9	Shigella_phage	41.3	3.7e-64
SQI34916.1|304354_304777_-	Phage protein GP46	NA	A0A0C4UR04	Shigella_phage	49.3	2.4e-30
SQI34919.1|304773_305322_-	Mu-like prophage protein gp45	NA	A0A0C4UQZ3	Shigella_phage	45.0	4.0e-33
SQI34921.1|305321_306392_-|tail	Mu-like prophage tail protein gpP	tail	C9DGQ3	Escherichia_phage	39.0	1.6e-70
SQI34923.1|306381_307719_-	Mu-like prophage DNA circulation protein	NA	A0A0C4UR32	Shigella_phage	25.0	1.3e-21
SQI34932.1|307718_308150_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34934.1|308218_309502_-	Uncharacterised protein	NA	M4MHE6	Vibrio_phage	26.1	1.0e-31
SQI34936.1|309628_309970_-	Mu-like prophage FluMu protein gp41	NA	C9DGP9	Escherichia_phage	40.5	3.7e-13
SQI34938.1|309966_310329_-|tail	Phage tail tube protein	tail	C9DGP8	Escherichia_phage	35.8	1.0e-13
SQI34940.1|310339_311806_-|tail	Mu-like prophage tail sheath protein gpL	tail	C9DGP7	Escherichia_phage	48.8	3.3e-127
SQI34942.1|311802_312000_-	Protein of uncharacterised function (DUF2635)	NA	NA	NA	NA	NA
SQI34944.1|311996_312548_-	Mu-like prophage protein gp37	NA	A0A0C4UQU7	Shigella_phage	30.5	1.9e-19
SQI34947.1|312547_312991_-	Mu-like prophage protein gp36	NA	NA	NA	NA	NA
SQI34948.1|312990_313545_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34949.1|313615_314497_-|head	Mu-like prophage major head subunit gpT	head	J9SVY7	Pseudomonas_phage	44.1	1.4e-67
SQI34950.1|314504_315749_-	Mu-like prophage I protein	NA	A0A0C4UQU6	Shigella_phage	39.3	1.2e-56
SQI34951.1|315917_316385_-	Mu-like prophage protein gpG	NA	A0A2P9JZJ5	Alteromonadaceae_phage	31.8	5.2e-10
SQI34952.1|316520_317846_-|head	phage head morphogenesis protein, SPP1 gp7 family	head	A0A0C4UQY9	Shigella_phage	49.2	5.5e-121
SQI34953.1|317812_319414_-	Mu-like prophage protein gp29	NA	A0A0C4UQR8	Shigella_phage	47.6	1.9e-131
SQI34954.1|319413_321012_-	Mu-like prophage FluMu protein gp28	NA	A0A2I7S9C5	Vibrio_phage	56.1	8.3e-148
SQI34955.1|321011_321584_-	Protein of uncharacterised function (DUF3486)	NA	M4MCR3	Vibrio_phage	55.2	4.1e-49
SQI34956.1|321576_321873_-	Uncharacterised protein	NA	A0A2I7S9D8	Vibrio_phage	62.1	4.8e-25
SQI34957.1|321872_322175_-	Protein of uncharacterised function (DUF2730)	NA	NA	NA	NA	NA
SQI34958.1|322385_322988_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34959.1|322980_323214_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34960.1|323198_323474_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34961.1|323458_323971_-	Predicted lysozyme (DUF847)	NA	A0A2I7S9B9	Vibrio_phage	45.3	1.3e-33
SQI34966.1|324126_324549_-	Uncharacterized conserved protein	NA	A0A0C4UQZ9	Shigella_phage	43.9	4.9e-23
SQI34972.1|324541_325078_-	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	44.9	1.2e-31
SQI34974.1|325074_325839_-	Mu-like prophage protein gp16	NA	A0A0C4UQU3	Shigella_phage	37.4	9.1e-28
SQI34979.1|325831_325927_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34983.1|325923_326397_-	restriction alleviation protein, Lar family	NA	K7ZRM8	Xanthomonas_citri_phage	48.1	9.7e-12
SQI34986.1|326393_326855_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34995.1|326952_327216_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI35001.1|327427_328366_-	Predicted ATPase	NA	A0A0C4UQR3	Shigella_phage	49.2	7.2e-75
SQI35013.1|328380_330459_-|transposase	Mu transposase, C-terminal	transposase	A0A2D1GNK9	Pseudomonas_phage	51.7	2.5e-184
