The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	36584	48946	1756874		Synechococcus_phage(28.57%)	8	NA	NA
SQH25911.1|36584_40358_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.8	2.1e-40
SQH25912.1|40518_41973_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.9	1.7e-54
SQH25913.1|42000_43023_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	41.4	9.0e-63
SQH25914.1|43190_43745_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	1.5e-24
SQH25915.1|43928_45476_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.9	2.0e-45
SQH25916.1|45534_46659_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQH25917.1|46911_48177_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQH25918.1|48454_48946_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	327869	333902	1756874		Streptococcus_phage(100.0%)	8	NA	NA
SQH26182.1|327869_328505_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.0e-65
SQH26183.1|328522_329398_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.9	1.8e-72
SQH26184.1|330060_330384_+	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQH26185.1|330388_331252_+	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
SQH26186.1|331278_331671_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQH26187.1|331717_332347_-	copper homeostasis protein	NA	NA	NA	NA	NA
SQH26188.1|332644_333001_+	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
SQH26189.1|333074_333902_-	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.5	4.9e-128
>prophage 3
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	601087	673613	1756874	protease,transposase,tRNA,head	Streptococcus_phage(19.23%)	68	NA	NA
SQH26443.1|601087_603298_-	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
SQH26444.1|603405_604569_+	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	5.8e-143
SQH26445.1|604565_605252_+	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
SQH26446.1|605345_606512_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
SQH26447.1|606572_606914_+	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	39.3	2.9e-18
SQH26448.1|607134_608487_+	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	23.8	1.0e-29
SQH26449.1|608567_609845_-	folylpolyglutamate synthase	NA	NA	NA	NA	NA
SQH26450.1|609874_610315_-	membrane protein	NA	NA	NA	NA	NA
SQH26451.1|610549_611692_+	aminotransferase class-V family protein	NA	A0A1X6WFP1	Pacmanvirus	27.0	4.1e-24
SQH26452.1|611703_612918_+	thiamine biosynthesis protein thiI	NA	NA	NA	NA	NA
SQH26453.1|612955_614248_+	metallophosphatase	NA	A0A2H4JC87	uncultured_Caudovirales_phage	31.1	7.6e-35
SQH26454.1|614266_615220_-|transposase	transposase	transposase	H7BW61	unidentified_phage	34.3	2.2e-31
SQH26455.1|615494_615809_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
SQH26456.1|615820_616147_+	hypothetical ribosome-associated protein	NA	NA	NA	NA	NA
SQH26457.1|616174_616468_+	LSU ribosomal protein L27p	NA	NA	NA	NA	NA
SQH26458.1|616613_616724_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH26459.1|616825_617740_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQH26460.1|617736_618195_+	signal peptidase II	NA	NA	NA	NA	NA
SQH26461.1|618184_619075_+	ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	25.3	2.7e-07
SQH26462.1|619469_619991_+	Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR	NA	NA	NA	NA	NA
SQH26463.1|620006_621266_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	36.2	7.9e-61
SQH26464.1|621275_622262_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	32.6	1.9e-25
SQH26465.1|622305_623388_+	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.9	4.7e-62
