The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483440	Gemella morbillorum strain NCTC11323 genome assembly, chromosome: 1	1760930	628212	664840	1760930	holin,terminase,portal,capsid	Streptococcus_phage(40.62%)	56	NA	NA
SQH55166.1|628212_628653_-	Metallopeptidase immA	NA	D2XR38	Bacillus_phage	37.7	1.7e-15
SQH55167.1|628642_629044_-	Helix-turn-helix	NA	A0A1J0MG99	Staphylococcus_phage	62.3	1.5e-18
SQH55168.1|629183_629405_+	Helix-turn-helix	NA	NA	NA	NA	NA
SQH55169.1|629479_629614_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55170.1|629603_629849_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55171.1|629903_630149_+	Helix-turn-helix domain	NA	NA	NA	NA	NA
SQH55172.1|630384_630591_+	Predicted transcriptional regulator with an HTH domain	NA	NA	NA	NA	NA
SQH55173.1|630587_630767_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55174.1|630777_631284_+	Uncharacterized protein conserved in bacteria	NA	A0A1J0MFN0	Staphylococcus_phage	35.9	1.0e-11
SQH55175.1|631361_631757_+	Protein of unknwon function (DUF3310)	NA	S4TZT3	uncultured_phage	51.2	3.6e-28
SQH55176.1|631761_631950_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55177.1|631927_632287_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55178.1|632302_632731_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55179.1|632730_633912_+	Protein of uncharacterised function (DUF2800)	NA	A0A0A7S066	Clostridium_phage	44.1	3.8e-81
SQH55180.1|633939_634650_+	Protein of uncharacterised function (DUF2815)	NA	A0A249XNQ7	Brevibacterium_phage	38.6	2.0e-24
SQH55181.1|634698_636672_+	bifunctional 3'-5' exonuclease/DNA polymerase	NA	H7BVQ1	unidentified_phage	53.5	1.6e-196
SQH55182.1|636688_637387_+	Predicted P-loop ATPase and inactivated derivatives	NA	A0A1S7FZ15	Listeria_phage	39.3	2.0e-42
SQH55183.1|637446_639090_+	Predicted P-loop ATPase and inactivated derivatives	NA	A0A0A7RTG3	Clostridium_phage	45.6	5.9e-141
SQH55184.1|639476_639758_+	VRR-NUC domain	NA	A0A2I6PDQ7	Staphylococcus_phage	46.6	5.7e-12
SQH55185.1|639754_641146_+	DNA methylase	NA	S5MA26	Brevibacillus_phage	51.5	1.0e-133
SQH55186.1|641142_641328_+	Predicted transcriptional regulator	NA	NA	NA	NA	NA
SQH55187.1|641333_641549_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55188.1|641553_641790_+	Uncharacterised protein	NA	A0A0E3TAK6	Staphylococcus_phage	53.2	1.2e-15
SQH55189.1|641779_642238_+	Uncharacterised protein	NA	A0A1S5SDS7	Streptococcus_phage	30.0	2.5e-09
SQH55190.1|642249_642648_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55191.1|642652_643036_+	YopX protein	NA	NA	NA	NA	NA
SQH55192.1|643032_643236_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55193.1|643247_643508_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55194.1|643759_643903_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55195.1|643917_644142_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55196.1|644169_644559_+	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA	NA
SQH55197.1|644779_645205_+	Terminase small subunit	NA	H9A0M8	Staphylococcus_phage	59.0	1.9e-35
SQH55198.1|645197_646502_+|terminase	phage terminase, large subunit, PBSX family	terminase	A0A286QNX6	Streptococcus_phage	74.1	8.1e-194
SQH55199.1|646563_648009_+|portal	phage portal protein, putative, A118 family	portal	M1IFC5	Streptococcus_phage	65.9	7.9e-182
SQH55200.1|647992_649696_+	NAD(+)--arginine ADP-ribosyltransferase EFV	NA	A0A1S5SA71	Streptococcus_phage	44.2	4.9e-90
