The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	475554	532422	4644636	tRNA,integrase,protease,transposase	Enterobacteria_phage(14.29%)	53	467964:467979	513047:513062
467964:467979	attL	ATTTATTCATCAGCAA	NA	NA	NA	NA
SQH78916.1|475554_475956_+|transposase	ISPsy11, transposase OrfA	transposase	NA	NA	NA	NA
SQH78917.1|476126_476810_+|integrase	integrase	integrase	Q6H9S3	Enterobacteria_phage	33.9	2.9e-17
SQH78918.1|477520_477742_-	lipoprotein	NA	NA	NA	NA	NA
SQH78919.1|477978_481092_-	acriflavin resistance protein F	NA	NA	NA	NA	NA
SQH78920.1|481103_482261_-	acriflavin resistance protein E	NA	NA	NA	NA	NA
SQH78921.1|482673_483345_+	DNA-binding transcriptional regulator EnvR	NA	NA	NA	NA	NA
SQH78922.1|483347_485447_-	histidine kinase	NA	G3MA91	Bacillus_virus	33.9	1.4e-22
SQH78923.1|485597_485762_-	protein yhdU	NA	NA	NA	NA	NA
SQH78924.1|485844_486729_-	methyltransferase	NA	M4QNN5	Ostreococcus_lucimarinus_virus	32.8	1.3e-25
SQH78925.1|486814_487111_-	Fis DNA-binding protein	NA	NA	NA	NA	NA
SQH78926.1|487136_488102_-|tRNA	tRNA-dihydrouridine synthase B	tRNA	NA	NA	NA	NA
SQH78927.1|488762_489644_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
SQH78928.1|489655_491107_-	sodium/pantothenate symporter	NA	NA	NA	NA	NA
SQH78929.1|491096_491339_-	Membrane protein	NA	NA	NA	NA	NA
SQH78930.1|491447_492797_-	biotin carboxylase	NA	NA	NA	NA	NA
SQH78931.1|492807_493278_-	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	NA	NA	NA	NA	NA
SQH78932.1|493670_494270_-	Membrane protein YedZ	NA	NA	NA	NA	NA
SQH78933.1|494270_495275_-	reductase	NA	NA	NA	NA	NA
SQH78934.1|495387_496362_-	oxidoreductase	NA	NA	NA	NA	NA
SQH78935.1|496565_498506_+	lipoprotein	NA	NA	NA	NA	NA
SQH78936.1|498813_499857_+	rod shape-determining protein mreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
SQH78937.1|499921_500974_+	rod shape-determining protein	NA	NA	NA	NA	NA
SQH78938.1|500973_501465_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
SQH78939.1|501473_502067_+	Septum formation protein Maf	NA	NA	NA	NA	NA
SQH78940.1|502056_503526_+	ribonuclease G	NA	NA	NA	NA	NA
SQH78941.1|503632_507433_+	Uncharacterized protein involved in outer membrane biogenesis	NA	NA	NA	NA	NA
SQH78942.1|507577_509023_+|protease	protease TldD	protease	NA	NA	NA	NA
SQH78943.1|509145_510075_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQH78944.1|510256_510460_+	electron transfer flavoprotein FixA	NA	NA	NA	NA	NA
SQH78945.1|510467_511400_+	Fusaric acid resistance protein fusE	NA	NA	NA	NA	NA
SQH78946.1|511405_513373_+	fusaric acid resistance protein FusB/ fusaricacid resistance protein FusC	NA	NA	NA	NA	NA
513047:513062	attR	TTGCTGATGAATAAAT	NA	NA	NA	NA
SQH78947.1|513544_513817_+	putative ribonuclease inhibitor	NA	NA	NA	NA	NA
SQH78948.1|513876_514143_-	membrane protein	NA	NA	NA	NA	NA
SQH78949.1|514246_514510_-	membrane protein	NA	NA	NA	NA	NA
SQH78950.1|514874_515345_-	arginine repressor	NA	NA	NA	NA	NA
SQH78951.1|515759_516698_+	malate dehydrogenase	NA	NA	NA	NA	NA
SQH78952.1|516817_517447_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQH78953.1|517433_518099_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQH78954.1|518309_519578_+	possible membrane transport protein	NA	Q6A201	Oenococcus_phage	33.0	3.3e-59
SQH78955.1|519610_520510_+	tartrate dehydratase subunit alpha	NA	NA	NA	NA	NA
SQH78956.1|520509_521127_+	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA	NA
SQH78957.1|521283_521529_+	oxaloacetate decarboxylase subunit gamma	NA	NA	NA	NA	NA
SQH78958.1|521544_523323_+	oxaloacetate decarboxylase alpha subunit	NA	NA	NA	NA	NA
SQH78959.1|523338_524640_+	oxaloacetate decarboxylase subunit beta	NA	NA	NA	NA	NA
SQH78960.1|524692_525391_+	membrane protein	NA	NA	NA	NA	NA
SQH78961.1|525424_526495_-|protease	serine endoprotease	protease	NA	NA	NA	NA
