The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3273517	853235	863421	3273517		Synechococcus_phage(28.57%)	7	NA	NA
SQI03406.1|853235_857036_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.0	1.5e-33
SQI03408.1|857348_857828_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	47.4	2.6e-28
SQI03410.1|857827_858535_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	43.8	2.1e-47
SQI03412.1|858853_860299_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	32.7	3.0e-56
SQI03424.1|860299_861301_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	48.7	1.5e-70
SQI03426.1|861288_861903_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	4.9e-24
SQI03429.1|861915_863421_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.5	8.8e-67
>prophage 2
LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3273517	1050038	1108695	3273517	terminase,tail,portal,coat,head	Clostridium_phage(52.63%)	68	NA	NA
SQI03743.1|1050038_1050506_+|terminase	phage terminase, large subunit	terminase	M9Q2I1	Clostridium_phage	90.9	1.4e-79
SQI03745.1|1051118_1051886_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	40.6	3.4e-38
SQI03746.1|1051875_1053921_+	ABC transporter	NA	NA	NA	NA	NA
SQI03748.1|1054170_1055709_+	glycosyl hydrolase	NA	NA	NA	NA	NA
SQI03749.1|1055959_1056262_-	stress responsive alpha-beta barrel domain-containing protein	NA	NA	NA	NA	NA
SQI03751.1|1056524_1057667_+	class V aminotransferase	NA	NA	NA	NA	NA
SQI03753.1|1057831_1058749_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03773.1|1058953_1059493_+	rubrerythrin	NA	NA	NA	NA	NA
SQI03775.1|1060018_1063087_+	alpha-mannosidase	NA	NA	NA	NA	NA
SQI03776.1|1063343_1063901_-	acetyltransferase	NA	NA	NA	NA	NA
SQI03778.1|1064140_1065313_+	NADH-dependent butanol dehydrogenase	NA	NA	NA	NA	NA
SQI03780.1|1065626_1066688_+	carbohydrate diacid regulator	NA	NA	NA	NA	NA
SQI03782.1|1066833_1068003_+	gluconate permease	NA	NA	NA	NA	NA
SQI03784.1|1068011_1069523_-	resolvase	NA	M9Q2G2	Clostridium_phage	31.1	4.3e-53
SQI03785.1|1069547_1069751_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
SQI03787.1|1070083_1070443_-	DNA-binding protein	NA	NA	NA	NA	NA
SQI03789.1|1070718_1070928_+	DNA-binding protein	NA	NA	NA	NA	NA
SQI03791.1|1070924_1071650_+	BRO domain-containing protein	NA	A0A075KJT3	Lactobacillus_phage	40.8	7.8e-21
SQI03792.1|1071775_1071967_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03794.1|1071960_1072140_+	Uncharacterised protein	NA	M9Q2G4	Clostridium_phage	67.8	2.1e-12
SQI03796.1|1072151_1072700_+	RNA polymerase sigma factor, sigma-70 family	NA	M9Q2I8	Clostridium_phage	54.1	8.5e-44
SQI03797.1|1072804_1073056_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03799.1|1073058_1073301_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03800.1|1073314_1073812_+	Siphovirus Gp157	NA	B6CXH7	Clostridium_phage	41.6	9.5e-26
SQI03802.1|1073821_1074391_+	essential recombination function protein	NA	A0A2H4J7J4	uncultured_Caudovirales_phage	49.7	2.5e-38
SQI03804.1|1074392_1074581_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03805.1|1074598_1075309_+	phage protein	NA	A0A0A7RTY6	Clostridium_phage	59.1	2.5e-32
SQI03808.1|1075309_1075483_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03810.1|1075513_1075984_+	Uncharacterised protein	NA	F8UBI1	Clostridium_phage	34.9	2.2e-16
SQI03811.1|1075984_1076380_+	endodeoxyribonuclease RusA	NA	A0A2K9V3I2	Faecalibacterium_phage	44.0	1.2e-18
SQI03813.1|1076391_1076793_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03815.1|1076806_1078741_+	Uncharacterised protein	NA	A0A142F1B5	Bacillus_phage	27.1	1.1e-16
SQI03817.1|1078760_1078937_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03819.1|1078949_1079411_+	phage protein	NA	A0A0A7RUP7	Clostridium_phage	40.4	1.7e-13