SQH55201.1|649688_649877_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55202.1|650006_650573_+	Phage minor structural protein GP20	NA	A0A2H4JBH4	uncultured_Caudovirales_phage	50.8	5.3e-41
SQH55203.1|650589_651477_+	Uncharacterised protein	NA	A0A1P8VVM7	Streptococcus_phage	64.9	1.3e-105
SQH55204.1|651489_651744_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55205.1|651772_652162_+	Uncharacterised protein	NA	A0A2H4JHX8	uncultured_Caudovirales_phage	54.2	3.8e-30
SQH55206.1|652151_652490_+|capsid	Minor capsid protein	capsid	K4K7N7	Streptococcus_phage	47.3	1.1e-20
SQH55207.1|652489_652834_+|capsid	Minor capsid protein	capsid	A0A1P8VVL8	Streptococcus_phage	46.7	5.4e-20
SQH55208.1|652830_653220_+|capsid	Minor capsid protein from bacteriophage	capsid	K4JW65	Streptococcus_phage	56.6	3.5e-36
SQH55209.1|653234_653690_+	Uncharacterised protein	NA	A0A1P8VVM4	Streptococcus_phage	60.9	9.8e-46
SQH55210.1|653707_654070_+	Uncharacterised protein	NA	A0A286QNZ4	Streptococcus_phage	31.4	3.1e-10
SQH55211.1|654072_654651_+	Bacteriophage Gp15 protein	NA	A0A286QMS7	Streptococcus_phage	48.6	3.4e-51
SQH55212.1|654678_657942_+	Phage-related protein	NA	C5IUK3	Streptococcus_phage	49.9	1.7e-110
SQH55213.1|657938_658664_+	Phage-related protein	NA	Q938K2	Temperate_phage	33.1	6.2e-34
SQH55214.1|658663_660613_+	Phage-related protein	NA	Q938K1	Temperate_phage	29.8	6.9e-80
SQH55215.1|660613_661324_+	Collagen triple helix repeat (20 copies)	NA	Q938K0	Temperate_phage	57.4	1.6e-10
SQH55216.1|661332_661662_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55217.1|661665_663267_+	gp58-like protein	NA	C5J973	Streptococcus_phage	44.0	5.2e-49
SQH55218.1|663256_663457_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55219.1|663456_664245_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55220.1|664231_664414_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55221.1|664450_664840_+|holin	Phage-related holin (Lysis protein)	holin	A0A097QQ04	Enterococcus_phage	55.6	1.9e-29
>prophage 2
LS483440	Gemella morbillorum strain NCTC11323 genome assembly, chromosome: 1	1760930	797959	809449	1760930		Synechococcus_phage(28.57%)	8	NA	NA
SQH55344.1|797959_801634_+	Phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	30.9	8.9e-28
SQH55345.1|801635_802343_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	39.4	1.8e-41
SQH55346.1|802329_803787_+	Amidophosphoribosyltransferase precursor	NA	A0A0M3SGR2	Mollivirus	33.3	1.0e-48
SQH55347.1|803779_804784_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	43.6	1.4e-65
SQH55348.1|804780_805347_+	Phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	36.3	1.0e-23
SQH55349.1|805343_806864_+	Bifunctional purine biosynthesis protein PurH	NA	Q58MG4	Prochlorococcus_phage	50.0	3.2e-72
SQH55350.1|806863_808099_+	Phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQH55351.1|808144_809449_+	Adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	29.7	7.3e-17
>prophage 3
LS483440	Gemella morbillorum strain NCTC11323 genome assembly, chromosome: 1	1760930	1132690	1139320	1760930		Moumouvirus(16.67%)	9	NA	NA
SQH55657.1|1132690_1134028_+	Glutamine synthetase	NA	M1NM71	Moumouvirus	25.6	1.9e-12
SQH55658.1|1134119_1134425_-	Thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.1	1.1e-21
SQH55659.1|1134507_1136112_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.1	1.2e-154