SQH78962.1|526587_527955_-|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.3	2.7e-22
SQH78963.1|528111_528510_-	cytochrome d ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
SQH78964.1|528702_529827_+	ATP/GTP-binding protein	NA	NA	NA	NA	NA
SQH78965.1|530128_530557_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
SQH78966.1|530572_530965_+	30S ribosomal subunit protein S9	NA	NA	NA	NA	NA
SQH78967.1|531277_531916_+	stringent starvation protein A	NA	NA	NA	NA	NA
SQH78968.1|531921_532422_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	55.8	2.5e-26
>prophage 2
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	1654965	1664136	4644636	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
SQH79970.1|1654965_1655913_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
SQH79971.1|1655896_1656628_+	putative permease transmembrane component	NA	NA	NA	NA	NA
SQH79972.1|1656608_1656716_-	membrane protein	NA	NA	NA	NA	NA
SQH79973.1|1656775_1657507_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
SQH79974.1|1657729_1659415_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
SQH79975.1|1659411_1660131_+	two-component system response regulator	NA	NA	NA	NA	NA
SQH79976.1|1660177_1660645_+	Protein of uncharacterised function (DUF1456)	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
SQH79977.1|1660701_1661232_-	lipoprotein	NA	NA	NA	NA	NA
SQH79978.1|1661403_1661862_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
SQH79979.1|1662102_1664136_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	4.7e-55
>prophage 3
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	1731519	1737825	4644636		Enterobacteria_phage(50.0%)	6	NA	NA
SQH80033.1|1731519_1732923_+	Colanic acid biosynthesis protein wcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
SQH80034.1|1733100_1733994_+	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
SQH80035.1|1734370_1735456_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
SQH80036.1|1735455_1736355_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	2.3e-30
SQH80037.1|1736402_1737281_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	64.1	3.9e-107
SQH80038.1|1737285_1737825_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.5	2.9e-52
>prophage 4
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	1937587	1990730	4644636	integrase,protease,transposase,terminase	Enterobacteria_phage(21.43%)	55	1932032:1932046	1942294:1942308
1932032:1932046	attL	AATGACGTGTGAACG	NA	NA	NA	NA
SQH80237.1|1937587_1937818_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
SQH80238.1|1937955_1938330_+	Copper resistance protein CopC	NA	NA	NA	NA	NA
SQH80239.1|1938330_1939206_+	membrane protein	NA	NA	NA	NA	NA
SQH80240.1|1939222_1939576_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA	NA
SQH80241.1|1939939_1940209_-|integrase	integrase	integrase	K7PHK0	Enterobacteria_phage	47.8	2.7e-11
SQH80242.1|1940223_1940793_-|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	53.4	3.0e-44
SQH80243.1|1941122_1941824_+	lytic enzyme	NA	Q8HA86	Salmonella_phage	93.9	4.0e-38
SQH80244.1|1941820_1942354_+	exported phage protein	NA	A0A291LBG9	Klebsiella_phage	43.0	3.2e-11
1942294:1942308	attR	AATGACGTGTGAACG	NA	NA	NA	NA
SQH80245.1|1942610_1942778_-	lytic enzyme	NA	NA	NA	NA	NA
SQH80246.1|1943085_1943349_+|terminase	terminase	terminase	Q9EYD0	Enterobacteria_phage	58.6	1.3e-18
SQH80247.1|1945952_1946075_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH80248.1|1946523_1947138_-	disulfide bond formation protein	NA	NA	NA	NA	NA
SQH80249.1|1947147_1947306_-	membrane protein	NA	NA	NA	NA	NA
SQH80250.1|1947438_1948353_-	drug/metabolite transporter DMT permease	NA	NA	NA	NA	NA
SQH80251.1|1949143_1949668_-	fimbriae usher protein	NA	NA	NA	NA	NA
