assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900478015.1_48269_B01	LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	1	277985-278080	1	CRISPRCasFinder	no		csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	Orphan	GCTTTATATTAATTAAGTTTGATTCATATG	30	0	0	NA	NA	NA	1	1	Orphan	csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	NA|66aa|up_5|LS483461.1_265335_265533_+,NA|219aa|up_2|LS483461.1_268707_269364_+,NA|194aa|down_0|LS483461.1_278316_278898_+,NA|76aa|down_3|LS483461.1_282936_283164_+,NA|294aa|down_4|LS483461.1_283303_284185_+,NA|733aa|down_5|LS483461.1_284212_286411_+,NA|257aa|down_6|LS483461.1_286892_287663_+	NA|248aa|up_9|LS483461.1_262100_262844_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|104aa|up_8|LS483461.1_262843_263155_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|257aa|up_7|LS483461.1_263138_263909_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|286aa|up_6|LS483461.1_263923_264781_+	PRK13636, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|66aa|up_5|LS483461.1_265335_265533_+	NA	NA|288aa|up_4|LS483461.1_265736_266600_-	TIGR01533, Lipoprotein_E, 5'-nucleotidase, lipoprotein e(P4) family	NA|400aa|up_3|LS483461.1_266822_268022_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|219aa|up_2|LS483461.1_268707_269364_+	NA	NA|210aa|up_1|LS483461.1_275294_275924_+	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	NA|90aa|up_0|LS483461.1_276465_276735_+	cd10159, CsoR-like_DUF156_2, Uncharacterized family 2; belongs to a superfamily containing transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this family was previously known as part of DUF156	NA|194aa|down_0|LS483461.1_278316_278898_+	NA	NA|792aa|down_1|LS483461.1_279035_281411_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|353aa|down_2|LS483461.1_281777_282836_+	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|76aa|down_3|LS483461.1_282936_283164_+	NA	NA|294aa|down_4|LS483461.1_283303_284185_+	NA	NA|733aa|down_5|LS483461.1_284212_286411_+	NA	NA|257aa|down_6|LS483461.1_286892_287663_+	NA	NA|272aa|down_7|LS483461.1_287841_288657_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|215aa|down_8|LS483461.1_289230_289875_-	cd19165, HemeO, heme oxygenase in eukaryotes and some bacteria	NA|408aa|down_9|LS483461.1_290275_291499_+	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]
GCA_900478015.1_48269_B01	LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	2	341447-341535	2	CRISPRCasFinder	no		csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	Orphan	AGTTTTATATAAATCAATATAAA	23	0	0	NA	NA	NA	1	1	Orphan	csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	NA|62aa|up_9|LS483461.1_334384_334570_+,NA|110aa|up_7|LS483461.1_334915_335245_-,NA|71aa|up_2|LS483461.1_339200_339413_+,NA|99aa|up_0|LS483461.1_341068_341365_-,NA|100aa|down_2|LS483461.1_342785_343085_+	NA|62aa|up_9|LS483461.1_334384_334570_+	NA	NA|83aa|up_8|LS483461.1_334582_334831_+	pfam07875, Coat_F, Coat F domain	NA|110aa|up_7|LS483461.1_334915_335245_-	NA	NA|244aa|up_6|LS483461.1_335366_336098_-	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional	NA|169aa|up_5|LS483461.1_336390_336897_+	COG1329, COG1329, Transcriptional regulators, similar to M	NA|379aa|up_4|LS483461.1_337080_338217_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|208aa|up_3|LS483461.1_338213_338837_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|71aa|up_2|LS483461.1_339200_339413_+	NA	NA|438aa|up_1|LS483461.1_339536_340850_-	pfam07613, DUF1576, Protein of unknown function (DUF1576)	NA|99aa|up_0|LS483461.1_341068_341365_-	NA	NA|226aa|down_0|LS483461.1_341572_342250_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|101aa|down_1|LS483461.1_342486_342789_+	pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain	NA|100aa|down_2|LS483461.1_342785_343085_+	NA	NA|156aa|down_3|LS483461.1_349102_349570_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|249aa|down_4|LS483461.1_350251_350998_+	