SQI03821.1|1079410_1079614_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03823.1|1079643_1080117_+	probable sigma factor	NA	Q0SPJ6	Clostridium_phage	37.7	2.3e-21
SQI03825.1|1080626_1080809_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03827.1|1080883_1081270_+	YjcQ protein	NA	NA	NA	NA	NA
SQI03829.1|1081299_1082166_+|terminase	phage terminase, small subunit	terminase	E5DV49	Deep-sea_thermophilic_phage	41.6	2.7e-44
SQI03830.1|1082158_1083415_+|terminase	terminase large subunit	terminase	B6CXD2	Clostridium_phage	45.8	7.3e-99
SQI03831.1|1083426_1084881_+|portal	Phage portal protein, SPP1 Gp6-like	portal	A0A1S5SAF3	Streptococcus_phage	55.4	6.4e-139
SQI03833.1|1084873_1085794_+|head	minor head protein	head	D2J057	Enterococcus_phage	41.4	3.7e-60
SQI03834.1|1085806_1085971_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03836.1|1085984_1086230_+	Uncharacterised protein	NA	A0A1S5SCQ9	Streptococcus_phage	50.7	3.0e-09
SQI03837.1|1086345_1086939_+	scaffold protein	NA	A0A0A7S0J5	Clostridium_phage	45.7	5.1e-26
SQI03839.1|1086954_1087791_+|coat	P22 coat protein - gene protein 5	coat	A0A1L2JY55	Aeribacillus_phage	52.2	2.3e-72
SQI03841.1|1087834_1088389_+	Uncharacterised protein	NA	A0A1S5S8X7	Streptococcus_phage	44.9	1.4e-30
SQI03843.1|1088388_1088730_+|head,tail	phage head-tail adaptor	head,tail	NA	NA	NA	NA
SQI03845.1|1088722_1089163_+	Bacteriophage protein of uncharacterised function (DUF646)	NA	A0A1S5SAB8	Streptococcus_phage	58.3	4.4e-35
SQI03847.1|1089171_1089537_+	Uncharacterised protein	NA	A0A1S5SAQ0	Streptococcus_phage	35.7	1.6e-14
SQI03849.1|1089546_1090182_+	Uncharacterised protein	NA	A0A1S5S9Y8	Streptococcus_phage	60.2	2.5e-63
SQI03851.1|1090234_1090612_+	Uncharacterised protein	NA	A0A1S5SAG5	Streptococcus_phage	38.3	4.4e-15
SQI03852.1|1090677_1090887_+	peptide methionine sulfoxide reductase domain-containing protein	NA	NA	NA	NA	NA
SQI03854.1|1090899_1094292_+|tail	TP901 family phage tail tape measure protein	tail	A0A0A7S163	Clostridium_phage	51.4	1.1e-75
SQI03856.1|1094294_1094993_+|tail	tail component family protein	tail	Q0SPL3	Clostridium_phage	45.5	2.7e-42
SQI03857.1|1095020_1095299_+	Uncharacterised protein	NA	Q0SPL4	Clostridium_phage	63.9	2.0e-25
SQI03859.1|1095362_1095587_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03861.1|1095605_1099442_+	phage minor structural protein	NA	M9Q2I5	Clostridium_phage	88.1	3.5e-75
SQI03864.1|1099457_1099754_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI03865.1|1099767_1102404_+	Uncharacterised protein	NA	I2E8W5	Clostridium_phage	56.7	5.9e-167
SQI03867.1|1102422_1102659_+	Uncharacterised protein	NA	I2E8W6	Clostridium_phage	79.5	1.3e-25
SQI03869.1|1102744_1102978_+	Haemolysin XhlA	NA	Q0SPG4	Clostridium_phage	100.0	5.8e-34
SQI03871.1|1102998_1103481_+	phage-like protein	NA	I2E8W8	Clostridium_phage	93.1	1.1e-71
SQI03873.1|1103537_1104566_+	glycosyl hydrolase	NA	Q0SPG7	Clostridium_phage	99.7	2.5e-198
SQI03876.1|1104842_1105355_+	Telomeric repeat-binding factor 2	NA	A0A0S2MVG4	Bacillus_phage	34.9	3.7e-17
SQI03879.1|1105422_1105524_+	gluconate permease	NA	NA	NA	NA	NA
SQI03890.1|1105747_1106869_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	37.8	2.5e-42
SQI03892.1|1107258_1108695_+	ATP-dependent RNA helicase DeaD	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.3	1.2e-57
>prophage 3
LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3273517	1955119	1968373	3273517		Clostridium_phage(22.22%)	12	NA	NA
SQI04790.1|1955119_1956157_-	PP-loop family protein	NA	A0A0U2S5Z2	Escherichia_phage	36.0	5.4e-31
SQI04791.1|1956355_1956625_+	ACT domain-containing protein	NA	NA	NA	NA	NA