SQH26466.1|623633_626810_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
SQH26467.1|627015_628287_+	RND family efflux transporter MFP subunit	NA	NA	NA	NA	NA
SQH26468.1|628286_628997_+	bacitracin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	43.0	4.5e-37
SQH26469.1|629008_630229_+	permease family protein	NA	NA	NA	NA	NA
SQH26470.1|630482_632216_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
SQH26471.1|632342_632615_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
SQH26472.1|632624_632864_+	RNA binding protein	NA	NA	NA	NA	NA
SQH26473.1|633796_636823_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA	NA
SQH26474.1|636842_637244_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
SQH26475.1|637423_638299_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA	NA
SQH26476.1|638434_638632_+	transcriptional regulator, TetR family	NA	NA	NA	NA	NA
SQH26477.1|639112_639631_+	16S rRNA-processing protein	NA	NA	NA	NA	NA
SQH26478.1|639620_640352_+|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
SQH26479.1|640351_641344_+	thioredoxin reductase	NA	Q9JRK7	Streptococcus_phage	54.9	1.4e-28
SQH26480.1|641521_642580_+	regulatory protein	NA	NA	NA	NA	NA
SQH26481.1|642592_643516_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
SQH26482.1|643816_644485_+	deoR-like helix-turn-helix domain-containing protein	NA	A0A077SK06	Escherichia_phage	32.2	6.3e-17
SQH26483.1|644481_645393_+	1-phosphofructokinase	NA	NA	NA	NA	NA
SQH26484.1|645389_647336_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA	NA
SQH26485.1|647434_648028_+	N-acetylmuramidase	NA	A0A249Y0X5	Enterococcus_phage	33.8	3.5e-11
SQH26486.1|648179_648887_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q332B8	Clostridium_botulinum_C_phage	36.4	6.5e-12
SQH26487.1|649042_649162_-|transposase	degenerate transposase	transposase	NA	NA	NA	NA
SQH26488.1|649458_650133_-	exotoxin J	NA	NA	NA	NA	NA
SQH26489.1|650297_651044_-	Exotoxin type C precursor	NA	Q938J1	Temperate_phage	82.4	4.0e-113
SQH26490.1|651162_652182_-|protease	igG-degrading protease	protease	NA	NA	NA	NA
SQH26491.1|652685_652862_+	nucleoside diphosphate kinase	NA	NA	NA	NA	NA
SQH26492.1|653089_653470_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26493.1|653469_654318_+	degV family protein	NA	NA	NA	NA	NA
SQH26494.1|654442_655651_+|head	poly A polymerase head domain-containing protein	head	H7BUW3	unidentified_phage	45.0	6.9e-38
SQH26495.1|655647_657525_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.5	6.7e-64
SQH26496.1|658404_658815_+	polypeptide deformylase family protein	NA	E3SLL2	Synechococcus_phage	30.6	6.9e-06
SQH26497.1|658895_660908_-	5'-nucleotidase	NA	NA	NA	NA	NA
SQH26498.1|661127_661778_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
SQH26499.1|661780_662449_+	two-component response regulator	NA	W8CYM9	Bacillus_phage	28.8	2.3e-19
SQH26500.1|662457_663690_+	two component system histidine kinase	NA	NA	NA	NA	NA
SQH26501.1|663983_664862_+	mevalonate kinase	NA	NA	NA	NA	NA
SQH26502.1|664843_665788_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
SQH26503.1|665780_666788_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
SQH26504.1|666780_667770_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA	NA
SQH26505.1|667999_669277_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
SQH26506.1|669263_670439_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQH26507.1|670647_671487_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	53.2	1.7e-83
SQH26508.1|671566_672064_+	dihydrofolate reductase	NA	W5QU76	Bacillus_phage	34.4	8.6e-11
SQH26509.1|672083_672254_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQH26510.1|672383_673613_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.5	7.8e-138