PRK00059, prsA, peptidylprolyl isomerase; Provisional	NA|271aa|down_5|LS483461.1_351461_352274_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|391aa|down_6|LS483461.1_352291_353464_+	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|428aa|down_7|LS483461.1_353477_354761_+	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins	NA|412aa|down_8|LS483461.1_354779_356015_+	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins	NA|394aa|down_9|LS483461.1_356028_357210_+	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system
GCA_900478015.1_48269_B01	LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3	1160494-1160696	3	CRISPRCasFinder	no		csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	Orphan	TTTTAAGCAATATTTGTTTTTAGGT	25	0	0	NA	NA	NA	3	3	Orphan	csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	NA,NA|104aa|down_1|LS483461.1_1161738_1162050_+,NA|241aa|down_7|LS483461.1_1168365_1169088_+	NA|493aa|up_9|LS483461.1_1152437_1153916_+	TIGR02518, Acetaldehyde_dehydrogenase_acetylating, acetaldehyde dehydrogenase (acetylating)	NA|97aa|up_8|LS483461.1_1154270_1154561_+	cd07059, BMC_PduA, 1,2-propanediol utilization protein A (PduA), Bacterial Micro-Compartment (BMC) domain	NA|272aa|up_7|LS483461.1_1154599_1155415_+	COG4812, EutT, Ethanolamine utilization cobalamin adenosyltransferase [Amino acid transport and metabolism]	NA|212aa|up_6|LS483461.1_1155424_1156060_+	PRK15070, PRK15070, phosphate propanoyltransferase	NA|253aa|up_5|LS483461.1_1156267_1157026_+	TIGR02536, putative_ethanolamine_utilization_protein, ethanolamine utilization protein	NA|91aa|up_4|LS483461.1_1157172_1157445_+	pfam03319, EutN_CcmL, Ethanolamine utilisation protein EutN/carboxysome	NA|185aa|up_3|LS483461.1_1157446_1158001_+	TIGR02526, putative_ethanolamine_utilization_protein, PduT-like ethanolamine utilization protein	NA|366aa|up_2|LS483461.1_1158051_1159149_+	PRK15086, PRK15086, ethanolamine utilization protein EutH; Provisional	NA|158aa|up_1|LS483461.1_1159151_1159625_+	pfam06249, EutQ, Ethanolamine utilisation protein EutQ	NA|162aa|up_0|LS483461.1_1159983_1160469_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|182aa|down_0|LS483461.1_1160901_1161447_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|104aa|down_1|LS483461.1_1161738_1162050_+	NA	NA|547aa|down_2|LS483461.1_1162363_1164004_+	COG2200, Rtn, c-di-GMP phosphodiesterase class I (EAL domain) [Signal    transduction mechanisms]	NA|207aa|down_3|LS483461.1_1164085_1164706_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|142aa|down_4|LS483461.1_1165148_1165574_+	cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase	NA|587aa|down_5|LS483461.1_1165955_1167716_+	PRK08270, PRK08270, ribonucleoside triphosphate reductase	NA|153aa|down_6|LS483461.1_1167712_1168171_+	pfam13353, Fer4_12, 4Fe-4S single cluster domain	NA|241aa|down_7|LS483461.1_1168365_1169088_+	NA	NA|262aa|down_8|LS483461.1_1169661_1170447_-	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|173aa|down_9|LS483461.1_1170654_1171173_+	COG4283, COG4283, Uncharacterized conserved protein [Function unknown]
GCA_900478015.1_48269_B01	LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	4	1179493-1179713	4	CRISPRCasFinder	no		csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	Orphan	GTTAAAAAGATATTATGATAAATTT	25	0	0	NA	NA	NA	3	3	Orphan	csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	NA|244aa|up_4|LS483461.1_1173460_1174192_+,NA|403aa|up_2|LS483461.1_1176328_1177537_+,NA|385aa|down_1|LS483461.1_1181151_1182306_+,NA|104aa|down_2|LS483461.1_1182452_1182764_+,NA|130aa|down_7|LS483461.1_1187368_1187758_-,NA|101aa|down_9|LS483461.1_1188885_1189188_+	NA|262aa|up_9|LS483461.1_1169661_1170447_-	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|173aa|up_8|LS483461.1_1170654_1171173_+	COG4283, COG4283, Uncharacterized