SQH55660.1|1136120_1136396_-	co-chaperonin GroES	NA	NA	NA	NA	NA
SQH55661.1|1136771_1136897_+	NADH peroxidase	NA	NA	NA	NA	NA
SQH55662.1|1137014_1138136_+	NADH peroxidase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.0	2.9e-06
SQH55663.1|1138178_1138385_-	transcription attenuation protein MtrB	NA	NA	NA	NA	NA
SQH55664.1|1138418_1138979_-	GTP cyclohydrolase 1	NA	E7DN69	Pneumococcus_phage	45.3	7.4e-35
SQH55665.1|1139047_1139320_-	HB	NA	A0A1P8CWT5	Bacillus_phage	66.7	3.7e-24
>prophage 4
LS483440	Gemella morbillorum strain NCTC11323 genome assembly, chromosome: 1	1760930	1281391	1328185	1760930	holin,terminase,head,portal,tail,protease,tRNA,bacteriocin,capsid	Erysipelothrix_phage(41.94%)	51	NA	NA
SQH55787.1|1281391_1284034_-|tRNA	Valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	40.2	2.6e-154
SQH55788.1|1284490_1285918_-	Na+/alanine symporter	NA	NA	NA	NA	NA
SQH55789.1|1286238_1286871_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55790.1|1286993_1287470_-	Ribosomal RNA large subunit methyltransferase H	NA	NA	NA	NA	NA
SQH55791.1|1287520_1288333_-	Phosphatase YidA	NA	NA	NA	NA	NA
SQH55792.1|1288773_1289097_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55793.1|1289107_1289845_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55794.1|1289858_1290890_-	Predicted metal-binding protein	NA	NA	NA	NA	NA
SQH55795.1|1290892_1291771_-	Putative multidrug export ATP-binding/permease protein SAV1866	NA	L7RFR4	Acanthamoeba_polyphaga_moumouvirus	26.8	1.0e-06
SQH55796.1|1291930_1292551_-|bacteriocin	ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain	bacteriocin	NA	NA	NA	NA
SQH55797.1|1292666_1294232_-	Transposon Tn3 resolvase	NA	Q6DMS5	Streptococcus_phage	56.6	9.6e-157
SQH55798.1|1294235_1295132_-	Transposon Tn3 resolvase	NA	M1NSJ1	Streptococcus_phage	49.3	3.9e-78
SQH55799.1|1295178_1295346_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55800.1|1295335_1295728_-	Uncharacterised protein	NA	A0A1B0RXC6	Streptococcus_phage	35.8	2.0e-15
SQH55801.1|1295951_1296656_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55802.1|1296693_1297545_-	Cpl-7 lysozyme C-terminal domain	NA	D7RWE7	Brochothrix_phage	43.2	3.9e-35
SQH55803.1|1297546_1297945_-|holin	Phage-related holin (Lysis protein)	holin	A0A2K5B2A2	Erysipelothrix_phage	63.4	5.1e-38
SQH55804.1|1297946_1299305_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55805.1|1299294_1301091_-	Uncharacterised protein	NA	M9Q2I5	Clostridium_phage	25.0	9.4e-07
SQH55806.1|1301091_1301451_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55807.1|1301452_1304323_-|tail	Phage-related minor tail protein	tail	H7BVF3	unidentified_phage	51.0	1.7e-71
SQH55808.1|1304495_1304861_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55809.1|1304860_1305424_-|tail	phage major tail protein, phi13 family	tail	A0A0U4JWV5	Exiguobacterium_phage	48.6	1.9e-38
SQH55810.1|1305426_1305744_-	Uncharacterised protein	NA	Q6DMT6	Streptococcus_phage	36.6	1.2e-13
SQH55811.1|1305740_1306118_-	Bacteriophage protein of uncharacterised function (DUF646)	NA	A0A290FZT5	Caldibacillus_phage	46.4	4.1e-13
SQH55812.1|1306110_1306443_-|head,tail	Bacteriophage head-tail adaptor	head,tail	NA	NA	NA	NA
SQH55813.1|1306444_1306729_-	uncharacterized phage protein (possible DNA packaging)	NA	A0A1X9I695	Streptococcus_phage	45.7	1.1e-10
SQH55814.1|1306737_1307904_-|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A2I4R671	Erysipelothrix_phage	48.4	4.1e-96