SQI04792.1|1956641_1957994_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQI04793.1|1958205_1958709_-	citrulline cluster-linked gene	NA	E7DN70	Pneumococcus_phage	37.2	1.1e-13
SQI04794.1|1959032_1959908_-	metallo-beta-lactamase family protein	NA	Q332C0	Clostridium_botulinum_C_phage	50.2	1.1e-64
SQI04795.1|1960078_1961401_-	sensor histidine kinase VirS	NA	X5JAC0	Clostridium_phage	37.8	6.1e-72
SQI04796.1|1961394_1962105_-	DNA-binding response regulator, LytTr family	NA	A0A2R2ZGH8	Clostridioides_phage	31.8	3.3e-32
SQI04797.1|1962243_1963257_-	N-acetylmuramoyl-L-alanine amidase	NA	Q8SBN4	Clostridium_phage	64.2	2.5e-121
SQI04798.1|1963353_1963641_-	uncharacterized protein, MTH1187 family	NA	NA	NA	NA	NA
SQI04799.1|1963864_1964878_-	3D/G5 domain-containing protein	NA	A0A143FMI2	Bacillus_phage	52.0	3.5e-19
SQI04800.1|1965303_1966602_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	39.3	3.6e-69
SQI04801.1|1966789_1968373_+	ABC transporter	NA	A0A1V0SGN0	Hokovirus	25.6	8.5e-44
>prophage 4
LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3273517	2651778	2664676	3273517		Streptococcus_phage(100.0%)	13	NA	NA
SQI05419.1|2651778_2652669_-	conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	51.5	3.3e-77
SQI05420.1|2652682_2653681_-	cell wall hydrolase	NA	A0A1S5SEZ8	Streptococcus_phage	63.4	7.5e-123
SQI05421.1|2653677_2655897_-	conjugative transposon protein	NA	A0A1S5SF30	Streptococcus_phage	59.7	3.4e-176
SQI05422.1|2655896_2658344_-	conjugative transposon protein	NA	A0A1S5SF64	Streptococcus_phage	78.8	0.0e+00
SQI05423.1|2658315_2658720_-	conjugative transposon membrane protein	NA	A0A1S5SEX7	Streptococcus_phage	70.6	1.2e-47
SQI05424.1|2658799_2659303_-	conjugative transposon protein	NA	A0A1S5SF25	Streptococcus_phage	59.1	5.6e-50
SQI05425.1|2659391_2659988_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI05426.1|2660050_2660272_-	conjugative transposon protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	1.2e-28
SQI05427.1|2660338_2661523_-	conjugative transposon replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	67.4	4.2e-157
SQI05428.1|2661713_2663117_-	conjugative transposon FtsK/SpoIIIE-like protein	NA	A0A1S5SFB5	Streptococcus_phage	69.9	9.4e-180
SQI05429.1|2663103_2663964_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI05430.1|2663970_2664348_-	conjugative transposon protein	NA	A0A1S5SF96	Streptococcus_phage	81.1	9.0e-45
SQI05431.1|2664361_2664676_-	conjugative transposon protein	NA	A0A1S5SF38	Streptococcus_phage	74.8	1.9e-40
>prophage 5
LS483461	Clostridium perfringens strain NCTC2837 genome assembly, chromosome: 1	3273517	2725006	2789021	3273517	transposase,protease,coat	Clostridium_botulinum_C_phage(15.38%)	60	NA	NA
SQI05482.1|2725006_2725867_+|transposase	IS605 family transposase OrfB	transposase	Q331V1	Clostridium_botulinum_C_phage	74.3	3.3e-111
SQI05483.1|2725896_2726169_+|transposase	ISCpe4, transposase	transposase	Q331V1	Clostridium_botulinum_C_phage	77.8	3.2e-36
SQI05484.1|2726327_2726792_+	ATPase	NA	NA	NA	NA	NA
SQI05485.1|2726785_2727490_+|protease	glycoprotease	protease	NA	NA	NA	NA
SQI05486.1|2727489_2727936_+	ribosomal-protein-alanine acetyltransferase	NA	NA	NA	NA	NA
SQI05487.1|2728217_2728814_-	riboflavin transporter	NA	NA	NA	NA	NA
SQI05488.1|2729160_2731323_-	RNA-binding protein	NA	NA	NA	NA	NA
SQI05489.1|2731434_2732778_+	peptidase	NA	NA	NA	NA	NA
SQI05490.1|2733026_2733998_-	peptide chain release factor 2	NA	A0A2I2MPK0	Mycobacterium_phage	50.0	1.9e-06
SQI05491.1|2734373_2736896_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
SQI05492.1|2737131_2737671_-	30S ribosomal protein S30	NA	NA	NA	NA	NA
SQI05493.1|2738123_2738783_-	comFC protein	NA	NA	NA	NA	NA
SQI05494.1|2738758_2739721_-	comf operon protein A, DNA transporter ATPase	NA	NA	NA	NA	NA