>prophage 4
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	975050	1054513	1756874	integrase,transposase,tRNA,protease	Enterococcus_phage(15.79%)	77	1010309:1010325	1059064:1059080
SQH26797.1|975050_975314_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26798.1|975332_976037_+|transposase	transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.4	1.3e-28
SQH26799.1|976327_976486_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26800.1|976550_977534_-	alpha/beta fold family hydrolase	NA	NA	NA	NA	NA
SQH26801.1|977564_978815_-	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA	NA
SQH26802.1|978807_979047_-	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA	NA
SQH26803.1|979064_980321_-	Protein dltB	NA	NA	NA	NA	NA
SQH26804.1|980317_981856_-	D-alanine--poly(phosphoribitol) ligase subunit 1	NA	A0A2K9KZV5	Tupanvirus	28.2	5.0e-41
SQH26805.1|981867_982011_-	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA	NA
SQH26806.1|982274_984266_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
SQH26807.1|984458_986633_+	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA	NA
SQH26808.1|986632_987373_+	glutamine transport ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.1	1.5e-35
SQH26809.1|987520_987673_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH26810.1|987669_989784_-	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQH26811.1|989889_990846_-	outer surface protein	NA	NA	NA	NA	NA
SQH26812.1|990800_990989_-	outer surface protein	NA	NA	NA	NA	NA
SQH26813.1|990997_992398_-	beta-glucosidase	NA	NA	NA	NA	NA
SQH26814.1|992622_993318_+	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
SQH26815.1|993322_993481_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQH26816.1|993549_994863_-	GTPase ObgE	NA	NA	NA	NA	NA
SQH26817.1|994919_995048_-	membrane protein	NA	NA	NA	NA	NA
SQH26818.1|995289_995805_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26819.1|995825_996632_+|transposase	transposase, IS861	transposase	A0A1B1P773	Bacillus_phage	50.0	1.1e-63
SQH26820.1|996920_997793_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA	NA
SQH26821.1|998016_999327_+	membrane protein	NA	NA	NA	NA	NA
SQH26822.1|999404_999698_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26823.1|999730_1000027_+	DNA-binding protein	NA	NA	NA	NA	NA
SQH26824.1|1000129_1000453_+|transposase	transposase	transposase	U5P429	Shigella_phage	41.9	3.6e-18
SQH26825.1|1000469_1001201_-	16S pseudouridylate synthase	NA	NA	NA	NA	NA
SQH26826.1|1001315_1001681_+	thioesterase superfamily protein	NA	NA	NA	NA	NA
SQH26827.1|1001800_1003021_-	sugar (and other) transporter family protein	NA	NA	NA	NA	NA
SQH26828.1|1003394_1004879_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQH26829.1|1004983_1005385_-	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA	NA
SQH26830.1|1005469_1005898_-	phosphorylase superfamily protein	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	74.1	1.6e-61
SQH26831.1|1006010_1006121_-	phosphorylase Pnp/Udp family protein	NA	NA	NA	NA	NA
SQH26832.1|1006159_1007515_-|tRNA	tRNA (uracil-5-)-methyltransferase	tRNA	D0R096	Streptococcus_phage	98.2	8.0e-253
SQH26833.1|1007596_1009048_-	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA	NA
SQH26834.1|1009255_1009747_-	shikimate kinase	NA	NA	NA	NA	NA
SQH26835.1|1009739_1011023_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
1010309:1010325	attL	AAAAAGCTGCACTAGAA	NA	NA	NA	NA
SQH26836.1|1011133_1012099_-	ribonuclease BN-like family protein	NA	NA	NA	NA	NA
SQH26837.1|1012100_1012961_-	methionine aminopeptidase Map	NA	NA	NA	NA	NA