SQH80252.1|1949684_1950023_+	putative product	NA	I6RSM4	Salmonella_phage	84.7	8.1e-21
SQH80253.1|1950780_1951941_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	49.1	9.3e-40
SQH80254.1|1953078_1953498_+	acetyltransferase	NA	NA	NA	NA	NA
SQH80255.1|1953869_1954346_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH80256.1|1954675_1955071_-	protein ycgX	NA	C6ZCX4	Enterobacteria_phage	33.6	8.3e-17
SQH80257.1|1955754_1956477_+	guanine nucleotide exchange factor SopE	NA	NA	NA	NA	NA
SQH80258.1|1956762_1956927_+	membrane protein	NA	NA	NA	NA	NA
SQH80259.1|1956899_1957133_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH80260.1|1957150_1957801_+	Serine/threonine-protein phosphatase 1	NA	A0A222YWF0	Escherichia_phage	51.4	1.1e-58
SQH80261.1|1957819_1958011_-	putative secreted protein	NA	NA	NA	NA	NA
SQH80262.1|1958121_1958361_-	conserved domain protein	NA	NA	NA	NA	NA
SQH80263.1|1958475_1960017_-	rRNA (cytosine-C(5)-)-methyltransferase RsmF	NA	NA	NA	NA	NA
SQH80264.1|1959992_1962626_-	mce-related protein	NA	NA	NA	NA	NA
SQH80265.1|1962594_1963878_-	Paraquat-inducible protein A	NA	NA	NA	NA	NA
SQH80266.1|1963934_1964504_+	GAF domain-containing protein	NA	NA	NA	NA	NA
SQH80267.1|1964601_1965288_+	ProP effector	NA	NA	NA	NA	NA
SQH80268.1|1965307_1967356_+|protease	Tail-specific protease precursor	protease	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
SQH80269.1|1967549_1968431_+	heat shock protein	NA	NA	NA	NA	NA
SQH80270.1|1968478_1969852_-	export protein	NA	NA	NA	NA	NA
SQH80271.1|1969916_1970024_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH80272.1|1970027_1970819_+	transcriptional regulator KdgR	NA	NA	NA	NA	NA
SQH80273.1|1971030_1971270_-	putative exported protein	NA	NA	NA	NA	NA
SQH80274.1|1971427_1971571_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQH80275.1|1971641_1971929_+	putative exported protein	NA	NA	NA	NA	NA
SQH80276.1|1973162_1974908_+	penicillin-binding protein	NA	NA	NA	NA	NA
SQH80277.1|1974973_1975783_+	23S rRNA methyltransferase A	NA	NA	NA	NA	NA
SQH80278.1|1975779_1976346_-	membrane protein YebN	NA	NA	NA	NA	NA
SQH80279.1|1976755_1977214_-	membrane protein	NA	NA	NA	NA	NA
SQH80280.1|1977272_1978124_-	PTS mannose transporter subunit IID	NA	NA	NA	NA	NA
SQH80281.1|1978136_1978937_-	phosphotransferase enzyme II, C component	NA	NA	NA	NA	NA
SQH80282.1|1978989_1979958_-	PTS system mannose-specific transporter subunit IIAB	NA	NA	NA	NA	NA
SQH80283.1|1980430_1981990_+	Magnesium and cobalt efflux protein CorC	NA	A0A0R6PEZ3	Moraxella_phage	44.4	9.5e-40
SQH80284.1|1982011_1983613_-	cyclic diguanylate phosphodiesterase (EAL) domain protein	NA	NA	NA	NA	NA
SQH80285.1|1983750_1985115_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
SQH80286.1|1985378_1985957_-	putative nudix hydrolase YeaB	NA	NA	NA	NA	NA
SQH80287.1|1985960_1987325_-	para-aminobenzoate synthase component I	NA	A0A0B5J984	Pandoravirus	35.0	1.5e-44
SQH80288.1|1987405_1987585_+	conserved domain protein	NA	NA	NA	NA	NA
SQH80289.1|1987590_1987935_-	Putative translation initiation inhibitor YoaB	NA	NA	NA	NA	NA
SQH80290.1|1988066_1989977_+	ATP-dependent helicase	NA	A0A127AW80	Bacillus_phage	32.7	4.5e-92
SQH80291.1|1990034_1990730_+|protease	metal-dependent protease-like protein, putative molecular chaperone	protease	NA	NA	NA	NA
>prophage 5
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	2732047	2817336	4644636	holin,capsid,terminase,tRNA,protease,tail,transposase	Salmonella_phage(27.27%)	82	NA	NA
SQH81008.1|2732047_2732377_+|tRNA	tRNA 2-thiouridine synthesizing protein E	tRNA	NA	NA	NA	NA
SQH81009.1|2732373_2732655_-	acylphosphatase	NA	NA	NA	NA	NA
SQH81010.1|2732703_2733492_-	transcriptional regulator	NA	NA	NA	NA	NA
SQH81011.1|2733508_2734057_-	kinase inhibitor	NA	NA	NA	NA	NA
