assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900477995.1_46931_C01	LS483454	Salmonella enterica subsp. enterica strain NCTC6480 genome assembly, chromosome: 1	1	1014723-1015606	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,14,14	14	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA|49aa|up_0|LS483454.1_1014456_1014603_+,NA	NA|919aa|up_9|LS483454.1_1001705_1004462_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_8|LS483454.1_1004519_1005815_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|LS483454.1_1005866_1008101_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|96aa|up_6|LS483454.1_1008254_1008542_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|99aa|up_5|LS483454.1_1008507_1008804_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|267aa|up_4|LS483454.1_1009572_1010373_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|LS483454.1_1010600_1012238_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|LS483454.1_1012320_1013619_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_1|LS483454.1_1013754_1014426_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|49aa|up_0|LS483454.1_1014456_1014603_+	NA	NA|266aa|down_0|LS483454.1_1015703_1016501_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|LS483454.1_1016588_1016951_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|LS483454.1_1017374_1019174_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|LS483454.1_1019173_1020886_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|LS483454.1_1020961_1021696_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|LS483454.1_1021783_1022737_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|down_6|LS483454.1_1023180_1025844_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|down_7|LS483454.1_1025855_1027412_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|down_8|LS483454.1_1027408_1027969_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|340aa|down_9|LS483454.1_1027982_1029002_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI
GCA_900477995.1_46931_C01	LS483454	Salmonella enterica subsp. enterica strain NCTC6480 genome assembly, chromosome: 1	2	1031653-1032291	2,2	CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29	0	0	NA	NA	I-E:I-E	10,10	10	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|245aa|up_9|LS483454.1_1020961_1021696_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_8|LS483454.1_1021783_1022737_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|up_7|LS483454.1_1023180_1025844_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|LS483454.1_1025855_1027412_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|up_5|LS483454.1_1027408_1027969_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|340aa|up_4|LS483454.1_1027982_1029002_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|LS483454.1_1029051_1029798_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|189aa|up_2|LS483454.1_1029779_1030346_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|LS483454.1_1030342_1031263_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LS483454.1_1031262_1031556_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|LS483454.1_1032305_1033352_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LS483454.1_1033602_1034511_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|LS483454.1_1034520_1035960_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LS483454.1_1035946_1036552_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LS483454.1_1036602_1036926_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LS483454.1_1037116_1037428_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LS483454.1_1037446_1038157_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LS483454.1_1038156_1038636_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LS483454.1_1038632_1039682_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LS483454.1_1039662_1040424_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