conserved protein [Function unknown]	NA|268aa|up_7|LS483461.1_1171209_1172013_+	cd16279, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo	NA|105aa|up_6|LS483461.1_1172068_1172383_+	pfam12650, DUF3784, Domain of unknown function (DUF3784)	NA|243aa|up_5|LS483461.1_1172541_1173270_-	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|244aa|up_4|LS483461.1_1173460_1174192_+	NA	NA|382aa|up_3|LS483461.1_1174405_1175551_-	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|403aa|up_2|LS483461.1_1176328_1177537_+	NA	NA|98aa|up_1|LS483461.1_1177960_1178254_-	PRK12863, PRK12863, YciI-like protein; Reviewed	NA|274aa|up_0|LS483461.1_1178644_1179466_-	pfam02517, Abi, CAAX protease self-immunity	NA|131aa|down_0|LS483461.1_1180430_1180823_+	COG4994, COG4994, Uncharacterized protein conserved in bacteria [Function unknown]	NA|385aa|down_1|LS483461.1_1181151_1182306_+	NA	NA|104aa|down_2|LS483461.1_1182452_1182764_+	NA	NA|588aa|down_3|LS483461.1_1182958_1184722_+	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional	NA|514aa|down_4|LS483461.1_1184725_1186267_+	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|128aa|down_5|LS483461.1_1186292_1186676_+	pfam13630, SdpI, SdpI/YfhL protein family	NA|186aa|down_6|LS483461.1_1186766_1187324_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|130aa|down_7|LS483461.1_1187368_1187758_-	NA	NA|259aa|down_8|LS483461.1_1188059_1188836_+	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|101aa|down_9|LS483461.1_1188885_1189188_+	NA
GCA_900478015.1_48269_B01	LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	5	2316688-2316800	5	CRISPRCasFinder	no		csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	Orphan	TTCTATTTAAATCTATTACTTTACATAA	28	0	0	NA	NA	NA	1	1	Orphan	csx1,DEDDh,cas14j,cas2,csa3,cas3,DinG,c2c9_V-U4	NA,NA|121aa|down_0|LS483461.1_2316870_2317233_-,NA|116aa|down_2|LS483461.1_2318074_2318422_-,NA|147aa|down_3|LS483461.1_2318418_2318859_-,NA|216aa|down_4|LS483461.1_2318818_2319466_-,NA|137aa|down_5|LS483461.1_2319404_2319815_-,NA|97aa|down_6|LS483461.1_2319801_2320092_-	NA|136aa|up_9|LS483461.1_2310487_2310895_-	PRK00202, nusB, transcription antitermination factor NusB	NA|130aa|up_8|LS483461.1_2311013_2311403_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|166aa|up_7|LS483461.1_2311487_2311985_-	pfam12685, SpoIIIAH, SpoIIIAH-like protein	NA|202aa|up_6|LS483461.1_2312010_2312616_-	TIGR02830, Stage_III_sporulation_protein_AG, stage III sporulation protein AG	NA|186aa|up_5|LS483461.1_2312630_2313188_-	TIGR02896, Stage_III_sporulation_protein_AF, stage III sporulation protein AF	NA|391aa|up_4|LS483461.1_2313195_2314368_-	TIGR02829, Stage_III_sporulation_protein_AE, stage III sporulation protein AE	NA|129aa|up_3|LS483461.1_2314378_2314765_-	TIGR02849, Stage_III_sporulation_protein_AD, stage III sporulation protein AD	NA|66aa|up_2|LS483461.1_2314852_2315050_-	TIGR02848, Stage_III_sporulation_protein_AC, stage III sporulation protein AC	NA|172aa|up_1|LS483461.1_2315125_2315641_-	TIGR02833, Stage_III_sporulation_protein_AB, stage III sporulation protein AB	NA|295aa|up_0|LS483461.1_2315787_2316672_-	TIGR02858, Stage_III_sporulation_protein_AA, stage III sporulation protein AA	NA|121aa|down_0|LS483461.1_2316870_2317233_-	NA	NA|186aa|down_1|LS483461.1_2317346_2317904_-	PRK00529, PRK00529, elongation factor P; Validated	NA|116aa|down_2|LS483461.1_2318074_2318422_-	NA	NA|147aa|down_3|LS483461.1_2318418_2318859_-	NA	NA|216aa|down_4|LS483461.1_2318818_2319466_-	NA	NA|137aa|down_5|LS483461.1_2319404_2319815_-	NA	NA|97aa|down_6|LS483461.1_2319801_2320092_-	NA	NA|171aa|down_7|LS483461.1_2320226_2320739_-	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|143aa|down_8|LS483461.1_2320758_2321187_-	PRK10557, PRK10557, prepilin peptidase-dependent protein	NA|340aa|down_9|LS483461.1_2321179_2322199_-	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]