SQH81012.1|2734271_2735483_+	LSU m5C1962 methyl transferase RlmI	NA	NA	NA	NA	NA
SQH81013.1|2735540_2735858_+	hemimethylated DNA binding protein YccV	NA	NA	NA	NA	NA
SQH81014.1|2735902_2736316_-	Succinyl-CoA synthetase alpha subunit-related enzyme	NA	NA	NA	NA	NA
SQH81015.1|2736489_2737152_+	UPF0319 protein YccT precursor	NA	NA	NA	NA	NA
SQH81016.1|2737246_2737705_+	methylglyoxal synthase	NA	NA	NA	NA	NA
SQH81017.1|2737740_2739795_-	helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
SQH81018.1|2739918_2740365_+	Inner membrane protein YccF	NA	NA	NA	NA	NA
SQH81019.1|2740383_2742537_+	Putative efflux (PET) family inner membrane protein YccS	NA	NA	NA	NA	NA
SQH81020.1|2742523_2743129_-	DNA transformation protein TfoX	NA	NA	NA	NA	NA
SQH81021.1|2743345_2743855_+	cell division inhibitor	NA	NA	NA	NA	NA
SQH81022.1|2744211_2745264_+	outer membrane protein A	NA	NA	NA	NA	NA
SQH81023.1|2745335_2745788_-	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
SQH81024.1|2745973_2747734_+|protease	protease	protease	NA	NA	NA	NA
SQH81025.1|2747802_2748321_+	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA	NA
SQH81026.1|2748843_2749407_-	lipoprotein	NA	NA	NA	NA	NA
SQH81027.1|2749403_2751044_-	paraquat-inducible protein B	NA	NA	NA	NA	NA
SQH81028.1|2751048_2752302_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
SQH81029.1|2752316_2754224_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	5.4e-53
SQH81030.1|2754236_2756345_-	23S rRNA (guanine-N-2-) -methyl transferase rlmL	NA	NA	NA	NA	NA
SQH81031.1|2756443_2757553_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA	NA
SQH81032.1|2757549_2758092_-	Z-ring-associated protein C	NA	NA	NA	NA	NA
SQH81033.1|2758257_2759268_-	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
SQH81034.1|2759475_2762088_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	4.8e-20
SQH81035.1|2762594_2763020_+	Gifsy-1 prophage protein	NA	NA	NA	NA	NA
SQH81036.1|2763016_2764237_-|transposase	transposase	transposase	NA	NA	NA	NA
SQH81037.1|2764887_2765610_+	type III secretion protein SopE	NA	NA	NA	NA	NA
SQH81038.1|2766377_2767202_-|tail	phage tail assembly-like protein	tail	A0A0M4QWS3	Salmonella_phage	88.7	2.8e-139
SQH81039.1|2769627_2769870_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH81040.1|2769908_2773259_-	host specificity protein J	NA	A0A0K2FI38	Escherichia_phage	69.3	0.0e+00
SQH81041.1|2773330_2773873_-|tail	Gifsy-2 prophage probable tail assembly protein	tail	K7PH50	Enterobacteria_phage	63.1	1.4e-46
SQH81042.1|2773932_2774670_-|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	75.6	5.2e-113
SQH81043.1|2774679_2775375_-|tail	tail protein	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
SQH81044.1|2775464_2775998_+	superoxide dismutase	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
SQH81045.1|2776087_2776612_-	attachment/invasion protein	NA	A0A1B0VBR9	Salmonella_phage	35.3	1.8e-19
SQH81046.1|2776710_2777043_-|tail	tail protein	tail	A5LH39	Enterobacteria_phage	61.5	2.6e-35
SQH81047.1|2777039_2780126_-	gifsy-1 prophage VmtH	NA	A0A291AWX1	Escherichia_phage	62.0	2.6e-262
SQH81048.1|2780106_2780358_-|tail	tail protein	tail	A5LH37	Enterobacteria_phage	45.2	2.1e-13
SQH81049.1|2780432_2780831_-|tail	minor tail protein	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
SQH81050.1|2780876_2781626_-|tail	major tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
SQH81051.1|2781637_2782039_-|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	2.0e-42
SQH81052.1|2782035_2782602_-|tail	prophage minor tail protein Z	tail	Q9G063	Phage_Gifsy-2	95.7	2.1e-13
SQH81053.1|2782582_2782849_-	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	46.2	4.9e-13
SQH81054.1|2782874_2783198_-	recombinase RecA	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