SQI05495.1|2739738_2741973_-	RecD/TraA family helicase	NA	A0A0K2FLP8	Brevibacillus_phage	32.2	4.7e-72
SQI05496.1|2742109_2743246_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
SQI05497.1|2743382_2744558_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	68.1	1.8e-152
SQI05498.1|2745776_2746439_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI05499.1|2746526_2747057_+	sporulation protein YyaC	NA	G3M9W0	Bacillus_virus	38.5	1.0e-17
SQI05500.1|2747095_2748133_-	rod shape-determining protein Mbl	NA	NA	NA	NA	NA
SQI05501.1|2748223_2748475_-	stage III sporulation protein D	NA	M9Q261	Clostridium_phage	58.7	2.4e-17
SQI05502.1|2748549_2749320_-	peptidase	NA	NA	NA	NA	NA
SQI05503.1|2749430_2750453_-	stage II sporulation protein D	NA	Q2XU88	Pseudomonas_phage	35.9	3.0e-34
SQI05504.1|2750564_2751830_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQI05505.1|2751852_2752497_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI05506.1|2752678_2753080_-	ATP synthase F0F1 subunit epsilon	NA	NA	NA	NA	NA
SQI05507.1|2753095_2754493_-	ATP synthase F0F1 subunit beta	NA	NA	NA	NA	NA
SQI05508.1|2754506_2755358_-	ATP synthase F0F1 subunit gamma	NA	NA	NA	NA	NA
SQI05509.1|2755422_2756931_-	ATP synthase F0F1 subunit alpha	NA	NA	NA	NA	NA
SQI05510.1|2756941_2757481_-	ATP synthase F0F1 subunit delta	NA	NA	NA	NA	NA
SQI05511.1|2757483_2757963_-	ATP synthase F0F1 subunit B	NA	NA	NA	NA	NA
SQI05512.1|2758062_2758281_-	ATP synthase F0F1 subunit C	NA	NA	NA	NA	NA
SQI05513.1|2758341_2759016_-	ATP synthase F0F1 subunit A	NA	NA	NA	NA	NA
SQI05514.1|2759081_2759438_-	ATP synthase I chain	NA	NA	NA	NA	NA
SQI05515.1|2760119_2761298_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
SQI05516.1|2761565_2762720_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A1V0SAG5	Catovirus	25.5	2.9e-25
SQI05517.1|2762783_2763413_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
SQI05518.1|2763457_2763907_-	ribose-5-phosphate isomerase B	NA	NA	NA	NA	NA
SQI05519.1|2763986_2764142_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI05520.1|2764170_2765223_-	Sua5/YciO/YrdC/YwlC family protein	NA	A0A291ATS8	Pandoravirus	36.7	8.4e-48
SQI05521.1|2765245_2765836_-	transmembrane protein	NA	NA	NA	NA	NA
SQI05522.1|2765914_2766997_-	peptide chain release factor 1	NA	NA	NA	NA	NA
SQI05523.1|2767053_2768817_-	HemK family methyltransferase	NA	NA	NA	NA	NA
SQI05524.1|2768842_2769442_-	thymidine kinase	NA	A0A249XXF6	Clostridium_phage	48.7	6.6e-50
SQI05525.1|2769597_2769804_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQI05526.1|2769909_2771037_+	monogalactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
SQI05527.1|2771079_2772540_-	transcription termination factor Rho	NA	NA	NA	NA	NA
SQI05528.1|2772804_2774412_-	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.2	3.1e-158
SQI05529.1|2774752_2775172_-	calycin-like domain-containing protein	NA	NA	NA	NA	NA
SQI05530.1|2775194_2776175_-	thiamin biosynthesis protein ThiI	NA	NA	NA	NA	NA
SQI05531.1|2776220_2776850_-	stage II sporulation protein R	NA	NA	NA	NA	NA
SQI05532.1|2776919_2777786_-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
SQI05533.1|2777921_2780546_-	cyanophycin synthetase	NA	NA	NA	NA	NA
SQI05534.1|2780532_2781360_-	cyanophycinase	NA	NA	NA	NA	NA
SQI05535.1|2781459_2783022_-	lysM domain-containing protein	NA	NA	NA	NA	NA
SQI05536.1|2783381_2783618_-	veg protein	NA	NA	NA	NA	NA
SQI05537.1|2783780_2784668_-	peptidase	NA	NA	NA	NA	NA
SQI05538.1|2784870_2785875_-|coat	spore coat protein CotS	coat	NA	NA	NA	NA
SQI05539.1|2785983_2787111_+	mannosyltransferase	NA	B6EFC4	Stygiolobus_rod-shaped_virus	36.6	8.5e-06
SQI05540.1|2787293_2788322_-|coat	spore coat protein	coat	NA	NA	NA	NA
SQI05541.1|2788337_2789021_-|coat	spore coat protein	coat	NA	NA	NA	NA