SQH26838.1|1012976_1014260_-	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA	NA
SQH26839.1|1014268_1014811_-	acetyltransferase family protein	NA	NA	NA	NA	NA
SQH26840.1|1015048_1015786_-	protein G-related alpha 2M-binding protein	NA	NA	NA	NA	NA
SQH26841.1|1016142_1017402_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQH26842.1|1017575_1018772_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	65.4	4.5e-138
SQH26843.1|1019308_1021687_-	leucine Rich Repeat family protein	NA	NA	NA	NA	NA
SQH26844.1|1021890_1022832_+	biotin-protein ligase	NA	NA	NA	NA	NA
SQH26845.1|1023104_1024775_-	DNA polymerase III subunits gamma and tau	NA	E7DN81	Pneumococcus_phage	40.6	5.1e-47
SQH26846.1|1024774_1025272_-	GAF domain-containing protein	NA	NA	NA	NA	NA
SQH26847.1|1025416_1026226_+	membrane protein	NA	NA	NA	NA	NA
SQH26849.1|1026622_1027249_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.7	2.2e-35
SQH26850.1|1027346_1028432_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	1.6e-33
SQH26852.1|1028541_1029816_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
SQH26853.1|1029910_1031338_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQH26854.1|1031522_1033256_-	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA	NA
SQH26856.1|1033260_1033524_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA	NA
SQH26857.1|1033916_1034135_+	glutaredoxin	NA	A0A249XUR7	Enterococcus_phage	49.3	1.1e-13
SQH26859.1|1034154_1036314_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	64.0	8.6e-265
SQH26861.1|1036517_1037477_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.5	3.7e-127
SQH26863.1|1037451_1038765_+	chloride channel protein	NA	NA	NA	NA	NA
SQH26865.1|1038902_1039196_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH26867.1|1039228_1039525_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	42.0	6.5e-06
SQH26868.1|1039627_1039798_+|integrase	integrase	integrase	U5P429	Shigella_phage	46.3	1.1e-07
SQH26870.1|1039837_1040059_+|transposase	transposase	transposase	A4JX31	Burkholderia_virus	40.9	1.5e-07
SQH26872.1|1040150_1040846_-|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQH26873.1|1040864_1041626_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQH26874.1|1041622_1041838_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
SQH26875.1|1042198_1044817_-|tRNA	Alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	33.9	1.1e-61
SQH26876.1|1045203_1046259_-	foldase protein prsA 1	NA	NA	NA	NA	NA
SQH26877.1|1046321_1046993_-	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	27.2	1.9e-08
SQH26878.1|1047094_1048291_-	major facilitator superfamily protein	NA	NA	NA	NA	NA
SQH26879.1|1048667_1050473_-	oligoendopeptidase F	NA	NA	NA	NA	NA
SQH26880.1|1050485_1051448_-	competence CoiA-like family protein	NA	NA	NA	NA	NA
SQH26881.1|1051743_1052460_-	16S pseudouridylate synthetase	NA	NA	NA	NA	NA
SQH26882.1|1052578_1053283_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
SQH26883.1|1053484_1054513_+|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
1059064:1059080	attR	AAAAAGCTGCACTAGAA	NA	NA	NA	NA
>prophage 5
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	1366568	1414873	1756874	tail,terminase,portal	Streptococcus_phage(69.23%)	62	NA	NA
SQH27258.1|1366568_1369397_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.7	5.9e-306
SQH27259.1|1369622_1369805_-	paratox	NA	A3F673	Streptococcus_phage	83.3	4.4e-21
SQH27260.1|1370042_1370843_+	streptodornase	NA	NA	NA	NA	NA
SQH27261.1|1371114_1371549_+	phage membrane protein	NA	NA	NA	NA	NA
SQH27262.1|1371598_1372465_-	phage protein	NA	Q938J2	Temperate_phage	99.7	1.1e-133