SQH81055.1|2783288_2785340_-|protease	ATP dependent Clp protease	protease	A0A291AWT6	Escherichia_phage	69.4	8.1e-265
SQH81056.1|2785290_2786838_-|capsid	capsid protein	capsid	A0A291AWU2	Escherichia_phage	63.8	1.1e-176
SQH81057.1|2786834_2787041_-	primosomal replication protein PriB/PriC domain protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
SQH81058.1|2787037_2789173_-|terminase	phage terminase large subunit	terminase	A5LH27	Enterobacteria_phage	72.6	6.9e-291
SQH81059.1|2789132_2789666_-	Gifsy-2 prophage protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
SQH81060.1|2789876_2790371_-	Phage outer membrane lytic protein Rz, Endopeptidase	NA	Q56118	Enterobacteria_phage	77.3	2.2e-59
SQH81061.1|2790372_2790471_-	Phage protein	NA	NA	NA	NA	NA
SQH81062.1|2790678_2791218_-	Phage endolysin R	NA	K7PLY1	Enterobacteria_phage	72.4	2.2e-76
SQH81063.1|2791195_2791504_-|holin	phage-holin analog protein	holin	NA	NA	NA	NA
SQH81064.1|2792393_2793191_-	molecular chaperone	NA	A0A0M4S661	Salmonella_phage	99.6	4.0e-151
SQH81065.1|2793323_2793935_-	bacteriophage Lambda NinG protein	NA	A0A0M4RU10	Salmonella_phage	97.5	3.0e-90
SQH81066.1|2793937_2794144_-	Phage protein	NA	S4TNP0	Salmonella_phage	98.5	4.6e-35
SQH81067.1|2794143_2794746_-	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
SQH81068.1|2794808_2795114_-	putative bacteriophage cohesive ends	NA	NA	NA	NA	NA
SQH81069.1|2795745_2797725_-	alkyl/aryl-sulfatase BDS1	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
SQH81070.1|2798121_2799252_+	Bacteriophytochrome cph2	NA	NA	NA	NA	NA
SQH81071.1|2799538_2799934_-	DNA-binding protein	NA	A0A088CBK9	Shigella_phage	38.8	9.8e-18
SQH81072.1|2799946_2800408_-	Replication protein 14	NA	A0A0U2JGJ0	Escherichia_phage	74.8	7.8e-67
SQH81073.1|2800400_2801408_-	replication protein	NA	A0A0U2RT81	Escherichia_phage	67.0	1.7e-122
SQH81074.1|2801454_2801949_-	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA	NA
SQH81075.1|2801935_2802190_-	CRO	NA	K7PKH4	Enterobacteria_phage	59.4	1.2e-16
SQH81076.1|2802286_2802712_+	transcriptional regulator	NA	K7PH71	Enterobacterial_phage	56.3	1.2e-13
SQH81077.1|2803021_2803177_+	Protein of uncharacterised function (DUF1391)	NA	M4QQ57	Salicola_phage	55.3	8.0e-08
SQH81078.1|2803558_2803843_+	DNA breaking-rejoining protein	NA	K7PGY4	Enterobacteria_phage	53.2	1.7e-08
SQH81079.1|2803917_2804253_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH81080.1|2804390_2807558_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	67.2	0.0e+00
SQH81081.1|2807568_2808678_+	Gifsy-2 prophage RecT	NA	H6WRX0	Salmonella_phage	100.0	7.1e-207
SQH81082.1|2808720_2808960_+	putative bacteriophage protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
SQH81083.1|2809000_2809249_+	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
SQH81084.1|2809293_2810586_+	Integrase	NA	S4TSP2	Salmonella_phage	100.0	3.4e-253
SQH81085.1|2810780_2811983_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
SQH81086.1|2812063_2813497_-	amino acid:proton symporter	NA	NA	NA	NA	NA
SQH81087.1|2813742_2814957_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
SQH81088.1|2815273_2815735_+	DNA-binding protein	NA	NA	NA	NA	NA
SQH81089.1|2815935_2817336_+|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
>prophage 6
LS483453	Salmonella enterica subsp. enterica serovar Aberdeen strain NCTC5791 genome assembly, chromosome: 1	4644636	3294578	3353771	4644636	tRNA,protease,transposase	Bacillus_phage(25.0%)	50	NA	NA
SQH81520.1|3294578_3295496_+|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	protease	NA	NA	NA	NA
SQH81521.1|3295492_3295945_+|protease	Putative activity regulator of membraneprotease YbbK	protease	NA	NA	NA	NA
SQH81522.1|3295945_3296362_-	copper efflux regulator	NA	NA	NA	NA	NA