SQH55815.1|1307909_1308632_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	Q6DMU1	Streptococcus_phage	58.6	2.7e-66
SQH55816.1|1308594_1309884_-|portal	phage portal protein, HK97 family	portal	A0A2K5B287	Erysipelothrix_phage	69.7	3.6e-162
SQH55817.1|1309957_1311055_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55818.1|1311104_1312706_-|terminase	Phage terminase-like protein, large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	80.9	1.0e-259
SQH55819.1|1312763_1313060_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55820.1|1313131_1313353_-	Uncharacterised protein	NA	A0A2K5B281	Erysipelothrix_phage	47.1	1.2e-12
SQH55821.1|1313563_1313665_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55822.1|1313727_1315188_-	Modification methylase HhaI	NA	A0A1P8DJM9	Virus_Rctr41k	27.7	9.6e-34
SQH55823.1|1315165_1316431_-	Modification methylase DpnIIB	NA	Q6DMV0	Streptococcus_phage	46.8	1.9e-99
SQH55824.1|1316443_1317226_-	S-adenosylmethionine synthetase	NA	NA	NA	NA	NA
SQH55825.1|1317241_1317793_-	Uncharacterised protein	NA	A0A2K5B277	Erysipelothrix_phage	54.6	1.8e-49
SQH55826.1|1317964_1318336_-	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	52.1	3.0e-32
SQH55827.1|1318442_1318868_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55828.1|1318871_1320218_-	ATP-dependent helicase HepA	NA	A0A2K5B273	Erysipelothrix_phage	67.9	1.1e-158
SQH55829.1|1320198_1320480_-	VRR-NUC domain	NA	M1PFY8	Streptococcus_phage	53.3	1.7e-19
SQH55830.1|1320709_1322959_-	phage/plasmid primase, P4 family, C-terminal domain	NA	A0A1B0RXC5	Streptococcus_phage	46.9	8.0e-197
SQH55831.1|1322960_1323317_-	Uncharacterised protein	NA	A0A2K5B270	Erysipelothrix_phage	53.0	1.0e-29
SQH55832.1|1323309_1323981_-	Uncharacterized phage-encoded protein	NA	A0A2K5B268	Erysipelothrix_phage	69.4	1.3e-86
SQH55833.1|1324082_1326023_-	DNA polymerase I, thermostable	NA	A0A2K5B2B0	Erysipelothrix_phage	65.8	6.7e-261
SQH55834.1|1326019_1326142_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH55835.1|1326154_1326700_-	Protein of uncharacterised function (DUF2815)	NA	A0A2K5B2A9	Erysipelothrix_phage	83.5	1.4e-83
SQH55836.1|1326702_1327839_-	Protein of uncharacterised function (DUF2800)	NA	A0A2K5B2A8	Erysipelothrix_phage	55.6	2.0e-111
SQH55837.1|1327840_1328185_-	Uncharacterised protein	NA	S5M5X1	Brevibacillus_phage	48.2	4.9e-05
>prophage 5
LS483440	Gemella morbillorum strain NCTC11323 genome assembly, chromosome: 1	1760930	1384896	1391258	1760930		Staphylococcus_phage(33.33%)	8	NA	NA
SQH55892.1|1384896_1385661_+	Probable siderophore transport system ATP-binding protein YusV	NA	G3M9Y6	Bacillus_virus	28.5	2.3e-18
SQH55893.1|1386504_1386843_-	Cadmium efflux system accessory protein	NA	E4ZFI8	Streptococcus_phage	32.4	6.5e-10
SQH55894.1|1386854_1387469_-	cadmium resistance transporter family protein	NA	NA	NA	NA	NA
SQH55895.1|1388292_1388598_+	Thiosulfate sulfurtransferase glpE	NA	A0A2H4PQR9	Staphylococcus_phage	45.1	7.3e-13
SQH55896.1|1388692_1388989_+	Thiosulfate sulfurtransferase glpE	NA	A0A2H4PQR9	Staphylococcus_phage	40.7	4.9e-14
SQH55897.1|1389118_1389376_-	Copper-sensitive operon repressor	NA	NA	NA	NA	NA
SQH55898.1|1389519_1390548_-	Histidine protein kinase saeS	NA	W8CYF6	Bacillus_phage	28.2	1.8e-26
SQH55899.1|1390568_1391258_-	Staphylococcus exoprotein expression protein R	NA	W8CYM9	Bacillus_phage	39.2	6.9e-35