SQH27263.1|1372452_1372977_-	phage protein	NA	Q938J3	Temperate_phage	100.0	4.0e-99
SQH27264.1|1373116_1374319_-	phage associated protein	NA	Q938J4	Temperate_phage	100.0	3.3e-242
SQH27265.1|1374315_1374426_-	phage membrane protein	NA	A7J2B4	Streptococcus_phage	97.2	1.8e-09
SQH27266.1|1374429_1374615_-	phage protein	NA	Q938J5	Temperate_phage	100.0	1.7e-25
SQH27267.1|1374611_1374908_-	phage protein	NA	Q938J6	Temperate_phage	100.0	7.5e-47
SQH27268.1|1374918_1375530_-	phage protein	NA	Q938J7	Temperate_phage	100.0	2.7e-91
SQH27269.1|1375532_1375964_-	phage protein	NA	Q938J8	Temperate_phage	99.3	5.2e-73
SQH27271.1|1375975_1377991_-	Phage infection protein	NA	Q938J9	Temperate_phage	84.2	3.2e-213
SQH27273.1|1378000_1379113_-	phage hyaluronidase	NA	A7J2A8	Streptococcus_phage	73.3	8.4e-123
SQH27275.1|1379112_1381095_-	phage protein	NA	A7J2A7	Streptococcus_phage	94.5	0.0e+00
SQH27277.1|1381104_1381947_-	phage protein	NA	A7J2A6	Streptococcus_phage	99.6	8.5e-160
SQH27279.1|1381958_1386341_-|tail	phage minor tail protein	tail	A7J2A5	Streptococcus_phage	76.4	3.2e-226
SQH27281.1|1386355_1386589_-	phage protein	NA	A7J2A4	Streptococcus_phage	100.0	4.4e-34
SQH27282.1|1386663_1387119_-	phage protein	NA	A7J2A3	Streptococcus_phage	100.0	8.3e-77
SQH27284.1|1387172_1387772_-|tail	phage major tail protein	tail	A7J2A2	Streptococcus_phage	98.9	4.1e-92
SQH27286.1|1387783_1388143_-	phage protein	NA	A7J2A1	Streptococcus_phage	97.5	6.8e-58
SQH27288.1|1388146_1388491_-	phage protein	NA	A7J2A0	Streptococcus_phage	99.1	6.1e-56
SQH27290.1|1388487_1388766_-	phage protein	NA	A7J299	Streptococcus_phage	98.9	4.2e-47
SQH27292.1|1388776_1389133_-	phage protein	NA	A7J298	Streptococcus_phage	97.5	2.8e-56
SQH27294.1|1389144_1390032_-	phage protein	NA	A7J297	Streptococcus_phage	99.7	3.6e-161
SQH27296.1|1390044_1390614_-	phage protein	NA	A7J296	Streptococcus_phage	97.9	2.6e-80
SQH27297.1|1390769_1391036_-	phage protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	88.6	1.7e-34
SQH27299.1|1391038_1391155_-	phage membrane protein	NA	A7J294	Streptococcus_phage	97.4	3.0e-07
SQH27301.1|1391257_1392703_-	phage protein	NA	A7J293	Streptococcus_phage	92.9	3.4e-257
SQH27303.1|1392662_1394195_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	98.2	1.3e-286
SQH27305.1|1394210_1395488_-|terminase	terminase large subunit	terminase	A7J291	Streptococcus_phage	97.6	1.3e-241
SQH27307.1|1395477_1395930_-|terminase	phage terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
SQH27308.1|1396019_1396436_-	phage protein	NA	A7J289	Streptococcus_phage	100.0	6.6e-73
SQH27310.1|1396432_1396624_-	phage protein	NA	NA	NA	NA	NA
SQH27312.1|1396774_1397464_-	DNA methylase family protein	NA	A0A1W6JMZ7	Lactococcus_phage	71.9	9.5e-101
SQH27314.1|1397472_1397739_-	phage protein	NA	A7J287	Streptococcus_phage	65.2	5.4e-20
SQH27316.1|1397735_1397903_-	phage protein	NA	A7J285	Streptococcus_phage	94.5	1.9e-23
SQH27318.1|1397903_1399226_-	SNF2 family phage protein	NA	A7J284	Streptococcus_phage	98.4	1.9e-254
SQH27319.1|1399222_1399498_-	phage protein	NA	A7J283	Streptococcus_phage	100.0	9.1e-47
SQH27321.1|1399884_1402269_-	phage DNA primase/helicase protein	NA	A7J282	Streptococcus_phage	94.4	4.1e-276
SQH27323.1|1402273_1404196_-	phage DNA polymerase	NA	A7J280	Streptococcus_phage	96.7	0.0e+00
SQH27325.1|1404238_1404796_-	phage protein	NA	D2J040	Enterococcus_phage	57.9	2.5e-51
SQH27326.1|1404806_1405205_-	phage protein	NA	NA	NA	NA	NA
SQH27327.1|1405208_1406363_-	phage protein	NA	A7J278	Streptococcus_phage	91.9	4.5e-204
SQH27329.1|1406362_1406662_-	phage protein	NA	A7J277	Streptococcus_phage	100.0	1.8e-43
SQH27330.1|1406749_1406953_-	phage protein	NA	A7J276	Streptococcus_phage	95.5	2.3e-31