SQI35016.1|330458_330707_-	DNA-binding transcriptional regulator Nlp	NA	A0A2D1GNH1	Pseudomonas_phage	69.3	4.0e-25
SQI35020.1|330870_331440_+	Uncharacterised protein	NA	A0A2D1GNR8	Pseudomonas_phage	51.4	7.2e-38
>prophage 2
LS483470	Leminorella richardii strain NCTC12151 genome assembly, chromosome: 1	3976274	1445128	1458269	3976274	tRNA	Escherichia_phage(50.0%)	10	NA	NA
SQI39587.1|1445128_1446472_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	41.3	8.7e-82
SQI39590.1|1446575_1447868_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.3	2.5e-94
SQI39593.1|1448519_1450955_+	Dimethyl sulfoxide reductase DmsA precursor	NA	A0A077SK27	Escherichia_phage	50.2	1.3e-216
SQI39597.1|1450965_1451583_+	DMSO reductase iron-sulfur subunit	NA	A0A077SL61	Escherichia_phage	61.1	2.4e-79
SQI39600.1|1451584_1452439_+	DMSO reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	33.8	1.9e-26
SQI39603.1|1452535_1453177_+	Twin-arginine leader-binding protein DmsD	NA	A0A077SLS7	Escherichia_phage	34.0	3.3e-23
SQI39606.1|1453302_1454451_+	Uncharacterized MFS-type transporter ycaD	NA	NA	NA	NA	NA
SQI39610.1|1454525_1455026_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39614.1|1455055_1455796_-	Pyruvate formate-lyase 1-activating enzyme	NA	A0A2P0VNQ0	Tetraselmis_virus	28.0	1.7e-23
SQI39616.1|1455986_1458269_-	Formate acetyltransferase 1	NA	A0A2P0VNR5	Tetraselmis_virus	41.6	3.5e-160
>prophage 3
LS483470	Leminorella richardii strain NCTC12151 genome assembly, chromosome: 1	3976274	2664950	2678294	3976274	tail	Erwinia_phage(50.0%)	18	NA	NA
SQI42306.1|2664950_2665520_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	73.3	5.5e-70
SQI42308.1|2665975_2666401_+|tail	Caudovirales tail fibre assembly protein	tail	F1BUP0	Erwinia_phage	42.3	9.6e-11
SQI42309.1|2666564_2666816_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI42311.1|2666817_2667447_-|tail	Phage tail fibre repeat	tail	NA	NA	NA	NA
SQI42313.1|2667616_2668630_-|tail	Phage tail fibre repeat	tail	A0A0K2FIZ6	Escherichia_phage	44.4	3.6e-32
SQI42314.1|2668741_2669335_-|tail	Bacteriophage tail assembly protein	tail	M1SV83	Escherichia_phage	38.9	6.0e-35
SQI42316.1|2669334_2670036_-	Phage Tail Collar Domain	NA	A0A0F7LCR3	Escherichia_phage	46.1	8.1e-31
SQI42318.1|2670032_2670773_-	Protein of uncharacterised function (DUF2612)	NA	R9UB47	Vibrio_phage	31.0	4.9e-10
SQI42319.1|2670769_2672191_-	Uncharacterized homolog of phage Mu protein gp47	NA	I3PGV8	Xanthomonas_phage	34.1	4.3e-55
SQI42321.1|2672190_2672544_-	Uncharacterised protein	NA	E5AGC2	Erwinia_phage	57.5	1.1e-31
SQI42323.1|2672540_2673206_-	Mu-like prophage protein gp45	NA	E5AGC1	Erwinia_phage	47.5	3.7e-49
SQI42325.1|2673215_2674157_-	Uncharacterised protein	NA	E5AGC0	Erwinia_phage	39.6	2.5e-59
SQI42327.1|2674224_2674548_-	Uncharacterised protein	NA	E5AGB9	Erwinia_phage	43.5	1.4e-17
SQI42328.1|2674566_2675250_-	Uncharacterised protein	NA	E5AGB8	Erwinia_phage	33.2	1.9e-21
SQI42330.1|2675249_2677142_-	tape measure domain	NA	NA	NA	NA	NA
SQI42332.1|2677138_2677270_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI42333.1|2677338_2677752_-	Uncharacterised protein	NA	I3PGV1	Xanthomonas_phage	36.9	1.5e-16
SQI42335.1|2677856_2678294_-	Protein of uncharacterised function (DUF3277)	NA	E5AGB5	Erwinia_phage	51.4	1.9e-38