SQH81523.1|3296471_3298973_+	Lead cadmium zinc and mercury transporting ATPase	NA	A0A218MNH6	uncultured_virus	37.1	1.5e-111
SQH81524.1|3299126_3299954_+	Secreted protein	NA	NA	NA	NA	NA
SQH81525.1|3301035_3301515_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
SQH81526.1|3301631_3303284_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
SQH81527.1|3303456_3304677_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
SQH81528.1|3304891_3306568_+	transport protein	NA	NA	NA	NA	NA
SQH81529.1|3306690_3308040_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
SQH81530.1|3308147_3309119_+	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	1.1e-14
SQH81531.1|3309115_3310078_-	ferrochelatase	NA	NA	NA	NA	NA
SQH81532.1|3310306_3310951_-	adenylate kinase	NA	NA	NA	NA	NA
SQH81533.1|3311192_3313067_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.9	1.7e-115
SQH81534.1|3313177_3313783_-	recombination protein RecR	NA	NA	NA	NA	NA
SQH81535.1|3313782_3314112_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
SQH81536.1|3316199_3316751_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
SQH81537.1|3316903_3317281_-	Inner membrane protein YbaN	NA	NA	NA	NA	NA
SQH81538.1|3317361_3317877_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
SQH81539.1|3317890_3318058_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQH81540.1|3318127_3319051_+|transposase	ISNCY transposase	transposase	Q2A0A7	Sodalis_phage	52.1	7.3e-64
SQH81541.1|3319092_3322455_-	integral membrane protein AefA	NA	NA	NA	NA	NA
SQH81542.1|3322573_3323227_-	potential acrAB operon repressor	NA	NA	NA	NA	NA
SQH81543.1|3323368_3324562_+	acriflavin resistance protein A	NA	NA	NA	NA	NA
SQH81544.1|3324584_3327734_+	acriflavin resistance protein B	NA	NA	NA	NA	NA
SQH81545.1|3328229_3328604_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
SQH81546.1|3328631_3328850_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
SQH81547.1|3329028_3329580_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
SQH81548.1|3329696_3330167_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQH81549.1|3330363_3330627_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQH81550.1|3330851_3332402_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
SQH81551.1|3332710_3333022_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
SQH81552.1|3333054_3333624_-	lipoprotein	NA	NA	NA	NA	NA
SQH81553.1|3333838_3334699_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
SQH81554.1|3334798_3336085_-	ammonium transporter	NA	NA	NA	NA	NA
SQH81555.1|3336116_3336455_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
SQH81556.1|3336667_3338449_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	26.7	3.2e-39
SQH81557.1|3338441_3340214_-	ABC transporter ATP-binding membrane protein	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
SQH81558.1|3340254_3340713_-	transcriptional regulator	NA	NA	NA	NA	NA
SQH81559.1|3340825_3341881_+	lyase	NA	NA	NA	NA	NA
SQH81560.1|3341930_3342749_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
SQH81561.1|3342849_3344550_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQH81562.1|3344614_3345310_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.0	3.5e-87
SQH81563.1|3345415_3345814_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA	NA
SQH81564.1|3345917_3346292_-	competence protein ComEA	NA	NA	NA	NA	NA
SQH81565.1|3346441_3348313_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
SQH81566.1|3348603_3348876_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
SQH81567.1|3349084_3351439_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	52.5	1.6e-224
SQH81568.1|3351624_3352896_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	5.6e-131
SQH81569.1|3353147_3353771_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