SQH27332.1|1406949_1407102_-	phage protein	NA	A7J275	Streptococcus_phage	92.0	4.1e-17
SQH27334.1|1407098_1407485_-	phage protein	NA	A7J274	Streptococcus_phage	88.2	3.1e-56
SQH27336.1|1407481_1407685_-	phage protein	NA	NA	NA	NA	NA
SQH27338.1|1407677_1407848_-	phage protein	NA	A7J273	Streptococcus_phage	89.3	6.9e-21
SQH27340.1|1407844_1408120_-	phage protein	NA	A7J272	Streptococcus_phage	95.6	5.9e-46
SQH27341.1|1408181_1408397_-	phage protein	NA	M1Q1B4	Streptococcus_phage	76.8	4.2e-23
SQH27343.1|1408444_1408858_+	phage protein	NA	NA	NA	NA	NA
SQH27345.1|1408838_1408994_-	phage protein	NA	NA	NA	NA	NA
SQH27347.1|1409319_1409670_+	Cro/CI family phage transcriptional regulator	NA	Q938N6	Temperate_phage	73.5	4.3e-41
SQH27349.1|1409683_1410064_+	phage protein	NA	Q938N7	Temperate_phage	100.0	5.3e-69
SQH27351.1|1410074_1410596_+	phage protein	NA	Q938N8	Temperate_phage	100.0	2.3e-67
SQH27353.1|1410771_1411869_+	DNA integration/recombination/inversion protein	NA	Q938N9	Temperate_phage	98.1	1.6e-203
SQH27355.1|1412112_1413057_+	magnesium and cobalt transport protein	NA	NA	NA	NA	NA
SQH27357.1|1413189_1413846_+	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQH27359.1|1413978_1414218_-	SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent	NA	NA	NA	NA	NA
SQH27361.1|1414381_1414873_-	single strand binding protein	NA	A0A286QNX2	Streptococcus_phage	74.2	1.3e-59
>prophage 6
LS483430	Streptococcus pyogenes strain NCTC12044 genome assembly, chromosome: 1	1756874	1675171	1694932	1756874		Streptococcus_phage(56.25%)	24	NA	NA
SQH27786.1|1675171_1676392_-	transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.6	3.5e-05
SQH27788.1|1676402_1678385_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	1.7e-62
SQH27790.1|1678479_1679625_-	DNA integration/recombination/inversion protein	NA	A0A1X9I5Y5	Streptococcus_phage	44.9	7.9e-84
SQH27792.1|1680905_1681586_-	Cro/CI family transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	47.9	1.3e-33
SQH27794.1|1681749_1681947_+	HTH DNA-binding protein	NA	A0A1X9I5U5	Streptococcus_phage	63.1	1.3e-15
SQH27795.1|1681960_1682569_+	Phage antirepressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	46.9	1.0e-42
SQH27797.1|1682589_1682997_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
SQH27799.1|1683009_1683132_+	phage protein	NA	NA	NA	NA	NA
SQH27801.1|1683414_1683936_+	phage protein	NA	R9QNB1	Lactococcus_phage	40.2	7.4e-21
SQH27803.1|1684180_1684522_+	phage protein	NA	NA	NA	NA	NA
SQH27805.1|1684508_1684730_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH27807.1|1684732_1684924_+	phage protein	NA	NA	NA	NA	NA
SQH27809.1|1684935_1685265_+	phage protein	NA	NA	NA	NA	NA
SQH27811.1|1685267_1685540_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
SQH27813.1|1685540_1686398_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	75.2	2.4e-125
SQH27815.1|1686366_1688055_+	phage/plasmid primase, P4 family, C-terminal domain protein	NA	A0A1X9I717	Streptococcus_phage	81.8	6.1e-258
SQH27817.1|1688341_1688515_+	Uncharacterised protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
SQH27819.1|1688695_1689205_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.1e-29
SQH27821.1|1689278_1689767_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.3	2.0e-44
SQH27822.1|1690170_1690533_+	phage protein	NA	NA	NA	NA	NA
SQH27824.1|1690507_1690891_+	phage protein	NA	Q938L8	Temperate_phage	40.2	6.4e-14
SQH27826.1|1691096_1691735_+	phage protein	NA	NA	NA	NA	NA
SQH27827.1|1691734_1691965_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH27829.1|1692376_1694932_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	23.3	6.8e-43
